RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 LINC01545Q5VT33 79 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 WFDC11Q8NEX6 87 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 UPK3BQ9BT76 320 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 PIEZO1Q92508 2521 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 PCNX3Q9H6A9 2034 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 H3BMG7 143 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 TAX1BP3O14907 124 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 IGLC2P0DOY2 106 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 IGLC3P0DOY3 106 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 NPYP01303 97 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 C11orf45Q8TAV5 145 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 SMIM27A0A1W2PRY6 76 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 RBAKDNA6NC62 111 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 K7EMI3 77 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 SPRY2O43597 315 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 C11orf52Q96A22 123 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 IGKV2-24A0A0C4DH68 120 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 K7ERJ3 54 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 C18orf32Q8TCD1 76 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 USP17L23D6RBM5 183 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 DEFB135Q30KP9 77 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 NUP210LQ5VU65 1888 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 A6NDX4 124 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 IGHV4-31P0DP07 118 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 SPAG11BQ08648 103 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 C20orf144Q9BQM9 153 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 C2orf70A6NJV1 201 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 COX8AP10176 69 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 HILS1P60008 231 aa6.73□□□□□ -1.33
CTNND1-232ENST00000532649 NCOR2Q9Y618 2525 aa6.72□□□□□ -1.33
CTNND1-232ENST00000532649 C16orf54Q6UWD8 224 aa6.72□□□□□ -1.33
CTNND1-232ENST00000532649 TMEM61Q8N0U2 210 aa6.72□□□□□ -1.33
CTNND1-232ENST00000532649 V9GYY9 64 aa6.72□□□□□ -1.33
CTNND1-232ENST00000532649 CSPG4Q6UVK1 2322 aa6.72□□□□□ -1.33
CTNND1-232ENST00000532649 C4orf3Q8WVX3 66 aa6.72□□□□□ -1.33
CTNND1-232ENST00000532649 TNFRSF13BO14836 293 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-232ENST00000532649 IGLV2-14P01704 120 aa6.72□□□□□ -1.33
CTNND1-232ENST00000532649 IGKV3D-7A0A0C4DH55 119 aa6.72□□□□□ -1.33
CTNND1-232ENST00000532649 COX7BP24311 80 aa6.72□□□□□ -1.33
CTNND1-232ENST00000532649 E7EUB6 86 aa6.71□□□□□ -1.33
CTNND1-232ENST00000532649 LENEPQ9Y5L5 61 aa6.71□□□□□ -1.33
CTNND1-232ENST00000532649 DSCAMO60469 2012 aa6.71□□□□□ -1.33
CTNND1-232ENST00000532649 A0A087WZ39 114 aa6.71□□□□□ -1.33
CTNND1-232ENST00000532649 DEFB4AO15263 64 aa6.71□□□□□ -1.33
CTNND1-232ENST00000532649 KLK12Q9UKR0 248 aa6.71□□□□□ -1.33
CTNND1-232ENST00000532649 TRBV10-2A0A0K0K1G8 114 aa6.71□□□□□ -1.34
CTNND1-232ENST00000532649 JMJD7-PLA2G4BH0Y9G9 81 aa6.71□□□□□ -1.34
CTNND1-232ENST00000532649 CHD3Q12873 2000 aaKnown RBP6.71□□□□□ -1.34
CTNND1-232ENST00000532649 SIVA1O15304 175 aa6.71□□□□□ -1.34
CTNND1-232ENST00000532649 PATE2Q6UY27 113 aa6.71□□□□□ -1.34
CTNND1-232ENST00000532649 FAM19A1Q7Z5A9 133 aa6.71□□□□□ -1.34
CTNND1-232ENST00000532649 TMEM89A2RUT3 159 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 C10orf142B7Z368 130 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 C12orf74Q32Q52 190 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 INSL3P51460 131 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 FAM236AA0A1B0GUQ0 79 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 FAM236BA0A1B0GV22 79 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 INAFM1C9JVW0 142 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 K7EN84 100 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 UBE2D3P61077 147 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 ODF3BA8MYP8 253 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 FAM110AQ9BQ89 295 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 HIGD2AQ9BW72 106 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 PRR14LQ5THK1 2151 aa6.7□□□□□ -1.34
CTNND1-232ENST00000532649 IGF2RP11717 2491 aa6.69□□□□□ -1.34
CTNND1-232ENST00000532649 WI2-2373I1.2A0A1W2PRP0 233 aa6.69□□□□□ -1.34
CTNND1-232ENST00000532649 K7EMT4 169 aa6.69□□□□□ -1.34
CTNND1-232ENST00000532649 SERP1Q9Y6X1 66 aa6.69□□□□□ -1.34
CTNND1-232ENST00000532649 A0A0U1RQV1 116 aa6.69□□□□□ -1.34
CTNND1-232ENST00000532649 MPLKIPQ8TAP9 179 aa6.69□□□□□ -1.34
CTNND1-232ENST00000532649 TRBV7-3A0A075B6L6 115 aa6.68□□□□□ -1.34
CTNND1-232ENST00000532649 TMEM256-PLSCR3K7ERE1 68 aa6.68□□□□□ -1.34
CTNND1-232ENST00000532649 C11orf71Q6IPW1 123 aa6.68□□□□□ -1.34
CTNND1-232ENST00000532649 Q6ZVH6 145 aa6.68□□□□□ -1.34
CTNND1-232ENST00000532649 DKK2Q9UBU2 259 aa6.68□□□□□ -1.34
CTNND1-232ENST00000532649 CRYGDP07320 174 aa6.68□□□□□ -1.34
CTNND1-232ENST00000532649 Q6YL49 198 aa6.68□□□□□ -1.34
CTNND1-232ENST00000532649 UNQ9165/PRO28630Q6UXU0 137 aa6.68□□□□□ -1.34
CTNND1-232ENST00000532649 C3orf22Q8N5N4 141 aa6.68□□□□□ -1.34
CTNND1-232ENST00000532649 ZNF706Q9Y5V0 76 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-232ENST00000532649 LINC01548A6NM66 108 aa6.67□□□□□ -1.34
CTNND1-232ENST00000532649 FAM240AA0A1B0GVK7 77 aa6.67□□□□□ -1.34
CTNND1-232ENST00000532649 PDE6GP18545 87 aa6.67□□□□□ -1.34
CTNND1-232ENST00000532649 PRAC2D3DTV9 90 aa6.67□□□□□ -1.34
CTNND1-232ENST00000532649 NDUFA11Q86Y39 141 aa6.67□□□□□ -1.34
CTNND1-232ENST00000532649 PCP2Q8IVA1 136 aa6.67□□□□□ -1.34
CTNND1-232ENST00000532649 LINC00574Q9H8X3 128 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 ATRXP46100 2492 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 LRP4O75096 1905 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 GOLGB1Q14789 3259 aaKnown RBP6.66□□□□□ -1.34
CTNND1-232ENST00000532649 A0A096LNI7 61 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 DEFB1P60022 68 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 LYPD6BQ8NI32 183 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 LECT2O14960 151 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 CCL25O15444 150 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 FSTL3O95633 263 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 PLA2G2AP14555 144 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 RPL39LQ96EH5 51 aaKnown RBP6.66□□□□□ -1.34
CTNND1-232ENST00000532649 FAM167A-AS1Q96KT0 104 aa6.66□□□□□ -1.34
CTNND1-232ENST00000532649 ARHGAP21Q5T5U3 1957 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms