RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 LINC00482Q8N8I6 264 aa8.58□□□□□ -1.04
PTPRK-221ENST00000532331 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
PTPRK-221ENST00000532331 C12orf74Q32Q52 190 aa8.58□□□□□ -1.04
PTPRK-221ENST00000532331 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
PTPRK-221ENST00000532331 NDUFA7O95182 113 aa8.58□□□□□ -1.04
PTPRK-221ENST00000532331 DEFB131BA0A096LNP1 70 aa8.58□□□□□ -1.04
PTPRK-221ENST00000532331 TRAV4A0A0B4J268 109 aa8.58□□□□□ -1.04
PTPRK-221ENST00000532331 K7ERJ3 54 aa8.58□□□□□ -1.04
PTPRK-221ENST00000532331 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
PTPRK-221ENST00000532331 DEFB1P60022 68 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 C10orf99Q6UWK7 81 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 ZNF295-AS1Q8N0V1 137 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 TRBV6-1A0A0K0K1D8 114 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 CFC1BP0CG36 223 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 CFC1P0CG37 223 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 MAJINQ3KP22 176 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 ETDBQ3ZM63 59 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 CHD3Q12873 2000 aaKnown RBP8.57□□□□□ -1.04
PTPRK-221ENST00000532331 PROP1O75360 226 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 TIRAPP58753 221 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 GTSF1Q8WW33 167 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 LRP4O75096 1905 aa8.57□□□□□ -1.04
PTPRK-221ENST00000532331 IFITM1P13164 125 aa8.56□□□□□ -1.04
PTPRK-221ENST00000532331 A0A0J9YXV3 536 aa8.56□□□□□ -1.04
PTPRK-221ENST00000532331 LYRM9A8MSI8 78 aa8.56□□□□□ -1.04
PTPRK-221ENST00000532331 LINC01545Q5VT33 79 aa8.56□□□□□ -1.04
PTPRK-221ENST00000532331 PCP2Q8IVA1 136 aa8.56□□□□□ -1.04
PTPRK-221ENST00000532331 HIST2H2BDQ6DRA6 164 aa8.56□□□□□ -1.04
PTPRK-221ENST00000532331 CTRLP40313 264 aa8.55□□□□□ -1.04
PTPRK-221ENST00000532331 COA6Q5JTJ3 125 aaKnown RBP8.55□□□□□ -1.04
PTPRK-221ENST00000532331 FAM222AQ5U5X8 452 aa8.55□□□□□ -1.04
PTPRK-221ENST00000532331 ETDCA0A1B0GVM5 59 aa8.55□□□□□ -1.04
PTPRK-221ENST00000532331 COX7B2Q8TF08 81 aa8.55□□□□□ -1.04
PTPRK-221ENST00000532331 MIFP14174 115 aa8.55□□□□□ -1.04
PTPRK-221ENST00000532331 VSIG2Q96IQ7 327 aa8.55□□□□□ -1.04
PTPRK-221ENST00000532331 PIEZO2Q9H5I5 2752 aa8.55□□□□□ -1.04
PTPRK-221ENST00000532331 K7EP13 123 aa8.54□□□□□ -1.04
PTPRK-221ENST00000532331 H3BMG7 143 aa8.54□□□□□ -1.04
PTPRK-221ENST00000532331 PSMB8P28062 276 aa8.54□□□□□ -1.04
PTPRK-221ENST00000532331 ORMDL1Q9P0S3 153 aa8.54□□□□□ -1.04
PTPRK-221ENST00000532331 KLK12Q9UKR0 248 aa8.54□□□□□ -1.04
PTPRK-221ENST00000532331 TRAV26-1A0A087WT03 109 aa8.54□□□□□ -1.04
PTPRK-221ENST00000532331 TINCRA0A1B0GVN0 87 aa8.54□□□□□ -1.04
PTPRK-221ENST00000532331 K7EQG2 157 aa8.54□□□□□ -1.04
PTPRK-221ENST00000532331 P0C879 139 aa8.54□□□□□ -1.04
PTPRK-221ENST00000532331 C14orf177Q52M58 125 aa8.54□□□□□ -1.04
PTPRK-221ENST00000532331 AVPP01185 164 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 DEFB105AQ8NG35 78 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 SPANXDQ9BXN6 97 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 IGKV1D-37A0A075B6S9 117 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 PRB2P02812 416 aaPredicted RBP8.53□□□□□ -1.04
PTPRK-221ENST00000532331 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
PTPRK-221ENST00000532331 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 NAV3Q8IVL0 2385 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 Q6ZVH6 145 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 TOMM6Q96B49 74 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 C11orf1Q9H5F2 150 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 ARHGAP21Q5T5U3 1957 aa8.53□□□□□ -1.04
PTPRK-221ENST00000532331 OXLD1Q5BKU9 147 aa8.52□□□□□ -1.04
PTPRK-221ENST00000532331 TRAV10A0A0B4J240 114 aa8.52□□□□□ -1.05
PTPRK-221ENST00000532331 NDUFA1O15239 70 aa8.52□□□□□ -1.05
PTPRK-221ENST00000532331 TIMM17AQ99595 171 aa8.52□□□□□ -1.05
PTPRK-221ENST00000532331 BAALC-AS2P0C853 105 aa8.52□□□□□ -1.05
PTPRK-221ENST00000532331 MDFICQ9P1T7 246 aa8.52□□□□□ -1.05
PTPRK-221ENST00000532331 CRYGBP07316 175 aa8.52□□□□□ -1.05
PTPRK-221ENST00000532331 LINC00173Q6ZV60 143 aa8.52□□□□□ -1.05
PTPRK-221ENST00000532331 hADV29S1A0JD25 119 aa8.51□□□□□ -1.05
PTPRK-221ENST00000532331 BAALCQ8WXS3 180 aa8.51□□□□□ -1.05
PTPRK-221ENST00000532331 H0YGX0 51 aa8.5□□□□□ -1.05
PTPRK-221ENST00000532331 C9orf153Q5TBE3 101 aa8.5□□□□□ -1.05
PTPRK-221ENST00000532331 NTN5Q8WTR8 489 aaPredicted RBP8.5□□□□□ -1.05
PTPRK-221ENST00000532331 C19orf71A6NCJ1 209 aa8.5□□□□□ -1.05
PTPRK-221ENST00000532331 CXCL5P42830 114 aa8.5□□□□□ -1.05
PTPRK-221ENST00000532331 MUSTN1Q8IVN3 82 aa8.5□□□□□ -1.05
PTPRK-221ENST00000532331 IGHV4-4A0A075B6R2 117 aa8.5□□□□□ -1.05
PTPRK-221ENST00000532331 TRBV10-1A0A0K0K1A3 114 aa8.5□□□□□ -1.05
PTPRK-221ENST00000532331 C1orf229Q6ZS94 237 aaPredicted RBP8.5□□□□□ -1.05
PTPRK-221ENST00000532331 ODF3Q96PU9 254 aa8.5□□□□□ -1.05
PTPRK-221ENST00000532331 NUPR1O60356 82 aa8.5□□□□□ -1.05
PTPRK-221ENST00000532331 ANKRD39Q53RE8 183 aa8.5□□□□□ -1.05
PTPRK-221ENST00000532331 NCOA6Q14686 2063 aaPredicted RBP8.49□□□□□ -1.05
PTPRK-221ENST00000532331 A0A1W2PPR1 153 aa8.49□□□□□ -1.05
PTPRK-221ENST00000532331 BRWD1-AS2P59051 145 aa8.49□□□□□ -1.05
PTPRK-221ENST00000532331 Q6ZTI0 123 aa8.49□□□□□ -1.05
PTPRK-221ENST00000532331 C18orf65Q6ZTR6 163 aa8.49□□□□□ -1.05
PTPRK-221ENST00000532331 LY6G6CO95867 125 aa8.49□□□□□ -1.05
PTPRK-221ENST00000532331 KIR2DL5BA0A0G2JN68 375 aa8.49□□□□□ -1.05
PTPRK-221ENST00000532331 KIR2DL5BA0A0G2JPC4 375 aa8.49□□□□□ -1.05
PTPRK-221ENST00000532331 KIR2DL5AQ8N109 375 aa8.49□□□□□ -1.05
PTPRK-221ENST00000532331 Q8N6K4 173 aa8.49□□□□□ -1.05
PTPRK-221ENST00000532331 ANKRD29Q8N6D5 301 aa8.48□□□□□ -1.05
PTPRK-221ENST00000532331 NPSP0C0P6 89 aa8.48□□□□□ -1.05
PTPRK-221ENST00000532331 A4D1N5 150 aa8.48□□□□□ -1.05
PTPRK-221ENST00000532331 FUSP35637 526 aaKnown RBP eCLIP8.48□□□□□ -1.053e-6■■■■□ 20.3
PTPRK-221ENST00000532331 CRYGDP07320 174 aa8.48□□□□□ -1.05
PTPRK-221ENST00000532331 SPAG11BQ08648 103 aa8.48□□□□□ -1.05
PTPRK-221ENST00000532331 Q6ZS46 218 aa8.48□□□□□ -1.05
PTPRK-221ENST00000532331 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
PTPRK-221ENST00000532331 Q6ZPA2 131 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms