RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ADARB2-AS1A8MUL3 147 aa15.07■□□□□ 0
TMEM260-203ENST00000539559 PAPPA-AS1Q5QFB9 102 aa15.07■□□□□ 0
TMEM260-203ENST00000539559 ZNF843Q8N446 348 aa15.07■□□□□ 0
TMEM260-203ENST00000539559 PPDPFLQ8WWR9 84 aa15.07■□□□□ 0
TMEM260-203ENST00000539559 TIMM17AQ99595 171 aa15.07■□□□□ 0
TMEM260-203ENST00000539559 PRO1854Q9UHT4 67 aa15.07■□□□□ 0
TMEM260-203ENST00000539559 IGHV4-61A0A0C4DH41 118 aa15.07■□□□□ 0
TMEM260-203ENST00000539559 TMEM141Q96I45 108 aa15.07■□□□□ 0
TMEM260-203ENST00000539559 GEMIN7Q9H840 131 aaKnown RBP15.07■□□□□ 0
TMEM260-203ENST00000539559 CRYBA4P53673 196 aa15.06■□□□□ 0
TMEM260-203ENST00000539559 A8MWV9 139 aa15.06■□□□□ 0
TMEM260-203ENST00000539559 C10orf99Q6UWK7 81 aa15.06■□□□□ 0
TMEM260-203ENST00000539559 P0DMU3 169 aa15.05■□□□□ 0
TMEM260-203ENST00000539559 FAM231AP0DMU4 169 aa15.05■□□□□ 0
TMEM260-203ENST00000539559 FAM231CP0DMU5 169 aa15.05■□□□□ 0
TMEM260-203ENST00000539559 DCANP1Q8TF63 244 aa15.05■□□□□ 0
TMEM260-203ENST00000539559 TRBV27A0A0K0K1C4 114 aa15.05■□□□□ -0
TMEM260-203ENST00000539559 IGHG2P01859 326 aa15.05■□□□□ -0
TMEM260-203ENST00000539559 TCTEX1D4Q5JR98 221 aa15.05■□□□□ -0
TMEM260-203ENST00000539559 Q8N1Y9 231 aa15.05■□□□□ -0
TMEM260-203ENST00000539559 USMG5Q96IX5 58 aa15.05■□□□□ -0
TMEM260-203ENST00000539559 A0A0J9YXV3 536 aa15.04■□□□□ -0
TMEM260-203ENST00000539559 ELANEP08246 267 aa15.04■□□□□ -0
TMEM260-203ENST00000539559 C9JAW5 83 aa15.04■□□□□ -0
TMEM260-203ENST00000539559 SPINK13Q1W4C9 94 aa15.04■□□□□ -0
TMEM260-203ENST00000539559 ZNF462Q96JM2 2506 aa15.04■□□□□ -0
TMEM260-203ENST00000539559 IGHV3-16A0A0C4DH30 117 aa15.03■□□□□ -0
TMEM260-203ENST00000539559 M0QY20 66 aa15.03■□□□□ -0
TMEM260-203ENST00000539559 MUSTN1Q8IVN3 82 aa15.03■□□□□ -0
TMEM260-203ENST00000539559 CSMD2Q7Z408 3487 aa15.03■□□□□ -0
TMEM260-203ENST00000539559 CREBBPQ92793 2442 aa15.03■□□□□ -0
TMEM260-203ENST00000539559 IGHV3-73A0A0B4J1V6 119 aa15.03■□□□□ -0
TMEM260-203ENST00000539559 LGALS9O00182 355 aa15.03■□□□□ -0
TMEM260-203ENST00000539559 RPL32P62910 135 aaKnown RBP15.03■□□□□ -0
TMEM260-203ENST00000539559 BEX4Q9NWD9 120 aaPredicted RBP15.03■□□□□ -0
TMEM260-203ENST00000539559 RNASE13Q5GAN3 156 aaKnown RBP15.02■□□□□ -0
TMEM260-203ENST00000539559 LYRM7Q5U5X0 104 aa15.02■□□□□ -0
TMEM260-203ENST00000539559 IGHV4-30-2A0A087WSY4 118 aa15.02□□□□□ -0.01
TMEM260-203ENST00000539559 HTN1P15515 57 aa15.02□□□□□ -0.01
TMEM260-203ENST00000539559 TMEM223A0PJW6 202 aa15.01□□□□□ -0.01
TMEM260-203ENST00000539559 ZNF22P17026 224 aaPredicted RBP15.01□□□□□ -0.01
TMEM260-203ENST00000539559 CEMP1Q6PRD7 247 aaPredicted RBP15.01□□□□□ -0.01
TMEM260-203ENST00000539559 TRBV20-1A0A075B6N2 111 aa15□□□□□ -0.01
TMEM260-203ENST00000539559 CUBNO60494 3623 aa15□□□□□ -0.01
TMEM260-203ENST00000539559 SLC25A20O43772 301 aa15□□□□□ -0.01
TMEM260-203ENST00000539559 PRM2P04554 102 aa15□□□□□ -0.01
TMEM260-203ENST00000539559 TRBV7-9A0A0J9YWB2 115 aa15□□□□□ -0.01
TMEM260-203ENST00000539559 IGHV3-33P01772 117 aa15□□□□□ -0.01
TMEM260-203ENST00000539559 ID1P41134 155 aa15□□□□□ -0.01
TMEM260-203ENST00000539559 Q1RN00 199 aa15□□□□□ -0.01
TMEM260-203ENST00000539559 C9orf85Q96MD7 179 aa15□□□□□ -0.01
TMEM260-203ENST00000539559 A6NDX4 124 aa14.99□□□□□ -0.01
TMEM260-203ENST00000539559 SBSPONQ8IVN8 264 aa14.99□□□□□ -0.01
TMEM260-203ENST00000539559 TMEM263Q8WUH6 116 aaKnown RBP14.99□□□□□ -0.01
TMEM260-203ENST00000539559 DUX5Q96PT3 197 aa14.99□□□□□ -0.01
TMEM260-203ENST00000539559 SPXQ9BT56 116 aa14.99□□□□□ -0.01
TMEM260-203ENST00000539559 PROK1P58294 105 aa14.99□□□□□ -0.01
TMEM260-203ENST00000539559 TRBV6-5A0A0K0K1A5 114 aa14.98□□□□□ -0.01
TMEM260-203ENST00000539559 RHODO00212 210 aa14.98□□□□□ -0.01
TMEM260-203ENST00000539559 LEPROTO15243 131 aa14.98□□□□□ -0.01
TMEM260-203ENST00000539559 GATA3P23771 443 aa14.98□□□□□ -0.01
TMEM260-203ENST00000539559 NRGNQ92686 78 aa14.98□□□□□ -0.01
TMEM260-203ENST00000539559 IGLV1-40P01703 118 aa14.98□□□□□ -0.01
TMEM260-203ENST00000539559 DSCR9P59020 149 aa14.98□□□□□ -0.01
TMEM260-203ENST00000539559 TRAV8-3A0A0A6YYJ7 113 aa14.97□□□□□ -0.01
TMEM260-203ENST00000539559 NPC2P61916 151 aa14.97□□□□□ -0.01
TMEM260-203ENST00000539559 ERG28Q9UKR5 140 aa14.97□□□□□ -0.01
TMEM260-203ENST00000539559 C20orf203Q8NBC4 194 aa14.97□□□□□ -0.01
TMEM260-203ENST00000539559 Q9UF83 564 aa14.97□□□□□ -0.01
TMEM260-203ENST00000539559 IGLV4-3A0A075B6K6 122 aa14.96□□□□□ -0.01
TMEM260-203ENST00000539559 A8MZ25 164 aa14.96□□□□□ -0.01
TMEM260-203ENST00000539559 RNF183Q96D59 192 aa14.96□□□□□ -0.01
TMEM260-203ENST00000539559 MSMBP08118 114 aa14.96□□□□□ -0.02
TMEM260-203ENST00000539559 NSUN5P1Q3KNT7 163 aa14.96□□□□□ -0.02
TMEM260-203ENST00000539559 VCX2Q9H322 139 aa14.96□□□□□ -0.02
TMEM260-203ENST00000539559 PRRC2AP48634 2157 aaKnown RBP14.96□□□□□ -0.02
TMEM260-203ENST00000539559 AVPP01185 164 aa14.95□□□□□ -0.02
TMEM260-203ENST00000539559 Q6ZSV7 163 aa14.95□□□□□ -0.02
TMEM260-203ENST00000539559 EPG5Q9HCE0 2579 aa14.95□□□□□ -0.02
TMEM260-203ENST00000539559 A0A0J9YX75 114 aa14.95□□□□□ -0.02
TMEM260-203ENST00000539559 H3BUA1 57 aa14.95□□□□□ -0.02
TMEM260-203ENST00000539559 IGHV1OR15-1A0A075B7D0 117 aa14.94□□□□□ -0.02
TMEM260-203ENST00000539559 PRSS2P07478 247 aa14.94□□□□□ -0.02
TMEM260-203ENST00000539559 NTN5Q8WTR8 489 aaPredicted RBP14.94□□□□□ -0.02
TMEM260-203ENST00000539559 A0A0J9YXY3 114 aa14.93□□□□□ -0.02
TMEM260-203ENST00000539559 KNCNA6PVL3 124 aa14.93□□□□□ -0.02
TMEM260-203ENST00000539559 FAM208BQ5VWN6 2430 aa14.93□□□□□ -0.02
TMEM260-203ENST00000539559 UTP20O75691 2785 aaKnown RBP14.93□□□□□ -0.02
TMEM260-203ENST00000539559 ZANQ9Y493 2812 aa14.92□□□□□ -0.02
TMEM260-203ENST00000539559 UBR5O95071 2799 aaPredicted RBP14.92□□□□□ -0.02
TMEM260-203ENST00000539559 B4DSR2 109 aa14.92□□□□□ -0.02
TMEM260-203ENST00000539559 I3L3M4 83 aa14.92□□□□□ -0.02
TMEM260-203ENST00000539559 IGHV3-30-3P0DP02 117 aa14.92□□□□□ -0.02
TMEM260-203ENST00000539559 RHOHQ15669 191 aa14.92□□□□□ -0.02
TMEM260-203ENST00000539559 LRRK2Q5S007 2527 aa14.91□□□□□ -0.02
TMEM260-203ENST00000539559 CD28P10747 220 aa14.91□□□□□ -0.02
TMEM260-203ENST00000539559 SYNJ2BPP57105 145 aa14.91□□□□□ -0.02
TMEM260-203ENST00000539559 CFHR3Q02985 330 aa14.91□□□□□ -0.02
TMEM260-203ENST00000539559 BRI3O95415 125 aa14.9□□□□□ -0.02
TMEM260-203ENST00000539559 RBMY1A1P0DJD3 496 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms