RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 COMMD7Q86VX2 200 aa7.67□□□□□ -1.18
TNFRSF1A-208ENST00000536194 C6orf223Q8N319 242 aa7.67□□□□□ -1.18
TNFRSF1A-208ENST00000536194 TNFRSF18Q9Y5U5 241 aa7.67□□□□□ -1.18
TNFRSF1A-208ENST00000536194 FRAS1Q86XX4 4008 aa7.67□□□□□ -1.18
TNFRSF1A-208ENST00000536194 LINC00862A6NCI5 91 aa7.66□□□□□ -1.18
TNFRSF1A-208ENST00000536194 LINC01556Q5JQF7 62 aa7.66□□□□□ -1.18
TNFRSF1A-208ENST00000536194 GATD1Q8NB37 220 aa7.66□□□□□ -1.18
TNFRSF1A-208ENST00000536194 NAT8BQ9UHF3 227 aa7.66□□□□□ -1.18
TNFRSF1A-208ENST00000536194 EPPK1P58107 5090 aaKnown RBP7.66□□□□□ -1.18
TNFRSF1A-208ENST00000536194 TRAV8-6A0A0B4J262 113 aa7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 TMEM218A2RU14 115 aa7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 H7C1H1 209 aa7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 GAS8-AS1O95177 125 aa7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 PNRC1Q12796 327 aaPredicted RBP7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 RASL11AQ6T310 242 aa7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 Q6ZRN7 208 aaPredicted RBP7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 NTM-AS1Q6ZSK4 140 aa7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 LINC00336Q6ZUF6 198 aa7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 BORCS7Q96B45 105 aa7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 RNF185Q96GF1 192 aa7.65□□□□□ -1.18
TNFRSF1A-208ENST00000536194 A0A087WWC5 75 aa7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 A0A1B0GVY2 172 aa7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 PRSS29PA6NIE9 313 aa7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 IGHV3-30P01768 117 aa7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 IGHV3-33P01772 117 aa7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 IGHV3-30-3P0DP02 117 aa7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 IGHV3-30-5P0DP03 117 aa7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 RPL39LQ96EH5 51 aaKnown RBP7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 DNAJC30Q96LL9 226 aa7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 TMEM191AQ9H0A3 160 aa7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 NIT2Q9NQR4 276 aa7.64□□□□□ -1.19
TNFRSF1A-208ENST00000536194 TRBV6-8A0A0A6YYG3 113 aa7.63□□□□□ -1.19
TNFRSF1A-208ENST00000536194 TNP2Q05952 138 aa7.63□□□□□ -1.19
TNFRSF1A-208ENST00000536194 RIGQ13278 110 aa7.63□□□□□ -1.19
TNFRSF1A-208ENST00000536194 SMIM15Q7Z3B0 74 aa7.63□□□□□ -1.19
TNFRSF1A-208ENST00000536194 DAZ4Q86SG3 579 aaKnown RBP7.63□□□□□ -1.19
TNFRSF1A-208ENST00000536194 NIT1Q86X76 327 aa7.63□□□□□ -1.19
TNFRSF1A-208ENST00000536194 AMN1Q8IY45 258 aa7.63□□□□□ -1.19
TNFRSF1A-208ENST00000536194 DAZ3Q9NR90 486 aaKnown RBP7.63□□□□□ -1.19
TNFRSF1A-208ENST00000536194 FAT2Q9NYQ8 4349 aa7.63□□□□□ -1.19
TNFRSF1A-208ENST00000536194 A0A1B0GXF2 115 aa7.62□□□□□ -1.19
TNFRSF1A-208ENST00000536194 F8W036 122 aa7.62□□□□□ -1.19
TNFRSF1A-208ENST00000536194 K7EP13 123 aa7.62□□□□□ -1.19
TNFRSF1A-208ENST00000536194 PPP1R2P9O14990 202 aa7.62□□□□□ -1.19
TNFRSF1A-208ENST00000536194 BTF3P20290 206 aaKnown RBP7.62□□□□□ -1.19
TNFRSF1A-208ENST00000536194 RAB4AP20338 218 aa7.62□□□□□ -1.19
TNFRSF1A-208ENST00000536194 DEFB104AQ8WTQ1 72 aa7.62□□□□□ -1.19
TNFRSF1A-208ENST00000536194 ANAPC16Q96DE5 110 aa7.62□□□□□ -1.19
TNFRSF1A-208ENST00000536194 SEC11CQ9BY50 192 aa7.62□□□□□ -1.19
TNFRSF1A-208ENST00000536194 DNAH17Q9UFH2 4485 aa7.62□□□□□ -1.19
TNFRSF1A-208ENST00000536194 TRAV9-2A0A087WT02 112 aa7.61□□□□□ -1.19
TNFRSF1A-208ENST00000536194 IBA57-AS1B1ANH7 110 aa7.61□□□□□ -1.19
TNFRSF1A-208ENST00000536194 RPS10P46783 165 aaKnown RBP7.61□□□□□ -1.19
TNFRSF1A-208ENST00000536194 MRPL54Q6P161 138 aaKnown RBP7.61□□□□□ -1.19
TNFRSF1A-208ENST00000536194 C10orf126Q8N4M7 172 aa7.61□□□□□ -1.19
TNFRSF1A-208ENST00000536194 FRZBQ92765 325 aa7.61□□□□□ -1.19
TNFRSF1A-208ENST00000536194 SMKR1H3BMG3 65 aa7.6□□□□□ -1.19
TNFRSF1A-208ENST00000536194 MT-ND4LP03901 98 aa7.6□□□□□ -1.19
TNFRSF1A-208ENST00000536194 CAMPP49913 170 aa7.6□□□□□ -1.19
TNFRSF1A-208ENST00000536194 HBBP68871 147 aa7.6□□□□□ -1.19
TNFRSF1A-208ENST00000536194 C10orf91Q5T1B1 145 aa7.6□□□□□ -1.19
TNFRSF1A-208ENST00000536194 NCR2O95944 276 aa7.59□□□□□ -1.19
TNFRSF1A-208ENST00000536194 IQCJQ1A5X6 159 aa7.59□□□□□ -1.19
TNFRSF1A-208ENST00000536194 MPV17L2Q567V2 206 aa7.59□□□□□ -1.19
TNFRSF1A-208ENST00000536194 TMEM97Q5BJF2 176 aa7.59□□□□□ -1.19
TNFRSF1A-208ENST00000536194 FAM104BQ5XKR9 115 aa7.59□□□□□ -1.19
TNFRSF1A-208ENST00000536194 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.59□□□□□ -1.19
TNFRSF1A-208ENST00000536194 MRAP2Q96G30 205 aa7.59□□□□□ -1.19
TNFRSF1A-208ENST00000536194 CARHSP1Q9Y2V2 147 aaKnown RBP7.59□□□□□ -1.19
TNFRSF1A-208ENST00000536194 TRBV25-1A0A075B6N4 114 aa7.58□□□□□ -1.2
TNFRSF1A-208ENST00000536194 IGHV1-24A0A0C4DH33 117 aa7.58□□□□□ -1.2
TNFRSF1A-208ENST00000536194 TRBV6-5A0A0K0K1A5 114 aa7.58□□□□□ -1.2
TNFRSF1A-208ENST00000536194 A0A1B0GW15 77 aa7.58□□□□□ -1.2
TNFRSF1A-208ENST00000536194 SDHAF1A6NFY7 115 aa7.58□□□□□ -1.2
TNFRSF1A-208ENST00000536194 MRPL51Q4U2R6 128 aaKnown RBP7.58□□□□□ -1.2
TNFRSF1A-208ENST00000536194 NRACQ8N912 160 aa7.58□□□□□ -1.2
TNFRSF1A-208ENST00000536194 CHCHD5Q9BSY4 110 aa7.58□□□□□ -1.2
TNFRSF1A-208ENST00000536194 Q9HAA7 133 aa7.58□□□□□ -1.2
TNFRSF1A-208ENST00000536194 GAGE6Q13070 117 aa7.57□□□□□ -1.2
TNFRSF1A-208ENST00000536194 LAGE3Q14657 143 aa7.57□□□□□ -1.2
TNFRSF1A-208ENST00000536194 ATP5L2Q7Z4Y8 100 aa7.57□□□□□ -1.2
TNFRSF1A-208ENST00000536194 NFE4Q86UQ8 179 aa7.57□□□□□ -1.2
TNFRSF1A-208ENST00000536194 Q8N976 141 aa7.57□□□□□ -1.2
TNFRSF1A-208ENST00000536194 TMEM70Q9BUB7 260 aa7.57□□□□□ -1.2
TNFRSF1A-208ENST00000536194 CHCHD7Q9BUK0 85 aa7.57□□□□□ -1.2
TNFRSF1A-208ENST00000536194 KLK12Q9UKR0 248 aa7.57□□□□□ -1.2
TNFRSF1A-208ENST00000536194 URGCP-MRPS24S4R325 110 aa7.57□□□□□ -1.2
TNFRSF1A-208ENST00000536194 A0A087WX48 190 aa7.56□□□□□ -1.2
TNFRSF1A-208ENST00000536194 TMEM262E9PQX1 116 aa7.56□□□□□ -1.2
TNFRSF1A-208ENST00000536194 POLR2KP53803 58 aaKnown RBP7.56□□□□□ -1.2
TNFRSF1A-208ENST00000536194 COTL1Q14019 142 aa7.56□□□□□ -1.2
TNFRSF1A-208ENST00000536194 KCNIP4Q6PIL6 250 aa7.56□□□□□ -1.2
TNFRSF1A-208ENST00000536194 ATRAIDQ6UW56 229 aa7.56□□□□□ -1.2
TNFRSF1A-208ENST00000536194 TMEM243Q9BU79 118 aa7.56□□□□□ -1.2
TNFRSF1A-208ENST00000536194 ST20Q9HBF5 79 aa7.56□□□□□ -1.2
TNFRSF1A-208ENST00000536194 PKD1P98161 4303 aa7.56□□□□□ -1.2
TNFRSF1A-208ENST00000536194 TSHBP01222 138 aa7.55□□□□□ -1.2
TNFRSF1A-208ENST00000536194 RBX1P62877 108 aa7.55□□□□□ -1.2
TNFRSF1A-208ENST00000536194 CLRN3Q8NCR9 226 aa7.55□□□□□ -1.2
TNFRSF1A-208ENST00000536194 IMMP2LQ96T52 175 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms