RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 SNRPEP62304 92 aaKnown RBP6.51□□□□□ -1.37
RTN4IP1-204ENST00000539449 PIK3CD-AS1Q5SR53 167 aa6.51□□□□□ -1.37
RTN4IP1-204ENST00000539449 LINC00612Q8N6U2 182 aa6.51□□□□□ -1.37
RTN4IP1-204ENST00000539449 NRACQ8N912 160 aa6.51□□□□□ -1.37
RTN4IP1-204ENST00000539449 ZNF479Q96JC4 524 aa6.51□□□□□ -1.37
RTN4IP1-204ENST00000539449 A8MWV9 139 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 F5H697 171 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 TNFRSF6BO95407 300 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 SMIM17P0DL12 118 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 P0DMU3 169 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 MIFP14174 115 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 Q0VG73 95 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 ZNF56Q15929 161 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 LGALS9BQ3B8N2 356 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 FAM222AQ5U5X8 452 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 ZFAND6Q6FIF0 208 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 ORMDL3Q8N138 153 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 TP53TG1Q9Y2A0 90 aa6.5□□□□□ -1.37
RTN4IP1-204ENST00000539449 ALMS1Q8TCU4 4167 aa6.49□□□□□ -1.37
RTN4IP1-204ENST00000539449 LOC389332A0A1B0GUA5 103 aa6.49□□□□□ -1.37
RTN4IP1-204ENST00000539449 C5orf52A6NGY3 159 aa6.49□□□□□ -1.37
RTN4IP1-204ENST00000539449 M0QY20 66 aa6.49□□□□□ -1.37
RTN4IP1-204ENST00000539449 DEFB130BP0DP73 79 aa6.49□□□□□ -1.37
RTN4IP1-204ENST00000539449 DEFB130AP0DP74 79 aa6.49□□□□□ -1.37
RTN4IP1-204ENST00000539449 COA6Q5JTJ3 125 aaKnown RBP6.49□□□□□ -1.37
RTN4IP1-204ENST00000539449 OR4C5Q8NGB2 326 aa6.49□□□□□ -1.37
RTN4IP1-204ENST00000539449 MRAP2Q96G30 205 aa6.49□□□□□ -1.37
RTN4IP1-204ENST00000539449 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
RTN4IP1-204ENST00000539449 TRAV4A0A0B4J268 109 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 LOC105371267A0A1B0GV96 52 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 IFITM10A6NMD0 228 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 SERF1AO75920 110 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 PPBPP02775 128 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 HOXA5P20719 270 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 IFI27P40305 119 aaPredicted RBP6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 FHL2Q14192 279 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 OR10J3Q5JRS4 329 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 NIT1Q86X76 327 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 DEFB104AQ8WTQ1 72 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 TM2D3Q9BRN9 247 aa6.48□□□□□ -1.37
RTN4IP1-204ENST00000539449 IGLV2-18A0A075B6J9 118 aa6.47□□□□□ -1.37
RTN4IP1-204ENST00000539449 TRGV2A0A075B6R0 118 aa6.47□□□□□ -1.37
RTN4IP1-204ENST00000539449 LYRM9A8MSI8 78 aa6.47□□□□□ -1.37
RTN4IP1-204ENST00000539449 PDZD11Q5EBL8 140 aa6.47□□□□□ -1.37
RTN4IP1-204ENST00000539449 NEGR1Q7Z3B1 354 aa6.47□□□□□ -1.37
RTN4IP1-204ENST00000539449 BAGE3Q86Y29 109 aa6.47□□□□□ -1.37
RTN4IP1-204ENST00000539449 HIST3H2BBQ8N257 126 aa6.47□□□□□ -1.37
RTN4IP1-204ENST00000539449 NDUFAF3Q9BU61 184 aa6.47□□□□□ -1.37
RTN4IP1-204ENST00000539449 A0A0J9YWU9 116 aa6.46□□□□□ -1.38
RTN4IP1-204ENST00000539449 LOC100131303A0A0U1RQF7 123 aa6.46□□□□□ -1.38
RTN4IP1-204ENST00000539449 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
RTN4IP1-204ENST00000539449 RHODO00212 210 aa6.46□□□□□ -1.38
RTN4IP1-204ENST00000539449 S100A6P06703 90 aa6.46□□□□□ -1.38
RTN4IP1-204ENST00000539449 C12orf74Q32Q52 190 aa6.46□□□□□ -1.38
RTN4IP1-204ENST00000539449 ZFP2Q6ZN57 461 aa6.46□□□□□ -1.38
RTN4IP1-204ENST00000539449 SPATA25Q9BR10 227 aa6.46□□□□□ -1.38
RTN4IP1-204ENST00000539449 SPART-AS1P0CW21 52 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 POLR2KP53803 58 aaKnown RBP6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 DAD1P61803 113 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 PMCHL1Q16048 86 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 RNASEKQ6P5S7 137 aaKnown RBP6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 FAM19A2Q8N3H0 131 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 Q8N8P6 123 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 NEXN-AS1Q8NBZ9 246 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 PRSS3P2Q8NHM4 247 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 C18orf15Q96N68 181 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 MAP1LC3AQ9H492 121 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 EDA2RQ9HAV5 297 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 NIT2Q9NQR4 276 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 LAMTOR2Q9Y2Q5 125 aa6.45□□□□□ -1.38
RTN4IP1-204ENST00000539449 DNAH10Q8IVF4 4471 aa6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 TRGV4A0A0C4DH28 118 aa6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 TRBV6-5A0A0K0K1A5 114 aa6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 TCAPO15273 167 aa6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 LINC00614P0C842 121 aa6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 ESDP10768 282 aa6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 SUMO2P61956 95 aaKnown RBP6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 SLC25A29Q8N8R3 303 aa6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 TMEM70Q9BUB7 260 aa6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 SMIM2Q9BVW6 85 aa6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 ST20Q9HBF5 79 aa6.44□□□□□ -1.38
RTN4IP1-204ENST00000539449 A0A096LNJ9 63 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 GAGE12JA6NER3 117 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 SDHAF1A6NFY7 115 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 LINC01546A6NGU7 62 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 K7EQD1 137 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 PMCHP20382 165 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 GAGE1Q13065 139 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 GAGE4Q13068 117 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 GAGE5Q13069 117 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 GAGE13Q4V321 117 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 LINC00173Q6ZV60 143 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 FA2HQ7L5A8 372 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 ZNRF2Q8NHG8 242 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 C20orf78Q9BR46 151 aa6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 C11orf68Q9H3H3 251 aaKnown RBP6.43□□□□□ -1.38
RTN4IP1-204ENST00000539449 IGHV3-38A0A0C4DH36 116 aa6.42□□□□□ -1.38
RTN4IP1-204ENST00000539449 H7C1H1 209 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms