RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 DAZ3Q9NR90 486 aaKnown RBP7.71□□□□□ -1.18
RTN3-209ENST00000538995 KIF25-AS1Q9Y6Z4 181 aa7.71□□□□□ -1.18
RTN3-209ENST00000538995 A0A087WX48 190 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 TRBV6-8A0A0A6YYG3 113 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 MUC21A0A0G2JKD1 596 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 MUC21A0A140T8X8 626 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 RBFOX3A6NFN3 312 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 F5H697 171 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 TMEM250H0YL14 139 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 PKIAP61925 76 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 TMEM97Q5BJF2 176 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 ALKAL2Q6UX46 152 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 Q8N814 137 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 LYPD6BQ8NI32 183 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 TPPP3Q9BW30 176 aa7.7□□□□□ -1.18
RTN3-209ENST00000538995 IGLV5-52A0A0A0MRZ9 124 aa7.69□□□□□ -1.18
RTN3-209ENST00000538995 H7C1H1 209 aa7.69□□□□□ -1.18
RTN3-209ENST00000538995 GZMBP10144 247 aa7.69□□□□□ -1.18
RTN3-209ENST00000538995 GCSHP23434 173 aa7.69□□□□□ -1.18
RTN3-209ENST00000538995 FUSP35637 526 aaKnown RBP eCLIP7.69□□□□□ -1.18
RTN3-209ENST00000538995 CTRLP40313 264 aa7.69□□□□□ -1.18
RTN3-209ENST00000538995 WDR73Q6P4I2 378 aa7.69□□□□□ -1.18
RTN3-209ENST00000538995 KRTAP4-5Q9BYR2 181 aa7.69□□□□□ -1.18
RTN3-209ENST00000538995 NDUFS6O75380 124 aaKnown RBP7.68□□□□□ -1.18
RTN3-209ENST00000538995 TRGC1P0CF51 173 aa7.68□□□□□ -1.18
RTN3-209ENST00000538995 KRTAP10-1P60331 282 aa7.68□□□□□ -1.18
RTN3-209ENST00000538995 ATRAIDQ6UW56 229 aa7.68□□□□□ -1.18
RTN3-209ENST00000538995 DNAJC30Q96LL9 226 aa7.68□□□□□ -1.18
RTN3-209ENST00000538995 CNFNQ9BYD5 112 aa7.68□□□□□ -1.18
RTN3-209ENST00000538995 M0QY20 66 aa7.67□□□□□ -1.18
RTN3-209ENST00000538995 SSTP61278 116 aa7.67□□□□□ -1.18
RTN3-209ENST00000538995 Q0VG73 95 aa7.67□□□□□ -1.18
RTN3-209ENST00000538995 LYZL1Q6UWQ5 148 aa7.67□□□□□ -1.18
RTN3-209ENST00000538995 NUDT10Q8NFP7 164 aa7.67□□□□□ -1.18
RTN3-209ENST00000538995 NUDT11Q96G61 164 aa7.67□□□□□ -1.18
RTN3-209ENST00000538995 TMEM70Q9BUB7 260 aa7.67□□□□□ -1.18
RTN3-209ENST00000538995 RPP21Q9H633 154 aaKnown RBP7.67□□□□□ -1.18
RTN3-209ENST00000538995 KLK12Q9UKR0 248 aa7.67□□□□□ -1.18
RTN3-209ENST00000538995 K7EN84 100 aa7.66□□□□□ -1.18
RTN3-209ENST00000538995 MGPP08493 103 aa7.66□□□□□ -1.18
RTN3-209ENST00000538995 XGP55808 180 aa7.66□□□□□ -1.18
RTN3-209ENST00000538995 UBE2WQ96B02 151 aa7.66□□□□□ -1.18
RTN3-209ENST00000538995 DPH3P1Q9H4G8 78 aa7.66□□□□□ -1.18
RTN3-209ENST00000538995 TRBV25-1A0A075B6N4 114 aa7.65□□□□□ -1.18
RTN3-209ENST00000538995 IGKV2D-24A0A075B6R9 120 aa7.65□□□□□ -1.18
RTN3-209ENST00000538995 TMEM262E9PQX1 116 aa7.65□□□□□ -1.18
RTN3-209ENST00000538995 NTF3P20783 257 aa7.65□□□□□ -1.18
RTN3-209ENST00000538995 WFDC2Q14508 124 aa7.65□□□□□ -1.18
RTN3-209ENST00000538995 IQCJQ1A5X6 159 aa7.65□□□□□ -1.18
RTN3-209ENST00000538995 SUMO4Q6EEV6 95 aa7.65□□□□□ -1.18
RTN3-209ENST00000538995 FAM231DQ6ZW35 169 aa7.65□□□□□ -1.18
RTN3-209ENST00000538995 OCC1Q8TAD7 63 aa7.65□□□□□ -1.18
RTN3-209ENST00000538995 CHCHD5Q9BSY4 110 aa7.65□□□□□ -1.18
RTN3-209ENST00000538995 RNASE7Q9H1E1 156 aaKnown RBP7.65□□□□□ -1.18
RTN3-209ENST00000538995 CRPP02741 224 aa7.64□□□□□ -1.19
RTN3-209ENST00000538995 MPV17L2Q567V2 206 aa7.64□□□□□ -1.19
RTN3-209ENST00000538995 CT83Q5H943 113 aa7.64□□□□□ -1.19
RTN3-209ENST00000538995 RASL11AQ6T310 242 aa7.64□□□□□ -1.19
RTN3-209ENST00000538995 NTM-AS1Q6ZSK4 140 aa7.64□□□□□ -1.19
RTN3-209ENST00000538995 Q8N976 141 aa7.64□□□□□ -1.19
RTN3-209ENST00000538995 FRZBQ92765 325 aa7.64□□□□□ -1.19
RTN3-209ENST00000538995 FAT1Q14517 4588 aa7.64□□□□□ -1.19
RTN3-209ENST00000538995 DNAH8Q96JB1 4490 aa7.63□□□□□ -1.19
RTN3-209ENST00000538995 IGHV1-24A0A0C4DH33 117 aa7.63□□□□□ -1.19
RTN3-209ENST00000538995 NKX2-5P52952 324 aaPredicted RBP7.63□□□□□ -1.19
RTN3-209ENST00000538995 C15orf54Q8N8G6 183 aa7.63□□□□□ -1.19
RTN3-209ENST00000538995 PGLYRP4Q96LB8 373 aa7.63□□□□□ -1.19
RTN3-209ENST00000538995 C1orf43Q9BWL3 253 aa7.63□□□□□ -1.19
RTN3-209ENST00000538995 NIT2Q9NQR4 276 aa7.63□□□□□ -1.19
RTN3-209ENST00000538995 A8MWL6 223 aa7.62□□□□□ -1.19
RTN3-209ENST00000538995 EPM2AB3EWF7 344 aa7.62□□□□□ -1.19
RTN3-209ENST00000538995 LECT2O14960 151 aa7.62□□□□□ -1.19
RTN3-209ENST00000538995 ANGP03950 147 aaKnown RBP7.62□□□□□ -1.19
RTN3-209ENST00000538995 TWIST1Q15672 202 aa7.62□□□□□ -1.19
RTN3-209ENST00000538995 MIAQ16674 131 aa7.62□□□□□ -1.19
RTN3-209ENST00000538995 ENHOQ6UWT2 76 aa7.62□□□□□ -1.19
RTN3-209ENST00000538995 GTSF1Q8WW33 167 aa7.62□□□□□ -1.19
RTN3-209ENST00000538995 BAALCQ8WXS3 180 aa7.62□□□□□ -1.19
RTN3-209ENST00000538995 EIF5A2Q9GZV4 153 aaKnown RBP7.62□□□□□ -1.19
RTN3-209ENST00000538995 PRR34Q9NV39 138 aa7.62□□□□□ -1.19
RTN3-209ENST00000538995 VPS13BQ7Z7G8 4022 aa7.61□□□□□ -1.19
RTN3-209ENST00000538995 A0A1B0GVG6 124 aa7.61□□□□□ -1.19
RTN3-209ENST00000538995 GATCO43716 136 aaKnown RBP7.61□□□□□ -1.19
RTN3-209ENST00000538995 RBX1P62877 108 aa7.61□□□□□ -1.19
RTN3-209ENST00000538995 C14orf177Q52M58 125 aa7.61□□□□□ -1.19
RTN3-209ENST00000538995 SMIM15Q7Z3B0 74 aa7.61□□□□□ -1.19
RTN3-209ENST00000538995 SMIM7Q9BQ49 75 aa7.61□□□□□ -1.19
RTN3-209ENST00000538995 LOC100996750A0A140TA64 210 aa7.6□□□□□ -1.19
RTN3-209ENST00000538995 CEBPGP53567 150 aa7.6□□□□□ -1.19
RTN3-209ENST00000538995 FOXA3P55318 350 aaPredicted RBP7.6□□□□□ -1.19
RTN3-209ENST00000538995 GAGE6Q13070 117 aa7.6□□□□□ -1.19
RTN3-209ENST00000538995 TEX261Q6UWH6 196 aa7.6□□□□□ -1.19
RTN3-209ENST00000538995 Q6ZSA8 131 aa7.6□□□□□ -1.19
RTN3-209ENST00000538995 LINC01551Q86U37 167 aa7.6□□□□□ -1.19
RTN3-209ENST00000538995 TMEM243Q9BU79 118 aa7.6□□□□□ -1.19
RTN3-209ENST00000538995 KRTAP4-6Q9BYQ5 205 aa7.6□□□□□ -1.19
RTN3-209ENST00000538995 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.59□□□□□ -1.19
RTN3-209ENST00000538995 A0A1B0GUV1 79 aa7.59□□□□□ -1.19
RTN3-209ENST00000538995 FAM231BA6NCW3 169 aa7.59□□□□□ -1.19
RTN3-209ENST00000538995 COTL1Q14019 142 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms