RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 POLR2KP53803 58 aaKnown RBP11.43□□□□□ -0.58
CDH20-203ENST00000538374 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
CDH20-203ENST00000538374 PDZD2O15018 2839 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 CCDC168Q8NDH2 2452 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 Q9UF83 564 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 TMEM238C9JI98 176 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 P0DMU3 169 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 FAM231AP0DMU4 169 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 FAM231CP0DMU5 169 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 PROK1P58294 105 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 SMAGPQ0VAQ4 97 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 HIST2H2BCQ6DN03 193 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 APRG1Q8IVJ8 170 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 PTH2Q96A98 100 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 JMJD1CQ15652 2540 aa11.42□□□□□ -0.58
CDH20-203ENST00000538374 Q6YL49 198 aa11.41□□□□□ -0.58
CDH20-203ENST00000538374 GAGE13Q4V321 117 aa11.41□□□□□ -0.58
CDH20-203ENST00000538374 TAL2Q16559 108 aa11.4□□□□□ -0.58
CDH20-203ENST00000538374 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.59
CDH20-203ENST00000538374 C18orf65Q6ZTR6 163 aa11.4□□□□□ -0.59
CDH20-203ENST00000538374 ZNF418Q8TF45 676 aaPredicted RBP11.4□□□□□ -0.59
CDH20-203ENST00000538374 A0A1B0GWB2 263 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 PSMB2P49721 201 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 DEFB136Q30KP8 78 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 DUX3Q96PT4 197 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 KIR2DL4Q99706 377 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 PRO0461Q9UI25 63 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 VPREB3Q9UKI3 123 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 ITPR3Q14573 2671 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 IGHV3-16A0A0C4DH30 117 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 KNCNA6PVL3 124 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 AZU1P20160 251 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 PSMB8P28062 276 aa11.39□□□□□ -0.59
CDH20-203ENST00000538374 CEMP1Q6PRD7 247 aaPredicted RBP11.39□□□□□ -0.59
CDH20-203ENST00000538374 J3QKU1 62 aa11.38□□□□□ -0.59
CDH20-203ENST00000538374 PMVKQ15126 192 aa11.38□□□□□ -0.59
CDH20-203ENST00000538374 IGHV4OR15-8A0A075B7B6 117 aa11.38□□□□□ -0.59
CDH20-203ENST00000538374 A0A087WW49 117 aa11.38□□□□□ -0.59
CDH20-203ENST00000538374 A0A0J9YY99 117 aa11.38□□□□□ -0.59
CDH20-203ENST00000538374 ADARB2-AS1A8MUL3 147 aa11.38□□□□□ -0.59
CDH20-203ENST00000538374 VCYO14598 125 aa11.38□□□□□ -0.59
CDH20-203ENST00000538374 TSPAN13O95857 204 aa11.38□□□□□ -0.59
CDH20-203ENST00000538374 ID1P41134 155 aa11.38□□□□□ -0.59
CDH20-203ENST00000538374 SMCPP49901 116 aaPredicted RBP11.38□□□□□ -0.59
CDH20-203ENST00000538374 F8W1H4 67 aa11.37□□□□□ -0.59
CDH20-203ENST00000538374 NXPH4O95158 308 aa11.37□□□□□ -0.59
CDH20-203ENST00000538374 RBMY1A1P0DJD3 496 aaKnown RBP11.37□□□□□ -0.59
CDH20-203ENST00000538374 RBMY1CP0DJD4 496 aa11.37□□□□□ -0.59
CDH20-203ENST00000538374 MED14OSP0DP75 135 aa11.37□□□□□ -0.59
CDH20-203ENST00000538374 RBMY1FQ15415 496 aaKnown RBP11.37□□□□□ -0.59
CDH20-203ENST00000538374 ZNF876PQ49A33 203 aa11.37□□□□□ -0.59
CDH20-203ENST00000538374 A0A0J9YX75 114 aa11.36□□□□□ -0.59
CDH20-203ENST00000538374 H7C2G1 150 aa11.36□□□□□ -0.59
CDH20-203ENST00000538374 M0QY20 66 aa11.36□□□□□ -0.59
CDH20-203ENST00000538374 ZNF702PQ9H963 129 aa11.36□□□□□ -0.59
CDH20-203ENST00000538374 WFDC11Q8NEX6 87 aa11.36□□□□□ -0.59
CDH20-203ENST00000538374 TMEM89A2RUT3 159 aa11.35□□□□□ -0.59
CDH20-203ENST00000538374 GAGE12HA6NDE8 117 aa11.35□□□□□ -0.59
CDH20-203ENST00000538374 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
CDH20-203ENST00000538374 A0A0J9YXV3 536 aa11.34□□□□□ -0.59
CDH20-203ENST00000538374 RAX2Q96IS3 184 aa11.34□□□□□ -0.59
CDH20-203ENST00000538374 CFC1BP0CG36 223 aa11.34□□□□□ -0.59
CDH20-203ENST00000538374 CFC1P0CG37 223 aa11.34□□□□□ -0.59
CDH20-203ENST00000538374 SAMD13Q5VXD3 122 aa11.34□□□□□ -0.59
CDH20-203ENST00000538374 NFE4Q86UQ8 179 aa11.34□□□□□ -0.59
CDH20-203ENST00000538374 IGHV1OR15-1A0A075B7D0 117 aa11.33□□□□□ -0.59
CDH20-203ENST00000538374 UBE2D1P51668 147 aa11.33□□□□□ -0.59
CDH20-203ENST00000538374 C9orf85Q96MD7 179 aa11.33□□□□□ -0.59
CDH20-203ENST00000538374 TRBV27A0A0K0K1C4 114 aa11.33□□□□□ -0.6
CDH20-203ENST00000538374 A8MZ25 164 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 J3QQQ9 107 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 K7EQG2 157 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 LGALS9O00182 355 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 EIF4EBP3O60516 100 aaPredicted RBP11.32□□□□□ -0.6
CDH20-203ENST00000538374 PPP1R17O96001 155 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 SNRPD3P62318 126 aaKnown RBP11.32□□□□□ -0.6
CDH20-203ENST00000538374 NDUFA11Q86Y39 141 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 AMELXQ99217 191 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 K7EMT4 169 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 IGHV3-30P01768 117 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 IGHV3-30-5P0DP03 117 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 HELZ2Q9BYK8 2649 aaKnown RBP11.32□□□□□ -0.6
CDH20-203ENST00000538374 SLURP1P55000 103 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 KRTAP1-1Q07627 177 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 Q8N2B8 174 aa11.32□□□□□ -0.6
CDH20-203ENST00000538374 TRAV2A0A0B4J234 112 aa11.31□□□□□ -0.6
CDH20-203ENST00000538374 TCL1BO95988 128 aa11.31□□□□□ -0.6
CDH20-203ENST00000538374 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
CDH20-203ENST00000538374 HERVK_113P61574 105 aa11.31□□□□□ -0.6
CDH20-203ENST00000538374 SIGMAR1Q99720 223 aa11.31□□□□□ -0.6
CDH20-203ENST00000538374 SPXQ9BT56 116 aa11.31□□□□□ -0.6
CDH20-203ENST00000538374 RNF152Q8N8N0 203 aa11.31□□□□□ -0.6
CDH20-203ENST00000538374 TRBV7-9A0A0J9YWB2 115 aa11.3□□□□□ -0.6
CDH20-203ENST00000538374 Q6ZSN1 163 aa11.3□□□□□ -0.6
CDH20-203ENST00000538374 ANK3Q12955 4377 aaKnown RBP11.3□□□□□ -0.6
CDH20-203ENST00000538374 ACANP16112 2415 aa11.3□□□□□ -0.6
CDH20-203ENST00000538374 TRAV8-3A0A0A6YYJ7 113 aa11.3□□□□□ -0.6
CDH20-203ENST00000538374 LINC01619G3V211 115 aa11.3□□□□□ -0.6
CDH20-203ENST00000538374 LGALS3P17931 250 aaKnown RBP11.3□□□□□ -0.6
CDH20-203ENST00000538374 NPC2P61916 151 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms