RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 TAX1BP3O14907 124 aa12.76□□□□□ -0.37
SNX17-210ENST00000537606 GAGE1Q13065 139 aa12.76□□□□□ -0.37
SNX17-210ENST00000537606 JMJD8Q96S16 334 aa12.76□□□□□ -0.37
SNX17-210ENST00000537606 WFDC10AQ9H1F0 79 aa12.76□□□□□ -0.37
SNX17-210ENST00000537606 TMEM97Q5BJF2 176 aa12.75□□□□□ -0.37
SNX17-210ENST00000537606 PPP1R17O96001 155 aa12.74□□□□□ -0.37
SNX17-210ENST00000537606 ORAOV1Q8WV07 137 aa12.74□□□□□ -0.37
SNX17-210ENST00000537606 POLR2KP53803 58 aaKnown RBP12.73□□□□□ -0.37
SNX17-210ENST00000537606 MORN3Q6PF18 240 aaPredicted RBP12.73□□□□□ -0.37
SNX17-210ENST00000537606 FLNBO75369 2602 aaKnown RBP12.73□□□□□ -0.37
SNX17-210ENST00000537606 SDHAF1A6NFY7 115 aa12.73□□□□□ -0.37
SNX17-210ENST00000537606 M0QY20 66 aa12.73□□□□□ -0.37
SNX17-210ENST00000537606 INSP01308 110 aa12.73□□□□□ -0.37
SNX17-210ENST00000537606 VWFP04275 2813 aa12.73□□□□□ -0.37
SNX17-210ENST00000537606 RPL39P62891 51 aaKnown RBP12.72□□□□□ -0.37
SNX17-210ENST00000537606 C21orf62-AS1Q17RA5 79 aa12.72□□□□□ -0.37
SNX17-210ENST00000537606 AZU1P20160 251 aa12.72□□□□□ -0.37
SNX17-210ENST00000537606 NEXN-AS1Q8NBZ9 246 aa12.72□□□□□ -0.37
SNX17-210ENST00000537606 BAALCQ8WXS3 180 aa12.72□□□□□ -0.37
SNX17-210ENST00000537606 TP53TG1Q9Y2A0 90 aa12.71□□□□□ -0.37
SNX17-210ENST00000537606 TENM1Q9UKZ4 2725 aa12.71□□□□□ -0.37
SNX17-210ENST00000537606 CCL25O15444 150 aa12.71□□□□□ -0.38
SNX17-210ENST00000537606 ZFP2Q6ZN57 461 aa12.71□□□□□ -0.38
SNX17-210ENST00000537606 TRPT1Q86TN4 253 aaKnown RBP12.71□□□□□ -0.38
SNX17-210ENST00000537606 CHTOPQ9Y3Y2 248 aaKnown RBP12.71□□□□□ -0.38
SNX17-210ENST00000537606 TRAV8-6A0A0B4J262 113 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 F8VRH5 84 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 H7C1H1 209 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 IGLV1-51P01701 117 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 P0DMU3 169 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 FAM231AP0DMU4 169 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 FAM231CP0DMU5 169 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 PRSS29PA6NIE9 313 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 K7EMI3 77 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 VCYO14598 125 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 C1orf158Q8N1D5 194 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 MAPKAPK5-AS1Q8N8E1 139 aa12.7□□□□□ -0.38
SNX17-210ENST00000537606 TRAV12-1A0A0B4J245 112 aa12.69□□□□□ -0.38
SNX17-210ENST00000537606 M0R2P5 195 aa12.69□□□□□ -0.38
SNX17-210ENST00000537606 TSHBP01222 138 aa12.69□□□□□ -0.38
SNX17-210ENST00000537606 ZNF415Q09FC8 603 aa12.69□□□□□ -0.38
SNX17-210ENST00000537606 C11orf72Q8NBR9 251 aa12.69□□□□□ -0.38
SNX17-210ENST00000537606 SVIPQ8NHG7 77 aa12.69□□□□□ -0.38
SNX17-210ENST00000537606 MRPL16Q9NX20 251 aaKnown RBP12.69□□□□□ -0.38
SNX17-210ENST00000537606 K7EP13 123 aa12.69□□□□□ -0.38
SNX17-210ENST00000537606 EMP1P54849 157 aa12.69□□□□□ -0.38
SNX17-210ENST00000537606 KIR2DL4Q99706 377 aa12.69□□□□□ -0.38
SNX17-210ENST00000537606 Q9UF83 564 aa12.69□□□□□ -0.38
SNX17-210ENST00000537606 PTTG1IPP53801 180 aa12.68□□□□□ -0.38
SNX17-210ENST00000537606 VAMP3Q15836 100 aa12.68□□□□□ -0.38
SNX17-210ENST00000537606 CYSLTR1Q9Y271 337 aa12.68□□□□□ -0.38
SNX17-210ENST00000537606 SIVA1O15304 175 aa12.68□□□□□ -0.38
SNX17-210ENST00000537606 PF4P02776 101 aa12.68□□□□□ -0.38
SNX17-210ENST00000537606 RPL35AP18077 110 aaKnown RBP12.68□□□□□ -0.38
SNX17-210ENST00000537606 PLNP26678 52 aa12.68□□□□□ -0.38
SNX17-210ENST00000537606 HSD52Q0P140 79 aa12.68□□□□□ -0.38
SNX17-210ENST00000537606 Q6ZSN1 163 aa12.67□□□□□ -0.38
SNX17-210ENST00000537606 NACAE9PAV3 2078 aa12.67□□□□□ -0.38
SNX17-210ENST00000537606 TRBV25-1A0A075B6N4 114 aa12.67□□□□□ -0.38
SNX17-210ENST00000537606 TRBV6-5A0A0K0K1A5 114 aa12.67□□□□□ -0.38
SNX17-210ENST00000537606 RPL32P62910 135 aaKnown RBP12.67□□□□□ -0.38
SNX17-210ENST00000537606 TRBV27A0A0K0K1C4 114 aa12.66□□□□□ -0.38
SNX17-210ENST00000537606 NDUFA11Q86Y39 141 aa12.66□□□□□ -0.38
SNX17-210ENST00000537606 CLUHP3Q96NS8 147 aa12.66□□□□□ -0.38
SNX17-210ENST00000537606 NAA38Q9BRA0 125 aaKnown RBP12.66□□□□□ -0.38
SNX17-210ENST00000537606 UBE2V1Q13404 147 aa12.66□□□□□ -0.38
SNX17-210ENST00000537606 SPATA3Q8NHX4 192 aa12.66□□□□□ -0.38
SNX17-210ENST00000537606 C19orf73Q9NVV2 129 aa12.66□□□□□ -0.38
SNX17-210ENST00000537606 ATRQ13535 2644 aa12.65□□□□□ -0.38
SNX17-210ENST00000537606 IGIPA6NJ69 53 aa12.65□□□□□ -0.38
SNX17-210ENST00000537606 SEC11AP67812 179 aa12.65□□□□□ -0.38
SNX17-210ENST00000537606 CHAC1Q9BUX1 264 aa12.65□□□□□ -0.38
SNX17-210ENST00000537606 CFAP126Q5VTH2 177 aa12.64□□□□□ -0.39
SNX17-210ENST00000537606 OPRPNQ99935 248 aaPredicted RBP12.64□□□□□ -0.39
SNX17-210ENST00000537606 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
SNX17-210ENST00000537606 BEAN1Q3B7T3 259 aa12.64□□□□□ -0.39
SNX17-210ENST00000537606 AMMECR1LQ6DCA0 310 aa12.64□□□□□ -0.39
SNX17-210ENST00000537606 A8MWV9 139 aa12.63□□□□□ -0.39
SNX17-210ENST00000537606 GCSHP23434 173 aa12.63□□□□□ -0.39
SNX17-210ENST00000537606 UFSP1Q6NVU6 142 aa12.63□□□□□ -0.39
SNX17-210ENST00000537606 FXYD2P54710 66 aa12.63□□□□□ -0.39
SNX17-210ENST00000537606 RAB37Q96AX2 223 aa12.63□□□□□ -0.39
SNX17-210ENST00000537606 LINC00467Q9BRT7 94 aa12.63□□□□□ -0.39
SNX17-210ENST00000537606 LINC00482Q8N8I6 264 aa12.62□□□□□ -0.39
SNX17-210ENST00000537606 RIPPLY3P57055 190 aa12.61□□□□□ -0.39
SNX17-210ENST00000537606 F8P00451 2351 aa12.61□□□□□ -0.39
SNX17-210ENST00000537606 IGLV4-69A0A075B6H9 119 aa12.61□□□□□ -0.39
SNX17-210ENST00000537606 TRGV1A0A0A0MS02 117 aa12.61□□□□□ -0.39
SNX17-210ENST00000537606 C11orf86A6NJI1 115 aa12.61□□□□□ -0.39
SNX17-210ENST00000537606 SPXQ9BT56 116 aa12.61□□□□□ -0.39
SNX17-210ENST00000537606 I3L3M4 83 aa12.6□□□□□ -0.39
SNX17-210ENST00000537606 HIGD1BQ9P298 99 aa12.6□□□□□ -0.39
SNX17-210ENST00000537606 TRRAPQ9Y4A5 3859 aa12.6□□□□□ -0.39
SNX17-210ENST00000537606 A6NDN8 102 aa12.6□□□□□ -0.39
SNX17-210ENST00000537606 CRLF1O75462 422 aa12.6□□□□□ -0.39
SNX17-210ENST00000537606 OR11H2Q8NH07 326 aa12.6□□□□□ -0.39
SNX17-210ENST00000537606 RNASE8Q8TDE3 154 aaKnown RBP12.6□□□□□ -0.39
SNX17-210ENST00000537606 CST9LQ9H4G1 147 aa12.6□□□□□ -0.39
SNX17-210ENST00000537606 CMC4P56277 68 aaPredicted RBP12.59□□□□□ -0.39
SNX17-210ENST00000537606 PRADC1Q9BSG0 188 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms