RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 KRTAP10-4P60372 401 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-213ENST00000540725 MPV17L2Q567V2 206 aa9.2□□□□□ -0.94
SNHG1-213ENST00000540725 ZNF471Q9BX82 626 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-213ENST00000540725 A0A1B0GV50 99 aa9.19□□□□□ -0.94
SNHG1-213ENST00000540725 SCO2A0A1W2PP80 73 aa9.19□□□□□ -0.94
SNHG1-213ENST00000540725 SNAI2O43623 268 aa9.19□□□□□ -0.94
SNHG1-213ENST00000540725 ANGP03950 147 aaKnown RBP9.19□□□□□ -0.94
SNHG1-213ENST00000540725 SFT2D1Q8WV19 159 aa9.19□□□□□ -0.94
SNHG1-213ENST00000540725 MLST8Q9BVC4 326 aa9.19□□□□□ -0.94
SNHG1-213ENST00000540725 MED9Q9NWA0 146 aa9.19□□□□□ -0.94
SNHG1-213ENST00000540725 PKHD1L1Q86WI1 4243 aa9.19□□□□□ -0.94
SNHG1-213ENST00000540725 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
SNHG1-213ENST00000540725 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
SNHG1-213ENST00000540725 ZNF345Q14585 488 aa9.18□□□□□ -0.94
SNHG1-213ENST00000540725 SPANXN1Q5VSR9 72 aa9.18□□□□□ -0.94
SNHG1-213ENST00000540725 BAGE2Q86Y30 109 aa9.18□□□□□ -0.94
SNHG1-213ENST00000540725 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.18□□□□□ -0.94
SNHG1-213ENST00000540725 FAM213BQ8TBF2 198 aa9.18□□□□□ -0.94
SNHG1-213ENST00000540725 MBD3L1Q8WWY6 194 aa9.18□□□□□ -0.94
SNHG1-213ENST00000540725 CHCHD5Q9BSY4 110 aa9.18□□□□□ -0.94
SNHG1-213ENST00000540725 SSBP4Q9BWG4 385 aaPredicted RBP9.18□□□□□ -0.94
SNHG1-213ENST00000540725 A0A0D9SG52 128 aa9.17□□□□□ -0.94
SNHG1-213ENST00000540725 USP17L23D6RBM5 183 aa9.17□□□□□ -0.94
SNHG1-213ENST00000540725 F5H697 171 aa9.17□□□□□ -0.94
SNHG1-213ENST00000540725 IGLV2-8P01709 118 aa9.17□□□□□ -0.94
SNHG1-213ENST00000540725 HLA-DQA1P01909 254 aa9.17□□□□□ -0.94
SNHG1-213ENST00000540725 OR5AL1P0C617 328 aa9.17□□□□□ -0.94
SNHG1-213ENST00000540725 RAB14P61106 215 aa9.17□□□□□ -0.94
SNHG1-213ENST00000540725 PKIAP61925 76 aa9.17□□□□□ -0.94
SNHG1-213ENST00000540725 KCNRGQ8N5I3 272 aa9.17□□□□□ -0.94
SNHG1-213ENST00000540725 UMAD1C9J7I0 102 aa9.16□□□□□ -0.94
SNHG1-213ENST00000540725 MIAQ16674 131 aa9.16□□□□□ -0.94
SNHG1-213ENST00000540725 NTM-AS1Q6ZSK4 140 aa9.16□□□□□ -0.94
SNHG1-213ENST00000540725 TMUB2Q71RG4 321 aa9.16□□□□□ -0.94
SNHG1-213ENST00000540725 SSTP61278 116 aa9.15□□□□□ -0.94
SNHG1-213ENST00000540725 TMEM97Q5BJF2 176 aa9.15□□□□□ -0.94
SNHG1-213ENST00000540725 SLC51BQ86UW2 128 aa9.15□□□□□ -0.94
SNHG1-213ENST00000540725 VAX2Q9UIW0 290 aa9.15□□□□□ -0.94
SNHG1-213ENST00000540725 HMCN2Q8NDA2 5059 aa9.14□□□□□ -0.95
SNHG1-213ENST00000540725 SMIM17P0DL12 118 aa9.14□□□□□ -0.95
SNHG1-213ENST00000540725 AP1S3Q96PC3 154 aa9.14□□□□□ -0.95
SNHG1-213ENST00000540725 KIF25-AS1Q9Y6Z4 181 aa9.14□□□□□ -0.95
SNHG1-213ENST00000540725 OXTP01178 125 aa9.13□□□□□ -0.95
SNHG1-213ENST00000540725 PRSS1P07477 247 aa9.13□□□□□ -0.95
SNHG1-213ENST00000540725 H2AFB1P0C5Y9 115 aa9.13□□□□□ -0.95
SNHG1-213ENST00000540725 RBX1P62877 108 aa9.13□□□□□ -0.95
SNHG1-213ENST00000540725 CLPSL2Q6UWE3 100 aa9.13□□□□□ -0.95
SNHG1-213ENST00000540725 DERL1Q9BUN8 251 aa9.13□□□□□ -0.95
SNHG1-213ENST00000540725 PRR34Q9NV39 138 aa9.13□□□□□ -0.95
SNHG1-213ENST00000540725 TRBV25-1A0A075B6N4 114 aa9.12□□□□□ -0.95
SNHG1-213ENST00000540725 RPL35P42766 123 aaKnown RBP9.12□□□□□ -0.95
SNHG1-213ENST00000540725 GAGE6Q13070 117 aa9.12□□□□□ -0.95
SNHG1-213ENST00000540725 BCL2L11O43521 198 aa9.12□□□□□ -0.95
SNHG1-213ENST00000540725 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
SNHG1-213ENST00000540725 SERTAD4-AS1Q5TG53 156 aa9.12□□□□□ -0.95
SNHG1-213ENST00000540725 DGAT2L7PQ6IED9 249 aa9.12□□□□□ -0.95
SNHG1-213ENST00000540725 KRTAP26-1Q6PEX3 210 aa9.12□□□□□ -0.95
SNHG1-213ENST00000540725 LINC00269Q8N2A0 174 aa9.12□□□□□ -0.95
SNHG1-213ENST00000540725 C9orf163Q8N9P6 203 aa9.12□□□□□ -0.95
SNHG1-213ENST00000540725 KANTRA0A1W2PQU2 76 aa9.11□□□□□ -0.95
SNHG1-213ENST00000540725 MGPP08493 103 aa9.11□□□□□ -0.95
SNHG1-213ENST00000540725 GZMBP10144 247 aa9.11□□□□□ -0.95
SNHG1-213ENST00000540725 IQCJQ1A5X6 159 aa9.11□□□□□ -0.95
SNHG1-213ENST00000540725 C11orf52Q96A22 123 aa9.11□□□□□ -0.95
SNHG1-213ENST00000540725 IGHV1-24A0A0C4DH33 117 aa9.1□□□□□ -0.95
SNHG1-213ENST00000540725 M0QY20 66 aa9.1□□□□□ -0.95
SNHG1-213ENST00000540725 IGLC6P0CF74 106 aa9.1□□□□□ -0.95
SNHG1-213ENST00000540725 TPPP3Q9BW30 176 aa9.1□□□□□ -0.95
SNHG1-213ENST00000540725 MANBALQ9NQG1 85 aa9.1□□□□□ -0.95
SNHG1-213ENST00000540725 H7C1H1 209 aa9.09□□□□□ -0.95
SNHG1-213ENST00000540725 EIF5AP63241 154 aaKnown RBP9.09□□□□□ -0.95
SNHG1-213ENST00000540725 CCL20P78556 96 aa9.09□□□□□ -0.95
SNHG1-213ENST00000540725 CENPWQ5EE01 88 aa9.09□□□□□ -0.95
SNHG1-213ENST00000540725 SUMO4Q6EEV6 95 aa9.09□□□□□ -0.95
SNHG1-213ENST00000540725 COMMD7Q86VX2 200 aa9.09□□□□□ -0.95
SNHG1-213ENST00000540725 FER1L6-AS1Q8NA97 138 aa9.09□□□□□ -0.95
SNHG1-213ENST00000540725 OR2D3Q8NGH3 330 aa9.09□□□□□ -0.95
SNHG1-213ENST00000540725 GNG13Q9P2W3 67 aa9.09□□□□□ -0.95
SNHG1-213ENST00000540725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-213ENST00000540725 IGLV10-54A0A075B6I4 117 aa9.08□□□□□ -0.96
SNHG1-213ENST00000540725 RPS20P60866 119 aaKnown RBP9.08□□□□□ -0.96
SNHG1-213ENST00000540725 REG3AQ06141 175 aa9.08□□□□□ -0.96
SNHG1-213ENST00000540725 DAZAP1Q96EP5 407 aaKnown RBP9.08□□□□□ -0.96
SNHG1-213ENST00000540725 PANO1I0J062 215 aa9.07□□□□□ -0.96
SNHG1-213ENST00000540725 HNRNPA3P51991 378 aaKnown RBP9.07□□□□□ -0.96
SNHG1-213ENST00000540725 CACNG7P62955 275 aa9.07□□□□□ -0.96
SNHG1-213ENST00000540725 SDIM1Q6ZPB5 146 aa9.07□□□□□ -0.96
SNHG1-213ENST00000540725 C20orf203Q8NBC4 194 aa9.07□□□□□ -0.96
SNHG1-213ENST00000540725 CLRN3Q8NCR9 226 aa9.07□□□□□ -0.96
SNHG1-213ENST00000540725 TRAV1-1A0A0B4J248 108 aa9.06□□□□□ -0.96
SNHG1-213ENST00000540725 C19orf71A6NCJ1 209 aa9.06□□□□□ -0.96
SNHG1-213ENST00000540725 RASL11AQ6T310 242 aa9.06□□□□□ -0.96
SNHG1-213ENST00000540725 TMEM243Q9BU79 118 aa9.06□□□□□ -0.96
SNHG1-213ENST00000540725 TRAV8-4A0A0B4J246 113 aa9.05□□□□□ -0.96
SNHG1-213ENST00000540725 RAB19A4D1S5 217 aa9.05□□□□□ -0.96
SNHG1-213ENST00000540725 P01737 135 aa9.05□□□□□ -0.96
SNHG1-213ENST00000540725 CNBPP62633 177 aaKnown RBP9.05□□□□□ -0.96
SNHG1-213ENST00000540725 ALKAL2Q6UX46 152 aa9.05□□□□□ -0.96
SNHG1-213ENST00000540725 UBR4Q5T4S7 5183 aa9.05□□□□□ -0.96
SNHG1-213ENST00000540725 IGLV4-60A0A075B6I1 120 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 370.1 ms