RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 SH2D6Q7Z4S9 175 aa10.39□□□□□ -0.75
UBE3B-210ENST00000539599 SNRPD3P62318 126 aaKnown RBP10.38□□□□□ -0.75
UBE3B-210ENST00000539599 KHDC1LQ5JSQ8 128 aa10.38□□□□□ -0.75
UBE3B-210ENST00000539599 C11orf44Q8N8P7 122 aa10.38□□□□□ -0.75
UBE3B-210ENST00000539599 ZNF702PQ9H963 129 aa10.38□□□□□ -0.75
UBE3B-210ENST00000539599 CR1P17927 2039 aa10.38□□□□□ -0.75
UBE3B-210ENST00000539599 E9PLD3 99 aa10.38□□□□□ -0.75
UBE3B-210ENST00000539599 CEMP1Q6PRD7 247 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-210ENST00000539599 TCTEX1D4Q5JR98 221 aa10.37□□□□□ -0.75
UBE3B-210ENST00000539599 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
UBE3B-210ENST00000539599 KIR2DL4Q99706 377 aa10.37□□□□□ -0.75
UBE3B-210ENST00000539599 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
UBE3B-210ENST00000539599 M0QY20 66 aa10.37□□□□□ -0.75
UBE3B-210ENST00000539599 COX6B1P14854 86 aa10.37□□□□□ -0.75
UBE3B-210ENST00000539599 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
UBE3B-210ENST00000539599 APOMO95445 188 aa10.37□□□□□ -0.75
UBE3B-210ENST00000539599 DEFB131AP59861 70 aa10.37□□□□□ -0.75
UBE3B-210ENST00000539599 SRSF9Q13242 221 aaKnown RBP eCLIP10.36□□□□□ -0.75
UBE3B-210ENST00000539599 VPREB3Q9UKI3 123 aa10.36□□□□□ -0.75
UBE3B-210ENST00000539599 SETXQ7Z333 2677 aaKnown RBP10.36□□□□□ -0.75
UBE3B-210ENST00000539599 RBMY1BA6NDE4 496 aaKnown RBP10.36□□□□□ -0.75
UBE3B-210ENST00000539599 RBMY1EA6NEQ0 496 aaKnown RBP10.36□□□□□ -0.75
UBE3B-210ENST00000539599 G3V4G9 280 aa10.36□□□□□ -0.75
UBE3B-210ENST00000539599 VCYO14598 125 aa10.36□□□□□ -0.75
UBE3B-210ENST00000539599 RBMY1DP0C7P1 496 aaKnown RBP10.36□□□□□ -0.75
UBE3B-210ENST00000539599 OR5A1Q8NGJ0 315 aa10.36□□□□□ -0.75
UBE3B-210ENST00000539599 PGPEP1Q9NXJ5 209 aa10.36□□□□□ -0.75
UBE3B-210ENST00000539599 LINC01549A6NIU2 74 aa10.35□□□□□ -0.75
UBE3B-210ENST00000539599 PMVKQ15126 192 aa10.35□□□□□ -0.75
UBE3B-210ENST00000539599 TENM4Q6N022 2769 aa10.35□□□□□ -0.75
UBE3B-210ENST00000539599 TRBV7-9A0A0J9YWB2 115 aa10.34□□□□□ -0.75
UBE3B-210ENST00000539599 LGALS9O00182 355 aa10.34□□□□□ -0.75
UBE3B-210ENST00000539599 INSL3P51460 131 aa10.34□□□□□ -0.75
UBE3B-210ENST00000539599 ETDBQ3ZM63 59 aa10.34□□□□□ -0.75
UBE3B-210ENST00000539599 FOXI2Q6ZQN5 318 aa10.34□□□□□ -0.75
UBE3B-210ENST00000539599 ADARB2-AS1A8MUL3 147 aa10.34□□□□□ -0.75
UBE3B-210ENST00000539599 RRN3P1Q2M238 152 aa10.34□□□□□ -0.75
UBE3B-210ENST00000539599 IGHV4-31P0DP07 118 aa10.33□□□□□ -0.76
UBE3B-210ENST00000539599 Q6ZSN1 163 aa10.33□□□□□ -0.76
UBE3B-210ENST00000539599 TRBV27A0A0K0K1C4 114 aa10.33□□□□□ -0.76
UBE3B-210ENST00000539599 MRPL16Q9NX20 251 aaKnown RBP10.32□□□□□ -0.76
UBE3B-210ENST00000539599 HIST2H2BCQ6DN03 193 aa10.32□□□□□ -0.76
UBE3B-210ENST00000539599 TMEM61Q8N0U2 210 aa10.32□□□□□ -0.76
UBE3B-210ENST00000539599 IGHV3-38A0A0C4DH36 116 aa10.31□□□□□ -0.76
UBE3B-210ENST00000539599 A0A0J9YXV3 536 aa10.31□□□□□ -0.76
UBE3B-210ENST00000539599 A0A0J9YY99 117 aa10.31□□□□□ -0.76
UBE3B-210ENST00000539599 PPP1R17O96001 155 aa10.31□□□□□ -0.76
UBE3B-210ENST00000539599 Q6YL49 198 aa10.31□□□□□ -0.76
UBE3B-210ENST00000539599 LOC107984156A0A0G2JMH3 177 aa10.31□□□□□ -0.76
UBE3B-210ENST00000539599 GATA3P23771 443 aa10.31□□□□□ -0.76
UBE3B-210ENST00000539599 TAL2Q16559 108 aa10.31□□□□□ -0.76
UBE3B-210ENST00000539599 ARL17AQ8IVW1 177 aa10.31□□□□□ -0.76
UBE3B-210ENST00000539599 SPAG8Q99932 426 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-210ENST00000539599 SYT8Q8NBV8 401 aa10.31□□□□□ -0.76
UBE3B-210ENST00000539599 A0A1W2PRX2 142 aa10.3□□□□□ -0.76
UBE3B-210ENST00000539599 A8MZ25 164 aa10.3□□□□□ -0.76
UBE3B-210ENST00000539599 TSPAN13O95857 204 aa10.3□□□□□ -0.76
UBE3B-210ENST00000539599 Q5PR19 223 aa10.29□□□□□ -0.76
UBE3B-210ENST00000539599 DLX4Q92988 240 aaPredicted RBP10.29□□□□□ -0.76
UBE3B-210ENST00000539599 UBE2E2Q96LR5 201 aa10.29□□□□□ -0.76
UBE3B-210ENST00000539599 AMELXQ99217 191 aa10.29□□□□□ -0.76
UBE3B-210ENST00000539599 Q96MF0 132 aa10.29□□□□□ -0.76
UBE3B-210ENST00000539599 TIMM17AQ99595 171 aa10.29□□□□□ -0.76
UBE3B-210ENST00000539599 SPANXB1Q9NS25 103 aaPredicted RBP10.29□□□□□ -0.76
UBE3B-210ENST00000539599 ITPR2Q14571 2701 aa10.29□□□□□ -0.76
UBE3B-210ENST00000539599 IGHV3OR16-12A0A075B7B8 117 aa10.28□□□□□ -0.76
UBE3B-210ENST00000539599 TRPT1Q86TN4 253 aaKnown RBP10.28□□□□□ -0.76
UBE3B-210ENST00000539599 PTH2Q96A98 100 aa10.28□□□□□ -0.76
UBE3B-210ENST00000539599 TRBV6-5A0A0K0K1A5 114 aa10.28□□□□□ -0.76
UBE3B-210ENST00000539599 A0A1B0GWB2 263 aa10.28□□□□□ -0.76
UBE3B-210ENST00000539599 H7C2G1 150 aa10.28□□□□□ -0.76
UBE3B-210ENST00000539599 J3QQQ9 107 aa10.28□□□□□ -0.76
UBE3B-210ENST00000539599 DSCR9P59020 149 aa10.28□□□□□ -0.76
UBE3B-210ENST00000539599 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
UBE3B-210ENST00000539599 FAM104AQ969W3 186 aa10.28□□□□□ -0.76
UBE3B-210ENST00000539599 IGLV4-3A0A075B6K6 122 aa10.27□□□□□ -0.76
UBE3B-210ENST00000539599 TRAV8-3A0A0A6YYJ7 113 aa10.27□□□□□ -0.76
UBE3B-210ENST00000539599 ELANEP08246 267 aa10.27□□□□□ -0.76
UBE3B-210ENST00000539599 CD28P10747 220 aa10.27□□□□□ -0.76
UBE3B-210ENST00000539599 PSMB2P49721 201 aa10.27□□□□□ -0.76
UBE3B-210ENST00000539599 ZNF418Q8TF45 676 aaPredicted RBP10.27□□□□□ -0.76
UBE3B-210ENST00000539599 TMEM141Q96I45 108 aa10.27□□□□□ -0.76
UBE3B-210ENST00000539599 SPXQ9BT56 116 aa10.27□□□□□ -0.76
UBE3B-210ENST00000539599 PRO0461Q9UI25 63 aa10.27□□□□□ -0.76
UBE3B-210ENST00000539599 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.27□□□□□ -0.77
UBE3B-210ENST00000539599 IGKV2-29A2NJV5 120 aaPredicted RBP10.27□□□□□ -0.77
UBE3B-210ENST00000539599 H3BMM0 161 aa10.27□□□□□ -0.77
UBE3B-210ENST00000539599 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
UBE3B-210ENST00000539599 COTL1Q14019 142 aa10.27□□□□□ -0.77
UBE3B-210ENST00000539599 HERVK_113P61574 105 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 RPL32P62910 135 aaKnown RBP10.26□□□□□ -0.77
UBE3B-210ENST00000539599 GAGE13Q4V321 117 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 ODF3Q96PU9 254 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 TSSC4Q9Y5U2 329 aaPredicted RBP10.26□□□□□ -0.77
UBE3B-210ENST00000539599 I3L3M4 83 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 FSHBP01225 129 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 ZNF22P17026 224 aaPredicted RBP10.26□□□□□ -0.77
UBE3B-210ENST00000539599 SMCPP49901 116 aaPredicted RBP10.26□□□□□ -0.77
UBE3B-210ENST00000539599 UBE2D1P51668 147 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms