RNA–Protein interactions for RNA: ENST00000537323.5

PABPC1L-217, Transcript of poly(A) binding protein cytoplasmic 1 like, humanhuman

TSL 1 (best) BASIC

Gene PABPC1L, Length 1,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1L-217ENST00000537323 Q96MF0 132 aa13.17□□□□□ -0.3
PABPC1L-217ENST00000537323 EMP1P54849 157 aa13.16□□□□□ -0.3
PABPC1L-217ENST00000537323 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
PABPC1L-217ENST00000537323 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
PABPC1L-217ENST00000537323 SORL1Q92673 2214 aa13.16□□□□□ -0.3
PABPC1L-217ENST00000537323 FAM208BQ5VWN6 2430 aa13.16□□□□□ -0.3
PABPC1L-217ENST00000537323 PIK3CD-AS1Q5SR53 167 aa13.15□□□□□ -0.3
PABPC1L-217ENST00000537323 NFE4Q86UQ8 179 aa13.15□□□□□ -0.3
PABPC1L-217ENST00000537323 PLEKHB2Q96CS7 222 aa13.15□□□□□ -0.3
PABPC1L-217ENST00000537323 G3V4G9 280 aa13.15□□□□□ -0.3
PABPC1L-217ENST00000537323 P0DMU3 169 aa13.15□□□□□ -0.3
PABPC1L-217ENST00000537323 FAM231AP0DMU4 169 aa13.15□□□□□ -0.3
PABPC1L-217ENST00000537323 FAM231CP0DMU5 169 aa13.15□□□□□ -0.3
PABPC1L-217ENST00000537323 TMEM170BQ5T4T1 132 aa13.15□□□□□ -0.3
PABPC1L-217ENST00000537323 TMEM86BQ8N661 226 aa13.15□□□□□ -0.3
PABPC1L-217ENST00000537323 SPAG8Q99932 426 aaPredicted RBP13.15□□□□□ -0.3
PABPC1L-217ENST00000537323 TMEM61Q8N0U2 210 aa13.14□□□□□ -0.31
PABPC1L-217ENST00000537323 KLHL30-AS1Q8NEE0 82 aa13.14□□□□□ -0.31
PABPC1L-217ENST00000537323 ZNRF2Q8NHG8 242 aa13.14□□□□□ -0.31
PABPC1L-217ENST00000537323 DYNLRB2Q8TF09 96 aa13.14□□□□□ -0.31
PABPC1L-217ENST00000537323 PTH2Q96A98 100 aa13.14□□□□□ -0.31
PABPC1L-217ENST00000537323 CLUHP3Q96NS8 147 aa13.14□□□□□ -0.31
PABPC1L-217ENST00000537323 DUX3Q96PT4 197 aa13.14□□□□□ -0.31
PABPC1L-217ENST00000537323 FBN2P35556 2912 aa13.14□□□□□ -0.31
PABPC1L-217ENST00000537323 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 RBMY1EA6NEQ0 496 aaKnown RBP13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 A8MWV9 139 aa13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 M0R2P5 195 aa13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 SAP30O75446 220 aa13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 RBMY1DP0C7P1 496 aaKnown RBP13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 ZNF415Q09FC8 603 aa13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 SRSF9Q13242 221 aaKnown RBP eCLIP13.13□□□□□ -0.312e-9■□□□□ 8.6
PABPC1L-217ENST00000537323 ZNF462Q96JM2 2506 aa13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 A0A1B0GV72 72 aa13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 TEX29Q8N6K0 151 aa13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 USP24Q9UPU5 2620 aa13.13□□□□□ -0.31
PABPC1L-217ENST00000537323 MAP6D1Q9H9H5 199 aa13.12□□□□□ -0.31
PABPC1L-217ENST00000537323 POLQO75417 2590 aa13.11□□□□□ -0.31
PABPC1L-217ENST00000537323 A0A0J9YY99 117 aa13.11□□□□□ -0.31
PABPC1L-217ENST00000537323 HTN1P15515 57 aa13.11□□□□□ -0.31
PABPC1L-217ENST00000537323 DLX4Q92988 240 aaPredicted RBP13.11□□□□□ -0.31
PABPC1L-217ENST00000537323 LINC00467Q9BRT7 94 aa13.11□□□□□ -0.31
PABPC1L-217ENST00000537323 SPANXB1Q9NS25 103 aaPredicted RBP13.11□□□□□ -0.31
PABPC1L-217ENST00000537323 UBR5O95071 2799 aaPredicted RBP13.11□□□□□ -0.31
PABPC1L-217ENST00000537323 KRTAP1-3Q8IUG1 177 aa13.11□□□□□ -0.31
PABPC1L-217ENST00000537323 RAX2Q96IS3 184 aa13.11□□□□□ -0.31
PABPC1L-217ENST00000537323 ZANQ9Y493 2812 aa13.11□□□□□ -0.31
PABPC1L-217ENST00000537323 UBE2D1P51668 147 aa13.1□□□□□ -0.31
PABPC1L-217ENST00000537323 DEFB114Q30KQ6 69 aa13.1□□□□□ -0.31
PABPC1L-217ENST00000537323 IGLV4-3A0A075B6K6 122 aa13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 F8W1H4 67 aa13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 J3QQQ9 107 aa13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 LEPROTO15243 131 aa13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 LGALS3P17931 250 aaKnown RBP13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 TSPEAR-AS2P59090 65 aa13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 OPRPNQ99935 248 aaPredicted RBP13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 VCX2Q9H322 139 aa13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 PYGO1Q9Y3Y4 419 aa13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 TNFRSF18Q9Y5U5 241 aa13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 TMEM223A0PJW6 202 aa13.09□□□□□ -0.31
PABPC1L-217ENST00000537323 CRYBA4P53673 196 aa13.08□□□□□ -0.32
PABPC1L-217ENST00000537323 SLC25A29Q8N8R3 303 aa13.08□□□□□ -0.32
PABPC1L-217ENST00000537323 SPXQ9BT56 116 aa13.08□□□□□ -0.32
PABPC1L-217ENST00000537323 LRRK2Q5S007 2527 aa13.08□□□□□ -0.32
PABPC1L-217ENST00000537323 NACAE9PAV3 2078 aa13.08□□□□□ -0.32
PABPC1L-217ENST00000537323 IGHV3-73A0A0B4J1V6 119 aa13.07□□□□□ -0.32
PABPC1L-217ENST00000537323 INSP01308 110 aa13.07□□□□□ -0.32
PABPC1L-217ENST00000537323 PTPN13Q12923 2485 aa13.07□□□□□ -0.32
PABPC1L-217ENST00000537323 RHODO00212 210 aa13.07□□□□□ -0.32
PABPC1L-217ENST00000537323 Q6ZSV7 163 aa13.07□□□□□ -0.32
PABPC1L-217ENST00000537323 AMELXQ99217 191 aa13.07□□□□□ -0.32
PABPC1L-217ENST00000537323 LINC01587Q99440 93 aa13.07□□□□□ -0.32
PABPC1L-217ENST00000537323 PGPEP1Q9NXJ5 209 aa13.07□□□□□ -0.32
PABPC1L-217ENST00000537323 TRAV25A0A0B4J276 109 aa13.06□□□□□ -0.32
PABPC1L-217ENST00000537323 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
PABPC1L-217ENST00000537323 MRPL16Q9NX20 251 aaKnown RBP13.06□□□□□ -0.32
PABPC1L-217ENST00000537323 MXRA5Q9NR99 2828 aa13.06□□□□□ -0.32
PABPC1L-217ENST00000537323 CREBBPQ92793 2442 aa13.06□□□□□ -0.32
PABPC1L-217ENST00000537323 PROK1P58294 105 aa13.05□□□□□ -0.32
PABPC1L-217ENST00000537323 CD28P10747 220 aa13.05□□□□□ -0.32
PABPC1L-217ENST00000537323 RPL24P83731 157 aaKnown RBP13.05□□□□□ -0.32
PABPC1L-217ENST00000537323 CFAP126Q5VTH2 177 aa13.05□□□□□ -0.32
PABPC1L-217ENST00000537323 C11orf72Q8NBR9 251 aa13.05□□□□□ -0.32
PABPC1L-217ENST00000537323 DNAJC30Q96LL9 226 aa13.05□□□□□ -0.32
PABPC1L-217ENST00000537323 NAV2Q8IVL1 2488 aa13.05□□□□□ -0.32
PABPC1L-217ENST00000537323 ZFYVE26Q68DK2 2539 aa13.04□□□□□ -0.32
PABPC1L-217ENST00000537323 A0A0J9YXV3 536 aa13.04□□□□□ -0.32
PABPC1L-217ENST00000537323 H3BMG7 143 aa13.04□□□□□ -0.32
PABPC1L-217ENST00000537323 IGHV3-30P01768 117 aa13.04□□□□□ -0.32
PABPC1L-217ENST00000537323 IGHV3-30-5P0DP03 117 aa13.04□□□□□ -0.32
PABPC1L-217ENST00000537323 BEAN1Q3B7T3 259 aa13.04□□□□□ -0.32
PABPC1L-217ENST00000537323 PRM2P04554 102 aa13.03□□□□□ -0.32
PABPC1L-217ENST00000537323 DNAJC9-AS1A6NH13 148 aa13.03□□□□□ -0.32
PABPC1L-217ENST00000537323 GAGE13Q4V321 117 aa13.03□□□□□ -0.32
PABPC1L-217ENST00000537323 IGHV3-53P01767 116 aa13.02□□□□□ -0.32
PABPC1L-217ENST00000537323 TEX15Q9BXT5 2789 aa13.02□□□□□ -0.33
PABPC1L-217ENST00000537323 TEX48A0A1B0GUV7 120 aa13.01□□□□□ -0.33
PABPC1L-217ENST00000537323 RS1O15537 224 aa13.01□□□□□ -0.33
PABPC1L-217ENST00000537323 APOMO95445 188 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms