RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 PHLDA1Q8WV24 401 aaPredicted RBP6.58□□□□□ -1.36
DDB1-213ENST00000539332 ODF3Q96PU9 254 aa6.58□□□□□ -1.36
DDB1-213ENST00000539332 GTSF1LQ9H1H1 148 aa6.58□□□□□ -1.36
DDB1-213ENST00000539332 A8MTW9 85 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 IGLC6P0CF74 106 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 SNRPD3P62318 126 aaKnown RBP6.57□□□□□ -1.36
DDB1-213ENST00000539332 SMAGPQ0VAQ4 97 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 PRR31Q5SQ13 230 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 PRR9Q5T870 116 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 AMN1Q8IY45 258 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 LINC00482Q8N8I6 264 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 MRAP2Q96G30 205 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 NAA38Q9BRA0 125 aaKnown RBP6.57□□□□□ -1.36
DDB1-213ENST00000539332 IGKV3-7A0A075B6H7 116 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 A0A0J9YX75 114 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 IGLL5B9A064 214 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 FXYD2P54710 66 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 DEFB1P60022 68 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 DEFB114Q30KQ6 69 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 GAGE13Q4V321 117 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 X6R8D5 127 aa6.57□□□□□ -1.36
DDB1-213ENST00000539332 TRBV25-1A0A075B6N4 114 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 KLLNB2CW77 178 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 F6UB75 175 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 ZNF688P0C7X2 276 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 PLNP26678 52 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 CKS1BP61024 79 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 LYRM7Q5U5X0 104 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 TMEM61Q8N0U2 210 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 DYNLRB2Q8TF09 96 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 CNFNQ9BYD5 112 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 NHP2Q9NX24 153 aaKnown RBP6.56□□□□□ -1.36
DDB1-213ENST00000539332 C11orf21Q9P2W6 132 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 DKK2Q9UBU2 259 aa6.56□□□□□ -1.36
DDB1-213ENST00000539332 NOTCH1P46531 2555 aa6.55□□□□□ -1.36
DDB1-213ENST00000539332 NBEAL1Q6ZS30 2694 aa6.55□□□□□ -1.36
DDB1-213ENST00000539332 A0A1B0GWB2 263 aa6.55□□□□□ -1.36
DDB1-213ENST00000539332 NPYP01303 97 aa6.55□□□□□ -1.36
DDB1-213ENST00000539332 PRSS1P07477 247 aa6.55□□□□□ -1.36
DDB1-213ENST00000539332 TNP2Q05952 138 aa6.55□□□□□ -1.36
DDB1-213ENST00000539332 RRN3P1Q2M238 152 aa6.55□□□□□ -1.36
DDB1-213ENST00000539332 MRPL16Q9NX20 251 aaKnown RBP6.55□□□□□ -1.36
DDB1-213ENST00000539332 HHLA3Q9XRX5 114 aa6.55□□□□□ -1.36
DDB1-213ENST00000539332 MGAM2Q2M2H8 2515 aa6.55□□□□□ -1.36
DDB1-213ENST00000539332 IGKV3D-20A0A0C4DH25 116 aa6.54□□□□□ -1.36
DDB1-213ENST00000539332 LEPP41159 167 aa6.54□□□□□ -1.36
DDB1-213ENST00000539332 Q8N8P6 123 aa6.54□□□□□ -1.36
DDB1-213ENST00000539332 SPATA3Q8NHX4 192 aa6.54□□□□□ -1.36
DDB1-213ENST00000539332 ZNF256Q9Y2P7 627 aaPredicted RBP6.54□□□□□ -1.36
DDB1-213ENST00000539332 ANK2Q01484 3957 aa6.54□□□□□ -1.36
DDB1-213ENST00000539332 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.54□□□□□ -1.36
DDB1-213ENST00000539332 DUSP14O95147 198 aaKnown RBP6.54□□□□□ -1.36
DDB1-213ENST00000539332 C12orf74Q32Q52 190 aa6.54□□□□□ -1.36
DDB1-213ENST00000539332 AMTNQ6UX39 209 aa6.54□□□□□ -1.36
DDB1-213ENST00000539332 MDFIQ99750 246 aa6.54□□□□□ -1.36
DDB1-213ENST00000539332 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
DDB1-213ENST00000539332 MUC4Q99102 2169 aa6.53□□□□□ -1.36
DDB1-213ENST00000539332 TRAV21A0A0B4J279 112 aa6.53□□□□□ -1.36
DDB1-213ENST00000539332 IGLV1-51P01701 117 aa6.53□□□□□ -1.36
DDB1-213ENST00000539332 ORM1P02763 201 aa6.53□□□□□ -1.36
DDB1-213ENST00000539332 WFDC2Q14508 124 aa6.53□□□□□ -1.36
DDB1-213ENST00000539332 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
DDB1-213ENST00000539332 Q6ZQT7 251 aa6.53□□□□□ -1.36
DDB1-213ENST00000539332 TMSB15BA0A087X1C1 80 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 IGKV2D-26A0A0A0MRZ7 120 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 TRAV12-1A0A0B4J245 112 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 H3BMG7 143 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 K7ERJ3 54 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 WFDC9Q8NEX5 89 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 HIST1H4GQ99525 98 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 C1QTNF4Q9BXJ3 329 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 MAP6D1Q9H9H5 199 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 A0A087WX48 190 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 K7EMI3 77 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
DDB1-213ENST00000539332 APOMO95445 188 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 MED14OSP0DP75 135 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 TCTAP57738 103 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 ETDBQ3ZM63 59 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 RNF185Q96GF1 192 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 C18orf15Q96N68 181 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 PRO0461Q9UI25 63 aa6.52□□□□□ -1.37
DDB1-213ENST00000539332 USP17L23D6RBM5 183 aa6.51□□□□□ -1.37
DDB1-213ENST00000539332 H3BMM0 161 aa6.51□□□□□ -1.37
DDB1-213ENST00000539332 J3QL48 77 aa6.51□□□□□ -1.37
DDB1-213ENST00000539332 INSL3P51460 131 aa6.51□□□□□ -1.37
DDB1-213ENST00000539332 DEFB131AP59861 70 aa6.51□□□□□ -1.37
DDB1-213ENST00000539332 GTSCR1Q86UQ5 136 aa6.51□□□□□ -1.37
DDB1-213ENST00000539332 OR11H12B2RN74 326 aa6.5□□□□□ -1.37
DDB1-213ENST00000539332 H7C1H1 209 aa6.5□□□□□ -1.37
DDB1-213ENST00000539332 RNASE4P34096 147 aaKnown RBP6.5□□□□□ -1.37
DDB1-213ENST00000539332 LAGE3Q14657 143 aa6.5□□□□□ -1.37
DDB1-213ENST00000539332 ODF3L2Q3SX64 289 aa6.5□□□□□ -1.37
DDB1-213ENST00000539332 C5orf47Q569G3 176 aa6.5□□□□□ -1.37
DDB1-213ENST00000539332 C9orf66Q5T8R8 295 aa6.5□□□□□ -1.37
DDB1-213ENST00000539332 FAM159AQ6UWV7 190 aa6.5□□□□□ -1.37
DDB1-213ENST00000539332 OR11H2Q8NH07 326 aa6.5□□□□□ -1.37
DDB1-213ENST00000539332 TRBV7-3A0A075B6L6 115 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 MYMXA0A1B0GTQ4 84 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms