RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 A0A087WWL8 130 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 TRBV27A0A0K0K1C4 114 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 K7EMT4 169 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 SRD5A1P18405 259 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 APCP25054 2843 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 SDHAF1A6NFY7 115 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 NDUFA11Q86Y39 141 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 DCANP1Q8TF63 244 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 PSMB2P49721 201 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 TSPEAR-AS2P59090 65 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 FOXI1Q12951 378 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 ZNF876PQ49A33 203 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 LYRM7Q5U5X0 104 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 ZNF702PQ9H963 129 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 CHD6Q8TD26 2715 aa13.35□□□□□ -0.27
UBXN1-213ENST00000532904 CSMD2Q7Z408 3487 aa13.34□□□□□ -0.27
UBXN1-213ENST00000532904 LOC107984156A0A0G2JMH3 177 aa13.34□□□□□ -0.27
UBXN1-213ENST00000532904 F5H697 171 aa13.34□□□□□ -0.27
UBXN1-213ENST00000532904 CIDEAO60543 219 aa13.34□□□□□ -0.27
UBXN1-213ENST00000532904 ARL17AQ8IVW1 177 aa13.34□□□□□ -0.27
UBXN1-213ENST00000532904 SLC25A29Q8N8R3 303 aa13.34□□□□□ -0.27
UBXN1-213ENST00000532904 ZNRF2Q8NHG8 242 aa13.34□□□□□ -0.27
UBXN1-213ENST00000532904 TRAV12-3A0A0B4J271 114 aa13.33□□□□□ -0.27
UBXN1-213ENST00000532904 IGHV3-30P01768 117 aa13.33□□□□□ -0.27
UBXN1-213ENST00000532904 ELANEP08246 267 aa13.33□□□□□ -0.27
UBXN1-213ENST00000532904 IGHV3-30-5P0DP03 117 aa13.33□□□□□ -0.27
UBXN1-213ENST00000532904 EDN2P20800 178 aa13.33□□□□□ -0.27
UBXN1-213ENST00000532904 DEFB104AQ8WTQ1 72 aa13.33□□□□□ -0.27
UBXN1-213ENST00000532904 C9orf85Q96MD7 179 aa13.33□□□□□ -0.27
UBXN1-213ENST00000532904 TMEM170BQ5T4T1 132 aa13.33□□□□□ -0.28
UBXN1-213ENST00000532904 AMELXQ99217 191 aa13.33□□□□□ -0.28
UBXN1-213ENST00000532904 ZANQ9Y493 2812 aa13.33□□□□□ -0.28
UBXN1-213ENST00000532904 Q8N2B8 174 aa13.32□□□□□ -0.28
UBXN1-213ENST00000532904 RNF152Q8N8N0 203 aa13.32□□□□□ -0.28
UBXN1-213ENST00000532904 ODF3Q96PU9 254 aa13.32□□□□□ -0.28
UBXN1-213ENST00000532904 IGHV3-16A0A0C4DH30 117 aa13.32□□□□□ -0.28
UBXN1-213ENST00000532904 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
UBXN1-213ENST00000532904 WFDC12Q8WWY7 111 aa13.32□□□□□ -0.28
UBXN1-213ENST00000532904 CFC1BP0CG36 223 aa13.31□□□□□ -0.28
UBXN1-213ENST00000532904 CFC1P0CG37 223 aa13.31□□□□□ -0.28
UBXN1-213ENST00000532904 TMEM86BQ8N661 226 aa13.31□□□□□ -0.28
UBXN1-213ENST00000532904 WFDC11Q8NEX6 87 aa13.31□□□□□ -0.28
UBXN1-213ENST00000532904 NSUN5P1Q3KNT7 163 aa13.3□□□□□ -0.28
UBXN1-213ENST00000532904 SFTA2Q6UW10 78 aa13.3□□□□□ -0.28
UBXN1-213ENST00000532904 TRBV20-1A0A075B6N2 111 aa13.3□□□□□ -0.28
UBXN1-213ENST00000532904 J3QQQ9 107 aa13.3□□□□□ -0.28
UBXN1-213ENST00000532904 M0QY20 66 aa13.3□□□□□ -0.28
UBXN1-213ENST00000532904 RHOHQ15669 191 aa13.3□□□□□ -0.28
UBXN1-213ENST00000532904 SYT8Q8NBV8 401 aa13.3□□□□□ -0.28
UBXN1-213ENST00000532904 FAM74A4Q5TZK3 123 aa13.29□□□□□ -0.28
UBXN1-213ENST00000532904 TCL1BO95988 128 aa13.28□□□□□ -0.28
UBXN1-213ENST00000532904 LGALS3P17931 250 aaKnown RBP13.28□□□□□ -0.28
UBXN1-213ENST00000532904 C10orf99Q6UWK7 81 aa13.28□□□□□ -0.28
UBXN1-213ENST00000532904 C10orf126Q8N4M7 172 aa13.28□□□□□ -0.28
UBXN1-213ENST00000532904 ZNF256Q9Y2P7 627 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-213ENST00000532904 TENM4Q6N022 2769 aa13.28□□□□□ -0.28
UBXN1-213ENST00000532904 SBSPONQ8IVN8 264 aa13.28□□□□□ -0.28
UBXN1-213ENST00000532904 ZNF418Q8TF45 676 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-213ENST00000532904 UBE2E2Q96LR5 201 aa13.28□□□□□ -0.28
UBXN1-213ENST00000532904 MDFICQ9P1T7 246 aa13.28□□□□□ -0.28
UBXN1-213ENST00000532904 ZNF56Q15929 161 aa13.27□□□□□ -0.28
UBXN1-213ENST00000532904 HIST2H2BCQ6DN03 193 aa13.27□□□□□ -0.28
UBXN1-213ENST00000532904 CDIP1Q9H305 208 aa13.27□□□□□ -0.28
UBXN1-213ENST00000532904 TEX15Q9BXT5 2789 aa13.27□□□□□ -0.29
UBXN1-213ENST00000532904 A0A0J9YX75 114 aa13.27□□□□□ -0.29
UBXN1-213ENST00000532904 TMEM223A0PJW6 202 aa13.27□□□□□ -0.29
UBXN1-213ENST00000532904 LEPROTO15243 131 aa13.27□□□□□ -0.29
UBXN1-213ENST00000532904 TRPT1Q86TN4 253 aaKnown RBP13.27□□□□□ -0.29
UBXN1-213ENST00000532904 PRO1854Q9UHT4 67 aa13.27□□□□□ -0.29
UBXN1-213ENST00000532904 A0A1B0GV72 72 aa13.26□□□□□ -0.29
UBXN1-213ENST00000532904 ZNF688P0C7X2 276 aa13.26□□□□□ -0.29
UBXN1-213ENST00000532904 TEN1Q86WV5 123 aa13.26□□□□□ -0.29
UBXN1-213ENST00000532904 PPDPFLQ8WWR9 84 aa13.26□□□□□ -0.29
UBXN1-213ENST00000532904 P0DMU3 169 aa13.25□□□□□ -0.29
UBXN1-213ENST00000532904 FAM231AP0DMU4 169 aa13.25□□□□□ -0.29
UBXN1-213ENST00000532904 FAM231CP0DMU5 169 aa13.25□□□□□ -0.29
UBXN1-213ENST00000532904 TCTEX1D4Q5JR98 221 aa13.25□□□□□ -0.29
UBXN1-213ENST00000532904 Q8N1Y9 231 aa13.25□□□□□ -0.29
UBXN1-213ENST00000532904 CARD19Q96LW7 228 aa13.25□□□□□ -0.29
UBXN1-213ENST00000532904 ITPR3Q14573 2671 aa13.25□□□□□ -0.29
UBXN1-213ENST00000532904 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
UBXN1-213ENST00000532904 IGHV1OR15-1A0A075B7D0 117 aa13.25□□□□□ -0.29
UBXN1-213ENST00000532904 PTH2Q96A98 100 aa13.25□□□□□ -0.29
UBXN1-213ENST00000532904 OPRPNQ99935 248 aaPredicted RBP13.25□□□□□ -0.29
UBXN1-213ENST00000532904 C20orf203Q8NBC4 194 aa13.24□□□□□ -0.29
UBXN1-213ENST00000532904 SNRPD3P62318 126 aaKnown RBP13.24□□□□□ -0.29
UBXN1-213ENST00000532904 K7EQG2 157 aa13.23□□□□□ -0.29
UBXN1-213ENST00000532904 MXRA5Q9NR99 2828 aa13.23□□□□□ -0.29
UBXN1-213ENST00000532904 A8MWV9 139 aa13.22□□□□□ -0.29
UBXN1-213ENST00000532904 IGKV3-20P01619 116 aa13.22□□□□□ -0.29
UBXN1-213ENST00000532904 ZNF22P17026 224 aaPredicted RBP13.22□□□□□ -0.29
UBXN1-213ENST00000532904 FHL3Q13643 280 aa13.22□□□□□ -0.29
UBXN1-213ENST00000532904 VCX2Q9H322 139 aa13.22□□□□□ -0.29
UBXN1-213ENST00000532904 A4D1N5 150 aa13.22□□□□□ -0.29
UBXN1-213ENST00000532904 I3L3M4 83 aa13.22□□□□□ -0.29
UBXN1-213ENST00000532904 RHODO00212 210 aa13.22□□□□□ -0.29
UBXN1-213ENST00000532904 SCGB1C2P0DMR2 95 aa13.21□□□□□ -0.29
UBXN1-213ENST00000532904 CRYBA4P53673 196 aa13.21□□□□□ -0.29
UBXN1-213ENST00000532904 EIF4EBP3O60516 100 aaPredicted RBP13.2□□□□□ -0.3
UBXN1-213ENST00000532904 IGHV3-33P01772 117 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms