RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 A0A087WX48 190 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 TRAV8-3A0A0A6YYJ7 113 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 TRBV10-1A0A0K0K1A3 114 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 RBFOX3A6NFN3 312 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 S100A8P05109 93 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 S100A6P06703 90 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 SMIM17P0DL12 118 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 RAB4BP61018 213 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 UBE2D3P61077 147 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 UBE2D2P62837 147 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 HAMPP81172 84 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 KCNIP4Q6PIL6 250 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 SVBPQ8N300 66 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 Q8N814 137 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 OR2D3Q8NGH3 330 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 KLK12Q9UKR0 248 aa6.96□□□□□ -1.3
CAPN1-225ENST00000533704 EPM2AB3EWF7 344 aa6.95□□□□□ -1.3
CAPN1-225ENST00000533704 TMEM262E9PQX1 116 aa6.95□□□□□ -1.3
CAPN1-225ENST00000533704 SNAI2O43623 268 aa6.95□□□□□ -1.3
CAPN1-225ENST00000533704 MGPP08493 103 aa6.95□□□□□ -1.3
CAPN1-225ENST00000533704 OR5AL1P0C617 328 aa6.95□□□□□ -1.3
CAPN1-225ENST00000533704 GNG4P50150 75 aa6.95□□□□□ -1.3
CAPN1-225ENST00000533704 MEF2BQ02080 365 aaPredicted RBP6.95□□□□□ -1.3
CAPN1-225ENST00000533704 WFDC2Q14508 124 aa6.95□□□□□ -1.3
CAPN1-225ENST00000533704 NIT1Q86X76 327 aa6.95□□□□□ -1.3
CAPN1-225ENST00000533704 NEXN-AS1Q8NBZ9 246 aa6.95□□□□□ -1.3
CAPN1-225ENST00000533704 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
CAPN1-225ENST00000533704 PDE6DO43924 150 aa6.94□□□□□ -1.3
CAPN1-225ENST00000533704 IGLV2-8P01709 118 aa6.94□□□□□ -1.3
CAPN1-225ENST00000533704 BCL2P10415 239 aa6.94□□□□□ -1.3
CAPN1-225ENST00000533704 XGP55808 180 aa6.94□□□□□ -1.3
CAPN1-225ENST00000533704 FER1L6-AS1Q8NA97 138 aa6.94□□□□□ -1.3
CAPN1-225ENST00000533704 NTN5Q8WTR8 489 aaPredicted RBP6.94□□□□□ -1.3
CAPN1-225ENST00000533704 UBE2WQ96B02 151 aa6.94□□□□□ -1.3
CAPN1-225ENST00000533704 RMI2Q96E14 147 aa6.94□□□□□ -1.3
CAPN1-225ENST00000533704 DNAJC30Q96LL9 226 aa6.94□□□□□ -1.3
CAPN1-225ENST00000533704 AP1S3Q96PC3 154 aa6.94□□□□□ -1.3
CAPN1-225ENST00000533704 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
CAPN1-225ENST00000533704 ABCA13Q86UQ4 5058 aa6.93□□□□□ -1.3
CAPN1-225ENST00000533704 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.93□□□□□ -1.3
CAPN1-225ENST00000533704 GATCO43716 136 aaKnown RBP6.93□□□□□ -1.3
CAPN1-225ENST00000533704 SNAPINO95295 136 aa6.93□□□□□ -1.3
CAPN1-225ENST00000533704 P01737 135 aa6.93□□□□□ -1.3
CAPN1-225ENST00000533704 SMR3BP02814 79 aaPredicted RBP6.93□□□□□ -1.3
CAPN1-225ENST00000533704 RPS20P60866 119 aaKnown RBP6.93□□□□□ -1.3
CAPN1-225ENST00000533704 RAB5BP61020 215 aa6.93□□□□□ -1.3
CAPN1-225ENST00000533704 FAM74A3Q4VXF1 159 aa6.93□□□□□ -1.3
CAPN1-225ENST00000533704 OR10G8Q8NGN5 311 aa6.93□□□□□ -1.3
CAPN1-225ENST00000533704 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
CAPN1-225ENST00000533704 VAX2Q9UIW0 290 aa6.93□□□□□ -1.3
CAPN1-225ENST00000533704 TRBV6-8A0A0A6YYG3 113 aa6.92□□□□□ -1.3
CAPN1-225ENST00000533704 XKRY2A2RUG3 117 aa6.92□□□□□ -1.3
CAPN1-225ENST00000533704 ELOBQ15370 118 aa6.92□□□□□ -1.3
CAPN1-225ENST00000533704 C15orf54Q8N8G6 183 aa6.92□□□□□ -1.3
CAPN1-225ENST00000533704 FRZBQ92765 325 aa6.92□□□□□ -1.3
CAPN1-225ENST00000533704 CHCHD5Q9BSY4 110 aa6.92□□□□□ -1.3
CAPN1-225ENST00000533704 TRBV20OR9-2A0A075B6H5 130 aa6.91□□□□□ -1.3
CAPN1-225ENST00000533704 C19orf71A6NCJ1 209 aa6.91□□□□□ -1.3
CAPN1-225ENST00000533704 CRPP02741 224 aa6.91□□□□□ -1.3
CAPN1-225ENST00000533704 IGLC6P0CF74 106 aa6.91□□□□□ -1.3
CAPN1-225ENST00000533704 CACNG7P62955 275 aa6.91□□□□□ -1.3
CAPN1-225ENST00000533704 Q5VSD8 79 aa6.91□□□□□ -1.3
CAPN1-225ENST00000533704 ATRAIDQ6UW56 229 aa6.91□□□□□ -1.3
CAPN1-225ENST00000533704 CHCHD7Q9BUK0 85 aa6.91□□□□□ -1.3
CAPN1-225ENST00000533704 CARHSP1Q9Y2V2 147 aaKnown RBP6.91□□□□□ -1.3
CAPN1-225ENST00000533704 COX11Q9Y6N1 276 aa6.91□□□□□ -1.3
CAPN1-225ENST00000533704 KIF25-AS1Q9Y6Z4 181 aa6.91□□□□□ -1.3
CAPN1-225ENST00000533704 ANGP03950 147 aaKnown RBP6.9□□□□□ -1.3
CAPN1-225ENST00000533704 S100PP25815 95 aa6.9□□□□□ -1.3
CAPN1-225ENST00000533704 GAGE6Q13070 117 aa6.9□□□□□ -1.3
CAPN1-225ENST00000533704 MPV17L2Q567V2 206 aa6.9□□□□□ -1.3
CAPN1-225ENST00000533704 SUMO4Q6EEV6 95 aa6.9□□□□□ -1.3
CAPN1-225ENST00000533704 LYZL1Q6UWQ5 148 aa6.9□□□□□ -1.3
CAPN1-225ENST00000533704 SMIM12Q96EX1 92 aa6.9□□□□□ -1.3
CAPN1-225ENST00000533704 TMEM70Q9BUB7 260 aa6.9□□□□□ -1.3
CAPN1-225ENST00000533704 TMEM218A2RU14 115 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 F2Z2F3 143 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 H7C1H1 209 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 TAGLN2P37802 199 aaKnown RBP6.89□□□□□ -1.31
CAPN1-225ENST00000533704 CEBPGP53567 150 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 Q0VG73 95 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 LINC01620Q4KN68 170 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 CLPSL2Q6UWE3 100 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 Q8N976 141 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 NUDT10Q8NFP7 164 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 NUDT11Q96G61 164 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 C1orf43Q9BWL3 253 aa6.89□□□□□ -1.31
CAPN1-225ENST00000533704 RNASE7Q9H1E1 156 aaKnown RBP6.89□□□□□ -1.31
CAPN1-225ENST00000533704 TRBV25-1A0A075B6N4 114 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 C1orf196B1AJZ1 125 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 M0QY20 66 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 TRGC1P0CF51 173 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 INAFM2P0DMQ5 153 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 NTF3P20783 257 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 PKIAP61925 76 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 BLOC1S1P78537 153 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 PEA15Q15121 130 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 TMEM97Q5BJF2 176 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 NTM-AS1Q6ZSK4 140 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 OCC1Q8TAD7 63 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms