RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 K7EP34 96 aa18.31■□□□□ 0.52
RAB40C-204ENST00000538492 WFDC11Q8NEX6 87 aa18.31■□□□□ 0.52
RAB40C-204ENST00000538492 IGHV3-73A0A0B4J1V6 119 aa18.3■□□□□ 0.52
RAB40C-204ENST00000538492 PMVKQ15126 192 aa18.3■□□□□ 0.52
RAB40C-204ENST00000538492 SAMD5Q5TGI4 173 aa18.3■□□□□ 0.52
RAB40C-204ENST00000538492 TRPT1Q86TN4 253 aaKnown RBP18.3■□□□□ 0.52
RAB40C-204ENST00000538492 FLNAP21333 2647 aaKnown RBP18.29■□□□□ 0.52
RAB40C-204ENST00000538492 RIPPLY3P57055 190 aa18.29■□□□□ 0.52
RAB40C-204ENST00000538492 TENM4Q6N022 2769 aa18.29■□□□□ 0.52
RAB40C-204ENST00000538492 RBX1P62877 108 aa18.29■□□□□ 0.52
RAB40C-204ENST00000538492 DYNLRB2Q8TF09 96 aa18.29■□□□□ 0.52
RAB40C-204ENST00000538492 SPCS1Q9Y6A9 102 aa18.29■□□□□ 0.52
RAB40C-204ENST00000538492 PHLDA1Q8WV24 401 aaPredicted RBP18.28■□□□□ 0.52
RAB40C-204ENST00000538492 TMEM141Q96I45 108 aa18.28■□□□□ 0.52
RAB40C-204ENST00000538492 TIMM17AQ99595 171 aa18.28■□□□□ 0.52
RAB40C-204ENST00000538492 WNK1Q9H4A3 2382 aa18.28■□□□□ 0.52
RAB40C-204ENST00000538492 HIST2H2BCQ6DN03 193 aa18.28■□□□□ 0.52
RAB40C-204ENST00000538492 C11orf44Q8N8P7 122 aa18.28■□□□□ 0.52
RAB40C-204ENST00000538492 LINC01549A6NIU2 74 aa18.27■□□□□ 0.52
RAB40C-204ENST00000538492 OPRPNQ99935 248 aaPredicted RBP18.27■□□□□ 0.52
RAB40C-204ENST00000538492 TAL2Q16559 108 aa18.27■□□□□ 0.51
RAB40C-204ENST00000538492 ZNF815PA8K554 130 aa18.26■□□□□ 0.51
RAB40C-204ENST00000538492 FABP2P12104 132 aa18.26■□□□□ 0.51
RAB40C-204ENST00000538492 SCGB2A2Q13296 93 aa18.26■□□□□ 0.51
RAB40C-204ENST00000538492 Q6ZSV7 163 aa18.26■□□□□ 0.51
RAB40C-204ENST00000538492 PROK1P58294 105 aa18.26■□□□□ 0.51
RAB40C-204ENST00000538492 MAP6D1Q9H9H5 199 aa18.26■□□□□ 0.51
RAB40C-204ENST00000538492 TRBV7-3A0A075B6L6 115 aa18.25■□□□□ 0.51
RAB40C-204ENST00000538492 CBY1Q9Y3M2 126 aa18.25■□□□□ 0.51
RAB40C-204ENST00000538492 P0DMU3 169 aa18.25■□□□□ 0.51
RAB40C-204ENST00000538492 FAM231AP0DMU4 169 aa18.25■□□□□ 0.51
RAB40C-204ENST00000538492 FAM231CP0DMU5 169 aa18.25■□□□□ 0.51
RAB40C-204ENST00000538492 RNF151Q2KHN1 245 aa18.25■□□□□ 0.51
RAB40C-204ENST00000538492 OCIAD2Q56VL3 154 aa18.25■□□□□ 0.51
RAB40C-204ENST00000538492 DEFB114Q30KQ6 69 aa18.23■□□□□ 0.51
RAB40C-204ENST00000538492 NSUN5P1Q3KNT7 163 aa18.23■□□□□ 0.51
RAB40C-204ENST00000538492 ZNRF2Q8NHG8 242 aa18.23■□□□□ 0.51
RAB40C-204ENST00000538492 PLEKHB2Q96CS7 222 aa18.23■□□□□ 0.51
RAB40C-204ENST00000538492 DNAJC9-AS1A6NH13 148 aa18.23■□□□□ 0.51
RAB40C-204ENST00000538492 A8MTW9 85 aa18.23■□□□□ 0.51
RAB40C-204ENST00000538492 I3L3M4 83 aa18.23■□□□□ 0.51
RAB40C-204ENST00000538492 TMEM170BQ5T4T1 132 aa18.23■□□□□ 0.51
RAB40C-204ENST00000538492 SCGB1D4Q6XE38 83 aa18.23■□□□□ 0.51
RAB40C-204ENST00000538492 A0A1W2PRX2 142 aa18.22■□□□□ 0.51
RAB40C-204ENST00000538492 C12orf74Q32Q52 190 aa18.22■□□□□ 0.51
RAB40C-204ENST00000538492 RHOHQ15669 191 aa18.22■□□□□ 0.51
RAB40C-204ENST00000538492 PAPPA-AS1Q5QFB9 102 aa18.22■□□□□ 0.51
RAB40C-204ENST00000538492 SETD2Q9BYW2 2564 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-204ENST00000538492 TRAV2A0A0B4J234 112 aa18.21■□□□□ 0.51
RAB40C-204ENST00000538492 NACAE9PAV3 2078 aa18.2■□□□□ 0.5
RAB40C-204ENST00000538492 C20orf203Q8NBC4 194 aa18.2■□□□□ 0.5
RAB40C-204ENST00000538492 HERVK_113P61574 105 aa18.19■□□□□ 0.5
RAB40C-204ENST00000538492 RAX2Q96IS3 184 aa18.19■□□□□ 0.5
RAB40C-204ENST00000538492 LINC01587Q99440 93 aa18.19■□□□□ 0.5
RAB40C-204ENST00000538492 TMEM86BQ8N661 226 aa18.18■□□□□ 0.5
RAB40C-204ENST00000538492 Q9UF83 564 aa18.18■□□□□ 0.5
RAB40C-204ENST00000538492 IGLL5B9A064 214 aa18.18■□□□□ 0.5
RAB40C-204ENST00000538492 M0R2P5 195 aa18.18■□□□□ 0.5
RAB40C-204ENST00000538492 OR5A1Q8NGJ0 315 aa18.18■□□□□ 0.5
RAB40C-204ENST00000538492 SPAG8Q99932 426 aaPredicted RBP18.18■□□□□ 0.5
RAB40C-204ENST00000538492 ESM1Q9NQ30 184 aa18.18■□□□□ 0.5
RAB40C-204ENST00000538492 TSPEAR-AS2P59090 65 aa18.17■□□□□ 0.5
RAB40C-204ENST00000538492 ACANP16112 2415 aa18.16■□□□□ 0.5
RAB40C-204ENST00000538492 ZNF415Q09FC8 603 aa18.16■□□□□ 0.5
RAB40C-204ENST00000538492 NIPBLQ6KC79 2804 aaeCLIP18.15■□□□□ 0.5
RAB40C-204ENST00000538492 SRSF9Q13242 221 aaKnown RBP eCLIP18.15■□□□□ 0.5
RAB40C-204ENST00000538492 Q6ZSN1 163 aa18.15■□□□□ 0.5
RAB40C-204ENST00000538492 SAP30O75446 220 aa18.15■□□□□ 0.5
RAB40C-204ENST00000538492 ZNF479Q96JC4 524 aa18.15■□□□□ 0.5
RAB40C-204ENST00000538492 A8MWV9 139 aa18.14■□□□□ 0.49
RAB40C-204ENST00000538492 CD28P10747 220 aa18.13■□□□□ 0.49
RAB40C-204ENST00000538492 XCL2Q9UBD3 114 aa18.13■□□□□ 0.49
RAB40C-204ENST00000538492 TNFRSF18Q9Y5U5 241 aa18.13■□□□□ 0.49
RAB40C-204ENST00000538492 ODF3L2Q3SX64 289 aa18.13■□□□□ 0.49
RAB40C-204ENST00000538492 MRPL16Q9NX20 251 aaKnown RBP18.13■□□□□ 0.49
RAB40C-204ENST00000538492 IGLV4-3A0A075B6K6 122 aa18.12■□□□□ 0.49
RAB40C-204ENST00000538492 C11orf72Q8NBR9 251 aa18.12■□□□□ 0.49
RAB40C-204ENST00000538492 INSP01308 110 aa18.12■□□□□ 0.49
RAB40C-204ENST00000538492 CFAP126Q5VTH2 177 aa18.12■□□□□ 0.49
RAB40C-204ENST00000538492 PDZD2O15018 2839 aa18.11■□□□□ 0.49
RAB40C-204ENST00000538492 NFE4Q86UQ8 179 aa18.11■□□□□ 0.49
RAB40C-204ENST00000538492 VCX2Q9H322 139 aa18.11■□□□□ 0.49
RAB40C-204ENST00000538492 CEMP1Q6PRD7 247 aaPredicted RBP18.1■□□□□ 0.49
RAB40C-204ENST00000538492 EDA2RQ9HAV5 297 aa18.1■□□□□ 0.49
RAB40C-204ENST00000538492 IGHV3-64A0A075B6Q5 118 aa18.1■□□□□ 0.49
RAB40C-204ENST00000538492 IGHV3OR16-12A0A075B7B8 117 aa18.1■□□□□ 0.49
RAB40C-204ENST00000538492 A0A0J9YY99 117 aa18.1■□□□□ 0.49
RAB40C-204ENST00000538492 A0A1B0GWB2 263 aa18.1■□□□□ 0.49
RAB40C-204ENST00000538492 K7ERU9 68 aa18.1■□□□□ 0.49
RAB40C-204ENST00000538492 CCL24O00175 119 aa18.1■□□□□ 0.49
RAB40C-204ENST00000538492 A0A0J9YXV3 536 aa18.09■□□□□ 0.49
RAB40C-204ENST00000538492 VPS25Q9BRG1 176 aa18.09■□□□□ 0.49
RAB40C-204ENST00000538492 MTORP42345 2549 aa18.09■□□□□ 0.49
RAB40C-204ENST00000538492 J3QQQ9 107 aa18.09■□□□□ 0.49
RAB40C-204ENST00000538492 TEX29Q8N6K0 151 aa18.09■□□□□ 0.49
RAB40C-204ENST00000538492 ITPR2Q14571 2701 aa18.09■□□□□ 0.49
RAB40C-204ENST00000538492 RRN3P1Q2M238 152 aa18.08■□□□□ 0.49
RAB40C-204ENST00000538492 AZU1P20160 251 aa18.08■□□□□ 0.48
RAB40C-204ENST00000538492 CITED2Q99967 270 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-204ENST00000538492 STHQ8IWL8 128 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms