RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 TRAV1-1A0A0B4J248 108 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 RHODO00212 210 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 DNAH10OSP0CZ25 163 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 GZMBP10144 247 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 GNG4P50150 75 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 NKX2-5P52952 324 aaPredicted RBP6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 ERVFC1-1P60608 527 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 MEF2BQ02080 365 aaPredicted RBP6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 ZNF56Q15929 161 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 DNLZQ5SXM8 178 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 ALKAL2Q6UX46 152 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 C9orf62Q8N4C0 152 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 OR10AG1Q8NH19 301 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 SFRP2Q96HF1 295 aa6.04□□□□□ -1.44
CCDC90B-219ENST00000534753 A0A0A0MQY5 61 aa6.03□□□□□ -1.44
CCDC90B-219ENST00000534753 PDE6DO43924 150 aa6.03□□□□□ -1.44
CCDC90B-219ENST00000534753 CEBPGP53567 150 aa6.03□□□□□ -1.44
CCDC90B-219ENST00000534753 PIK3CD-AS1Q5SR53 167 aa6.03□□□□□ -1.44
CCDC90B-219ENST00000534753 LELP1Q5T871 98 aa6.03□□□□□ -1.44
CCDC90B-219ENST00000534753 UFSP1Q6NVU6 142 aa6.03□□□□□ -1.44
CCDC90B-219ENST00000534753 Q6ZRN7 208 aaPredicted RBP6.03□□□□□ -1.44
CCDC90B-219ENST00000534753 C10orf126Q8N4M7 172 aa6.03□□□□□ -1.44
CCDC90B-219ENST00000534753 OR2D3Q8NGH3 330 aa6.03□□□□□ -1.44
CCDC90B-219ENST00000534753 SCRT2Q9NQ03 307 aa6.03□□□□□ -1.44
CCDC90B-219ENST00000534753 A0A1B0GVG6 124 aa6.02□□□□□ -1.45
CCDC90B-219ENST00000534753 RBFOX3A6NFN3 312 aa6.02□□□□□ -1.45
CCDC90B-219ENST00000534753 SMIM17P0DL12 118 aa6.02□□□□□ -1.45
CCDC90B-219ENST00000534753 BCL2P10415 239 aa6.02□□□□□ -1.45
CCDC90B-219ENST00000534753 C11orf52Q96A22 123 aa6.02□□□□□ -1.45
CCDC90B-219ENST00000534753 VAX2Q9UIW0 290 aa6.02□□□□□ -1.45
CCDC90B-219ENST00000534753 PKHD1P08F94 4074 aa6.02□□□□□ -1.45
CCDC90B-219ENST00000534753 P01737 135 aa6.01□□□□□ -1.45
CCDC90B-219ENST00000534753 MGPP08493 103 aa6.01□□□□□ -1.45
CCDC90B-219ENST00000534753 RPL36AP83881 106 aaKnown RBP6.01□□□□□ -1.45
CCDC90B-219ENST00000534753 LINC01556Q5JQF7 62 aa6.01□□□□□ -1.45
CCDC90B-219ENST00000534753 CFAP161Q6P656 301 aa6.01□□□□□ -1.45
CCDC90B-219ENST00000534753 RPL36ALQ969Q0 106 aaKnown RBP6.01□□□□□ -1.45
CCDC90B-219ENST00000534753 URGCP-MRPS24S4R325 110 aa6.01□□□□□ -1.45
CCDC90B-219ENST00000534753 A0A087WTM6 91 aa6□□□□□ -1.45
CCDC90B-219ENST00000534753 A0A087WWC5 75 aa6□□□□□ -1.45
CCDC90B-219ENST00000534753 TMEM262E9PQX1 116 aa6□□□□□ -1.45
CCDC90B-219ENST00000534753 K7EP13 123 aa6□□□□□ -1.45
CCDC90B-219ENST00000534753 IGLV2-8P01709 118 aa6□□□□□ -1.45
CCDC90B-219ENST00000534753 RAB4BP61018 213 aa6□□□□□ -1.45
CCDC90B-219ENST00000534753 SUMO4Q6EEV6 95 aa6□□□□□ -1.45
CCDC90B-219ENST00000534753 KCNIP4Q6PIL6 250 aa6□□□□□ -1.45
CCDC90B-219ENST00000534753 DAZ4Q86SG3 579 aaKnown RBP6□□□□□ -1.45
CCDC90B-219ENST00000534753 FER1L6-AS1Q8NA97 138 aa6□□□□□ -1.45
CCDC90B-219ENST00000534753 DAZ3Q9NR90 486 aaKnown RBP6□□□□□ -1.45
CCDC90B-219ENST00000534753 TRBV20OR9-2A0A075B6H5 130 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 TRBV7-3A0A075B6L6 115 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 GAGE10A6NGK3 116 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 IBA57-AS1B1ANH7 110 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 SNAI2O43623 268 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 CXCL1P09341 107 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 OR5AL1P0C617 328 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 LINC00694P0DN24 101 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 RPS20P60866 119 aaKnown RBP5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 MAPKAPK5-AS1Q8N8E1 139 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 AP1S3Q96PC3 154 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 KRTAP9-3Q9BYQ3 159 aa5.99□□□□□ -1.45
CCDC90B-219ENST00000534753 A0A087WX48 190 aa5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 XKRY2A2RUG3 117 aa5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 LECT2O14960 151 aa5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 TAGLN2P37802 199 aaKnown RBP5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 UBE2D3P61077 147 aa5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 UBE2D2P62837 147 aa5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 LYZL1Q6UWQ5 148 aa5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 NEXN-AS1Q8NBZ9 246 aa5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 OCC1Q8TAD7 63 aa5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 EIF5A2Q9GZV4 153 aaKnown RBP5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 RNASE7Q9H1E1 156 aaKnown RBP5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 BIN3Q9NQY0 253 aa5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 HERC2O95714 4834 aa5.98□□□□□ -1.45
CCDC90B-219ENST00000534753 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
CCDC90B-219ENST00000534753 TRBV10-1A0A0K0K1A3 114 aa5.97□□□□□ -1.45
CCDC90B-219ENST00000534753 C19orf71A6NCJ1 209 aa5.97□□□□□ -1.45
CCDC90B-219ENST00000534753 CACNG7P62955 275 aa5.97□□□□□ -1.45
CCDC90B-219ENST00000534753 DEFB104AQ8WTQ1 72 aa5.97□□□□□ -1.45
CCDC90B-219ENST00000534753 DNAJC30Q96LL9 226 aa5.97□□□□□ -1.45
CCDC90B-219ENST00000534753 CHCHD5Q9BSY4 110 aa5.97□□□□□ -1.45
CCDC90B-219ENST00000534753 KLK12Q9UKR0 248 aa5.97□□□□□ -1.45
CCDC90B-219ENST00000534753 DNAH11Q96DT5 4516 aa5.97□□□□□ -1.45
CCDC90B-219ENST00000534753 DYNC1H1Q14204 4646 aaKnown RBP5.97□□□□□ -1.45
CCDC90B-219ENST00000534753 IGKV2D-24A0A075B6R9 120 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 IGLV5-52A0A0A0MRZ9 124 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 TRAV8-3A0A0A6YYJ7 113 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 K7EN84 100 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 CDK2AP2O75956 126 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 IGLC6P0CF74 106 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 NTF3P20783 257 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 TWIST1Q15672 202 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 NIT1Q86X76 327 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 UBE2WQ96B02 151 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 SMIM12Q96EX1 92 aa5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 RPP21Q9H633 154 aaKnown RBP5.96□□□□□ -1.46
CCDC90B-219ENST00000534753 F2Z2F3 143 aa5.95□□□□□ -1.46
CCDC90B-219ENST00000534753 GATCO43716 136 aaKnown RBP5.95□□□□□ -1.46
CCDC90B-219ENST00000534753 SLPIP03973 132 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms