RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 FLNCQ14315 2725 aa10.54□□□□□ -0.72
USP44-203ENST00000537435 BEX4Q9NWD9 120 aaPredicted RBP10.53□□□□□ -0.72
USP44-203ENST00000537435 PIEZO1Q92508 2521 aa10.53□□□□□ -0.72
USP44-203ENST00000537435 LGALS3P17931 250 aaKnown RBP10.53□□□□□ -0.72
USP44-203ENST00000537435 SLURP1P55000 103 aa10.53□□□□□ -0.72
USP44-203ENST00000537435 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
USP44-203ENST00000537435 C18orf65Q6ZTR6 163 aa10.53□□□□□ -0.72
USP44-203ENST00000537435 SLC25A29Q8N8R3 303 aa10.53□□□□□ -0.72
USP44-203ENST00000537435 AMELXQ99217 191 aa10.53□□□□□ -0.72
USP44-203ENST00000537435 IGHV3-30P01768 117 aa10.52□□□□□ -0.72
USP44-203ENST00000537435 IGHV3-30-5P0DP03 117 aa10.52□□□□□ -0.72
USP44-203ENST00000537435 DEFB131AP59861 70 aa10.52□□□□□ -0.72
USP44-203ENST00000537435 DEFB136Q30KP8 78 aa10.52□□□□□ -0.72
USP44-203ENST00000537435 IGHV3-73A0A0B4J1V6 119 aa10.52□□□□□ -0.73
USP44-203ENST00000537435 NDUFA11Q86Y39 141 aa10.52□□□□□ -0.73
USP44-203ENST00000537435 USP9YO00507 2555 aaPredicted RBP10.52□□□□□ -0.73
USP44-203ENST00000537435 LOC107984156A0A0G2JMH3 177 aa10.51□□□□□ -0.73
USP44-203ENST00000537435 TMEM223A0PJW6 202 aa10.51□□□□□ -0.73
USP44-203ENST00000537435 J3QR89 54 aa10.51□□□□□ -0.73
USP44-203ENST00000537435 FSHBP01225 129 aa10.51□□□□□ -0.73
USP44-203ENST00000537435 ARL17AQ8IVW1 177 aa10.51□□□□□ -0.73
USP44-203ENST00000537435 DLX4Q92988 240 aaPredicted RBP10.51□□□□□ -0.73
USP44-203ENST00000537435 SPAG8Q99932 426 aaPredicted RBP10.51□□□□□ -0.73
USP44-203ENST00000537435 IGLV4-3A0A075B6K6 122 aa10.51□□□□□ -0.73
USP44-203ENST00000537435 LEPROTO15243 131 aa10.5□□□□□ -0.73
USP44-203ENST00000537435 ZNF22P17026 224 aaPredicted RBP10.5□□□□□ -0.73
USP44-203ENST00000537435 PROK1P58294 105 aa10.5□□□□□ -0.73
USP44-203ENST00000537435 TSSC4Q9Y5U2 329 aaPredicted RBP10.5□□□□□ -0.73
USP44-203ENST00000537435 IGHV3-64A0A075B6Q5 118 aa10.5□□□□□ -0.73
USP44-203ENST00000537435 PRM2P04554 102 aa10.5□□□□□ -0.73
USP44-203ENST00000537435 CFC1BP0CG36 223 aa10.5□□□□□ -0.73
USP44-203ENST00000537435 CFC1P0CG37 223 aa10.5□□□□□ -0.73
USP44-203ENST00000537435 IGHV4-31P0DP07 118 aa10.5□□□□□ -0.73
USP44-203ENST00000537435 VCX2Q9H322 139 aa10.5□□□□□ -0.73
USP44-203ENST00000537435 A0A0J9YXV3 536 aa10.49□□□□□ -0.73
USP44-203ENST00000537435 RHODO00212 210 aa10.49□□□□□ -0.73
USP44-203ENST00000537435 PSMB2P49721 201 aa10.49□□□□□ -0.73
USP44-203ENST00000537435 UBE2D3P61077 147 aa10.49□□□□□ -0.73
USP44-203ENST00000537435 UBE2D2P62837 147 aa10.49□□□□□ -0.73
USP44-203ENST00000537435 CREBBPQ92793 2442 aa10.49□□□□□ -0.73
USP44-203ENST00000537435 RBMY1BA6NDE4 496 aaKnown RBP10.49□□□□□ -0.73
USP44-203ENST00000537435 RBMY1EA6NEQ0 496 aaKnown RBP10.49□□□□□ -0.73
USP44-203ENST00000537435 H3BMM0 161 aa10.49□□□□□ -0.73
USP44-203ENST00000537435 RBMY1DP0C7P1 496 aaKnown RBP10.49□□□□□ -0.73
USP44-203ENST00000537435 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
USP44-203ENST00000537435 IGSF10Q6WRI0 2623 aa10.49□□□□□ -0.73
USP44-203ENST00000537435 EDA2RQ9HAV5 297 aa10.48□□□□□ -0.73
USP44-203ENST00000537435 UTP20O75691 2785 aaKnown RBP10.48□□□□□ -0.73
USP44-203ENST00000537435 INSL3P51460 131 aa10.48□□□□□ -0.73
USP44-203ENST00000537435 DUX3Q96PT4 197 aa10.48□□□□□ -0.73
USP44-203ENST00000537435 SMCPP49901 116 aaPredicted RBP10.47□□□□□ -0.73
USP44-203ENST00000537435 ZANQ9Y493 2812 aa10.47□□□□□ -0.73
USP44-203ENST00000537435 FBN2P35556 2912 aa10.47□□□□□ -0.73
USP44-203ENST00000537435 GAGE12HA6NDE8 117 aa10.47□□□□□ -0.73
USP44-203ENST00000537435 A8MTW9 85 aa10.47□□□□□ -0.73
USP44-203ENST00000537435 PRB1P04280 392 aa10.47□□□□□ -0.73
USP44-203ENST00000537435 CD28P10747 220 aa10.47□□□□□ -0.73
USP44-203ENST00000537435 LYRM7Q5U5X0 104 aa10.47□□□□□ -0.73
USP44-203ENST00000537435 TMEM61Q8N0U2 210 aa10.47□□□□□ -0.73
USP44-203ENST00000537435 C10orf126Q8N4M7 172 aa10.47□□□□□ -0.73
USP44-203ENST00000537435 CACNA1AO00555 2505 aa10.47□□□□□ -0.73
USP44-203ENST00000537435 ACACBO00763 2458 aa10.46□□□□□ -0.73
USP44-203ENST00000537435 TMEM238C9JI98 176 aa10.46□□□□□ -0.73
USP44-203ENST00000537435 Q5PR19 223 aa10.46□□□□□ -0.73
USP44-203ENST00000537435 GTSF1LQ9H1H1 148 aa10.46□□□□□ -0.73
USP44-203ENST00000537435 POLQO75417 2590 aa10.46□□□□□ -0.74
USP44-203ENST00000537435 M0R2P5 195 aa10.46□□□□□ -0.74
USP44-203ENST00000537435 CEMP1Q6PRD7 247 aaPredicted RBP10.46□□□□□ -0.74
USP44-203ENST00000537435 PYGO1Q9Y3Y4 419 aa10.46□□□□□ -0.74
USP44-203ENST00000537435 TNFRSF18Q9Y5U5 241 aa10.46□□□□□ -0.74
USP44-203ENST00000537435 ANKRD17O75179 2603 aaKnown RBP10.46□□□□□ -0.74
USP44-203ENST00000537435 TRAV2A0A0B4J234 112 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 A8MWV9 139 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 FAM104AQ969W3 186 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 SIGMAR1Q99720 223 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 Q9UF83 564 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 PRO1854Q9UHT4 67 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 A4D1N5 150 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 TCL1BO95988 128 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 ZNF415Q09FC8 603 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 KHDC1LQ5JSQ8 128 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 ZNF418Q8TF45 676 aaPredicted RBP10.45□□□□□ -0.74
USP44-203ENST00000537435 PEMTQ9UBM1 199 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 MYO18BQ8IUG5 2567 aa10.45□□□□□ -0.74
USP44-203ENST00000537435 AZU1P20160 251 aa10.44□□□□□ -0.74
USP44-203ENST00000537435 KRTAP10-9P60411 292 aa10.44□□□□□ -0.74
USP44-203ENST00000537435 Q6ZSN1 163 aa10.44□□□□□ -0.74
USP44-203ENST00000537435 SPXQ9BT56 116 aa10.44□□□□□ -0.74
USP44-203ENST00000537435 C1QTNF4Q9BXJ3 329 aa10.44□□□□□ -0.74
USP44-203ENST00000537435 RNASE13Q5GAN3 156 aaKnown RBP10.44□□□□□ -0.74
USP44-203ENST00000537435 Q8N2B8 174 aa10.44□□□□□ -0.74
USP44-203ENST00000537435 SPATA25Q9BR10 227 aa10.44□□□□□ -0.74
USP44-203ENST00000537435 FOXI1Q12951 378 aa10.43□□□□□ -0.74
USP44-203ENST00000537435 HIST2H2BDQ6DRA6 164 aa10.43□□□□□ -0.74
USP44-203ENST00000537435 MAP6D1Q9H9H5 199 aa10.43□□□□□ -0.74
USP44-203ENST00000537435 EIF4EBP3O60516 100 aaPredicted RBP10.43□□□□□ -0.74
USP44-203ENST00000537435 IGHV3-30-3P0DP02 117 aa10.43□□□□□ -0.74
USP44-203ENST00000537435 MRPS36P82909 103 aaKnown RBP10.43□□□□□ -0.74
USP44-203ENST00000537435 MUSTN1Q8IVN3 82 aa10.43□□□□□ -0.74
USP44-203ENST00000537435 ATP6V0E2Q8NHE4 81 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms