RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 A0A0J9YY99 117 aa13.46□□□□□ -0.26
RAB40C-203ENST00000535977 M0QXV9 152 aa13.46□□□□□ -0.26
RAB40C-203ENST00000535977 SPANXA1Q9NS26 97 aa13.45□□□□□ -0.26
RAB40C-203ENST00000535977 PPP1R17O96001 155 aa13.45□□□□□ -0.26
RAB40C-203ENST00000535977 Q6ZS46 218 aa13.45□□□□□ -0.26
RAB40C-203ENST00000535977 DPH3P1Q9H4G8 78 aa13.45□□□□□ -0.26
RAB40C-203ENST00000535977 PRO1854Q9UHT4 67 aa13.45□□□□□ -0.26
RAB40C-203ENST00000535977 TRAV8-4A0A0B4J246 113 aa13.44□□□□□ -0.26
RAB40C-203ENST00000535977 PHLDA3Q9Y5J5 127 aa13.44□□□□□ -0.26
RAB40C-203ENST00000535977 IGHV3-30P01768 117 aa13.44□□□□□ -0.26
RAB40C-203ENST00000535977 IGHV3-30-5P0DP03 117 aa13.44□□□□□ -0.26
RAB40C-203ENST00000535977 BAALCQ8WXS3 180 aa13.44□□□□□ -0.26
RAB40C-203ENST00000535977 DOPEY2Q9Y3R5 2298 aa13.44□□□□□ -0.26
RAB40C-203ENST00000535977 J3QLI3 93 aa13.43□□□□□ -0.26
RAB40C-203ENST00000535977 TOMM6Q96B49 74 aa13.43□□□□□ -0.26
RAB40C-203ENST00000535977 TEX49A0A1B0GTD5 131 aa13.43□□□□□ -0.26
RAB40C-203ENST00000535977 M0R381 172 aa13.43□□□□□ -0.26
RAB40C-203ENST00000535977 ORMDL2Q53FV1 153 aa13.43□□□□□ -0.26
RAB40C-203ENST00000535977 LINC01356Q8N9X3 169 aa13.43□□□□□ -0.26
RAB40C-203ENST00000535977 SMIM2Q9BVW6 85 aa13.43□□□□□ -0.26
RAB40C-203ENST00000535977 RNASE4P34096 147 aaKnown RBP13.42□□□□□ -0.26
RAB40C-203ENST00000535977 CHCHD5Q9BSY4 110 aa13.42□□□□□ -0.26
RAB40C-203ENST00000535977 DOPEY1Q5JWR5 2465 aa13.42□□□□□ -0.26
RAB40C-203ENST00000535977 USP9YO00507 2555 aaPredicted RBP13.41□□□□□ -0.26
RAB40C-203ENST00000535977 PSMB8P28062 276 aa13.41□□□□□ -0.26
RAB40C-203ENST00000535977 LINC01587Q99440 93 aa13.41□□□□□ -0.26
RAB40C-203ENST00000535977 J3KRW8 73 aa13.41□□□□□ -0.26
RAB40C-203ENST00000535977 AVPP01185 164 aa13.41□□□□□ -0.26
RAB40C-203ENST00000535977 TMEM126AQ9H061 195 aa13.41□□□□□ -0.26
RAB40C-203ENST00000535977 TRAV2A0A0B4J234 112 aa13.4□□□□□ -0.27
RAB40C-203ENST00000535977 H7C2G1 150 aa13.4□□□□□ -0.27
RAB40C-203ENST00000535977 SUMO2P61956 95 aaKnown RBP13.4□□□□□ -0.27
RAB40C-203ENST00000535977 KLLNB2CW77 178 aa13.39□□□□□ -0.27
RAB40C-203ENST00000535977 NXPH4O95158 308 aa13.39□□□□□ -0.27
RAB40C-203ENST00000535977 ELANEP08246 267 aa13.39□□□□□ -0.27
RAB40C-203ENST00000535977 POM121L12Q8N7R1 296 aa13.39□□□□□ -0.27
RAB40C-203ENST00000535977 EIF4EBP3O60516 100 aaPredicted RBP13.38□□□□□ -0.27
RAB40C-203ENST00000535977 PLA2G2AP14555 144 aa13.38□□□□□ -0.27
RAB40C-203ENST00000535977 C2orf66Q6UXQ4 117 aa13.38□□□□□ -0.27
RAB40C-203ENST00000535977 SLC25A29Q8N8R3 303 aa13.38□□□□□ -0.27
RAB40C-203ENST00000535977 RPL13AP40429 203 aaKnown RBP13.37□□□□□ -0.27
RAB40C-203ENST00000535977 EMP1P54849 157 aa13.37□□□□□ -0.27
RAB40C-203ENST00000535977 DCANP1Q8TF63 244 aa13.37□□□□□ -0.27
RAB40C-203ENST00000535977 C11orf86A6NJI1 115 aa13.37□□□□□ -0.27
RAB40C-203ENST00000535977 F6UB75 175 aa13.37□□□□□ -0.27
RAB40C-203ENST00000535977 IGHV3-33P01772 117 aa13.37□□□□□ -0.27
RAB40C-203ENST00000535977 RNASE3P12724 160 aaKnown RBP13.37□□□□□ -0.27
RAB40C-203ENST00000535977 TSPEAR-AS2P59090 65 aa13.37□□□□□ -0.27
RAB40C-203ENST00000535977 DEFB112Q30KQ8 113 aa13.37□□□□□ -0.27
RAB40C-203ENST00000535977 LINC01620Q4KN68 170 aa13.37□□□□□ -0.27
RAB40C-203ENST00000535977 CSDC2Q9Y534 153 aaKnown RBP13.37□□□□□ -0.27
RAB40C-203ENST00000535977 IGKV3-7A0A075B6H7 116 aa13.36□□□□□ -0.27
RAB40C-203ENST00000535977 C14orf178Q8N769 122 aaPredicted RBP13.36□□□□□ -0.27
RAB40C-203ENST00000535977 HECTD1Q9ULT8 2610 aa13.36□□□□□ -0.27
RAB40C-203ENST00000535977 NRGNQ92686 78 aa13.36□□□□□ -0.27
RAB40C-203ENST00000535977 A4D1N5 150 aa13.35□□□□□ -0.27
RAB40C-203ENST00000535977 LGALS9O00182 355 aa13.35□□□□□ -0.27
RAB40C-203ENST00000535977 GNRH2O43555 120 aa13.35□□□□□ -0.27
RAB40C-203ENST00000535977 CELSR2Q9HCU4 2923 aa13.35□□□□□ -0.27
RAB40C-203ENST00000535977 IGHV4-59P01825 116 aa13.35□□□□□ -0.27
RAB40C-203ENST00000535977 NBPF19A0A087WUL8 3843 aa13.35□□□□□ -0.27
RAB40C-203ENST00000535977 H3BMM0 161 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 CRYGDP07320 174 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 DEFB1P60022 68 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 ATXN8Q156A1 80 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 UBE2WQ96B02 151 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 CSMD1Q96PZ7 3565 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 J3QKU1 62 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 P0DMU3 169 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 FAM231AP0DMU4 169 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 FAM231CP0DMU5 169 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 SNRPD3P62318 126 aaKnown RBP13.34□□□□□ -0.27
RAB40C-203ENST00000535977 TMEM263Q8WUH6 116 aaKnown RBP13.34□□□□□ -0.27
RAB40C-203ENST00000535977 PTPN13Q12923 2485 aa13.34□□□□□ -0.27
RAB40C-203ENST00000535977 IGLV4-69A0A075B6H9 119 aa13.33□□□□□ -0.27
RAB40C-203ENST00000535977 IGHV4OR15-8A0A075B7B6 117 aa13.33□□□□□ -0.27
RAB40C-203ENST00000535977 A0A087WW49 117 aa13.33□□□□□ -0.27
RAB40C-203ENST00000535977 DUSP14O95147 198 aaKnown RBP13.33□□□□□ -0.27
RAB40C-203ENST00000535977 MGPP08493 103 aa13.33□□□□□ -0.27
RAB40C-203ENST00000535977 LINC00694P0DN24 101 aa13.33□□□□□ -0.27
RAB40C-203ENST00000535977 HERVK_113P61574 105 aa13.33□□□□□ -0.27
RAB40C-203ENST00000535977 ZNF56Q15929 161 aa13.33□□□□□ -0.27
RAB40C-203ENST00000535977 RPL39LQ96EH5 51 aaKnown RBP13.33□□□□□ -0.28
RAB40C-203ENST00000535977 ASH1LQ9NR48 2969 aaKnown RBP13.33□□□□□ -0.28
RAB40C-203ENST00000535977 A0A096LNT2 108 aa13.33□□□□□ -0.28
RAB40C-203ENST00000535977 TRBV10-2A0A0K0K1G8 114 aa13.32□□□□□ -0.28
RAB40C-203ENST00000535977 BEX4Q9NWD9 120 aaPredicted RBP13.32□□□□□ -0.28
RAB40C-203ENST00000535977 Q1RN00 199 aa13.31□□□□□ -0.28
RAB40C-203ENST00000535977 KIF25-AS1Q9Y6Z4 181 aa13.31□□□□□ -0.28
RAB40C-203ENST00000535977 MRPL23Q16540 153 aaKnown RBP13.31□□□□□ -0.28
RAB40C-203ENST00000535977 DNAJC30Q96LL9 226 aa13.31□□□□□ -0.28
RAB40C-203ENST00000535977 LINC01600Q96MT4 127 aa13.31□□□□□ -0.28
RAB40C-203ENST00000535977 AMELXQ99217 191 aa13.31□□□□□ -0.28
RAB40C-203ENST00000535977 FLNBO75369 2602 aaKnown RBP13.31□□□□□ -0.28
RAB40C-203ENST00000535977 CSMD2Q7Z408 3487 aa13.3□□□□□ -0.28
RAB40C-203ENST00000535977 LOC107984640A0A0U1RRK4 108 aa13.3□□□□□ -0.28
RAB40C-203ENST00000535977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.3□□□□□ -0.284e-6■■■■□ 21.3
RAB40C-203ENST00000535977 C5orf47Q569G3 176 aa13.3□□□□□ -0.28
RAB40C-203ENST00000535977 SPG11Q96JI7 2443 aa13.29□□□□□ -0.28
RAB40C-203ENST00000535977 K7EQG2 157 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms