RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 HLA-DRB4X5D2U9 266 aa4.5□□□□□ -1.69
CMTM1-220ENST00000534143 TGP01266 2768 aa4.5□□□□□ -1.69
CMTM1-220ENST00000534143 DNAH3Q8TD57 4116 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 VWFP04275 2813 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 C19orf71A6NCJ1 209 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 FAM231BA6NCW3 169 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 A8MWL6 223 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 KLLNB2CW77 178 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 F2Z2F3 143 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 H3BUT2 72 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 CRXO43186 299 aaPredicted RBP4.49□□□□□ -1.69
CMTM1-220ENST00000534143 AZU1P20160 251 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 ZNF80P51504 273 aaPredicted RBP4.49□□□□□ -1.69
CMTM1-220ENST00000534143 LYRM7Q5U5X0 104 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 LINC00322Q6ZN03 302 aaPredicted RBP4.49□□□□□ -1.69
CMTM1-220ENST00000534143 NEGR1Q7Z3B1 354 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 ERASQ7Z444 233 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 TRPT1Q86TN4 253 aaKnown RBP4.49□□□□□ -1.69
CMTM1-220ENST00000534143 NHLRC2Q8NBF2 726 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 ZC2HC1AQ96GY0 325 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 WFDC10AQ9H1F0 79 aa4.49□□□□□ -1.69
CMTM1-220ENST00000534143 A0A1B0GW15 77 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 A0A1W2PPM0 123 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 F8W1H4 67 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 IGKV3-20P01619 116 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 TCTAP57738 103 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 ODF1Q14990 250 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 KPRPQ5T749 579 aaPredicted RBP4.48□□□□□ -1.69
CMTM1-220ENST00000534143 PRR9Q5T870 116 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 UFSP1Q6NVU6 142 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 Q6ZVH6 145 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 GTSCR1Q86UQ5 136 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 STHQ8IWL8 128 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 NDFIP1Q9BT67 221 aa4.48□□□□□ -1.69
CMTM1-220ENST00000534143 TRAV8-6A0A0B4J262 113 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 IGHV1-24A0A0C4DH33 117 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 hDV102S1A0JD36 115 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 FABP5P3A8MUU1 101 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 H0Y8G0 127 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 SH2D1AO60880 128 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 GIG44P09565 113 aaPredicted RBP4.47□□□□□ -1.69
CMTM1-220ENST00000534143 LEPP41159 167 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 CAMPP49913 170 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 SMAGPQ0VAQ4 97 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 RIGQ13278 110 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 SPINK13Q1W4C9 94 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 Q6AWC8 147 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 Q6ZQT7 251 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 GFRA4Q9GZZ7 299 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 RNASE7Q9H1E1 156 aaKnown RBP4.47□□□□□ -1.69
CMTM1-220ENST00000534143 MRPL16Q9NX20 251 aaKnown RBP4.47□□□□□ -1.69
CMTM1-220ENST00000534143 CYSLTR1Q9Y271 337 aa4.47□□□□□ -1.69
CMTM1-220ENST00000534143 NOTCH3Q9UM47 2321 aa4.46□□□□□ -1.69
CMTM1-220ENST00000534143 TRAV21A0A0B4J279 112 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 IGKV3D-20A0A0C4DH25 116 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 A8MZ25 164 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 J3KRW8 73 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 P01737 135 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 RBMY1A1P0DJD3 496 aaKnown RBP4.46□□□□□ -1.7
CMTM1-220ENST00000534143 RBMY1CP0DJD4 496 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 RPL35AP18077 110 aaKnown RBP4.46□□□□□ -1.7
CMTM1-220ENST00000534143 MALP21145 153 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 RNASE4P34096 147 aaKnown RBP4.46□□□□□ -1.7
CMTM1-220ENST00000534143 FXYD7P58549 80 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 SLAQ13239 276 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 RBMY1FQ15415 496 aaKnown RBP4.46□□□□□ -1.7
CMTM1-220ENST00000534143 MORN3Q6PF18 240 aaPredicted RBP4.46□□□□□ -1.7
CMTM1-220ENST00000534143 SPATA12Q7Z6I5 190 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 PRSS3P2Q8NHM4 247 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 GTSF1LQ9H1H1 148 aa4.46□□□□□ -1.7
CMTM1-220ENST00000534143 RPP21Q9H633 154 aaKnown RBP4.46□□□□□ -1.7
CMTM1-220ENST00000534143 GEMIN7Q9H840 131 aaKnown RBP4.46□□□□□ -1.7
CMTM1-220ENST00000534143 TRAV12-2A0A075B6T6 113 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 TRAV12-3A0A0B4J271 114 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 TMEM189A5PLL7 270 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 HIGD1CA8MV81 97 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 CA1P00915 261 aaPredicted RBP4.45□□□□□ -1.7
CMTM1-220ENST00000534143 IGHV4-30-4P0DP06 118 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 LGALS9BQ3B8N2 356 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 LINC01545Q5VT33 79 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 LGALS9CQ6DKI2 356 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 C1orf158Q8N1D5 194 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 CSNK1G2-AS1Q8NCQ2 148 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 NUP35Q8NFH5 326 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 OR11H2Q8NH07 326 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 TIMM8BQ9Y5J9 83 aaPredicted RBP4.45□□□□□ -1.7
CMTM1-220ENST00000534143 TNFRSF18Q9Y5U5 241 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 NOTCH1P46531 2555 aa4.45□□□□□ -1.7
CMTM1-220ENST00000534143 ORM1P02763 201 aa4.44□□□□□ -1.7
CMTM1-220ENST00000534143 FOXA3P55318 350 aaPredicted RBP4.44□□□□□ -1.7
CMTM1-220ENST00000534143 TAL2Q16559 108 aa4.44□□□□□ -1.7
CMTM1-220ENST00000534143 ANXA2RQ3ZCQ2 193 aa4.44□□□□□ -1.7
CMTM1-220ENST00000534143 KIR2DL5BQ8NHK3 375 aa4.44□□□□□ -1.7
CMTM1-220ENST00000534143 RAB37Q96AX2 223 aa4.44□□□□□ -1.7
CMTM1-220ENST00000534143 LINC00467Q9BRT7 94 aa4.44□□□□□ -1.7
CMTM1-220ENST00000534143 C1QTNF4Q9BXJ3 329 aa4.44□□□□□ -1.7
CMTM1-220ENST00000534143 XCL2Q9UBD3 114 aa4.44□□□□□ -1.7
CMTM1-220ENST00000534143 DNAH9Q9NYC9 4486 aa4.44□□□□□ -1.7
CMTM1-220ENST00000534143 IGHV1OR15-1A0A075B7D0 117 aa4.43□□□□□ -1.7
CMTM1-220ENST00000534143 TMEM262E9PQX1 116 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms