RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 P0DMU3 169 aa11.13□□□□□ -0.63
NXF1-213ENST00000532297 FAM231AP0DMU4 169 aa11.13□□□□□ -0.63
NXF1-213ENST00000532297 FAM231CP0DMU5 169 aa11.13□□□□□ -0.63
NXF1-213ENST00000532297 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
NXF1-213ENST00000532297 ATXN8Q156A1 80 aa11.13□□□□□ -0.63
NXF1-213ENST00000532297 ZNF876PQ49A33 203 aa11.13□□□□□ -0.63
NXF1-213ENST00000532297 LINC01620Q4KN68 170 aa11.13□□□□□ -0.63
NXF1-213ENST00000532297 MUSTN1Q8IVN3 82 aa11.13□□□□□ -0.63
NXF1-213ENST00000532297 ITLN2Q8WWU7 325 aaPredicted RBP11.13□□□□□ -0.63
NXF1-213ENST00000532297 BEX4Q9NWD9 120 aaPredicted RBP11.13□□□□□ -0.63
NXF1-213ENST00000532297 ZFYVE26Q68DK2 2539 aa11.13□□□□□ -0.63
NXF1-213ENST00000532297 TIMM17AQ99595 171 aa11.12□□□□□ -0.63
NXF1-213ENST00000532297 MOB4Q9Y3A3 225 aa11.12□□□□□ -0.63
NXF1-213ENST00000532297 IGHV4-61A0A0C4DH41 118 aa11.12□□□□□ -0.63
NXF1-213ENST00000532297 GNLYP22749 145 aa11.12□□□□□ -0.63
NXF1-213ENST00000532297 SMIM20Q8N5G0 67 aa11.12□□□□□ -0.63
NXF1-213ENST00000532297 IGHV3-64A0A075B6Q5 118 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 A0A0B4J2C4 111 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 POLR2KP53803 58 aaKnown RBP11.11□□□□□ -0.63
NXF1-213ENST00000532297 BLCAPP62952 87 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 C15orf53Q8NAA6 179 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 ODF3Q96PU9 254 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 VCYO14598 125 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 MED14OSP0DP75 135 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 HERV-K104P63124 156 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 Q6Q795 121 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 SHISA2Q6UWI4 295 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 JPT2Q9H910 190 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 F5H697 171 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 CFAP161Q6P656 301 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 FAM159AQ6UWV7 190 aa11.11□□□□□ -0.63
NXF1-213ENST00000532297 USP9XQ93008 2570 aaPredicted RBP11.1□□□□□ -0.63
NXF1-213ENST00000532297 LINC00315P59091 139 aa11.1□□□□□ -0.63
NXF1-213ENST00000532297 RPL32P62910 135 aaKnown RBP11.1□□□□□ -0.63
NXF1-213ENST00000532297 SUMO4Q6EEV6 95 aa11.1□□□□□ -0.63
NXF1-213ENST00000532297 KIF25-AS1Q9Y6Z4 181 aa11.1□□□□□ -0.63
NXF1-213ENST00000532297 ACACBO00763 2458 aa11.1□□□□□ -0.63
NXF1-213ENST00000532297 IGHV4OR15-8A0A075B7B6 117 aa11.1□□□□□ -0.63
NXF1-213ENST00000532297 A0A087WW49 117 aa11.1□□□□□ -0.63
NXF1-213ENST00000532297 A0A087WWL8 130 aa11.1□□□□□ -0.63
NXF1-213ENST00000532297 POM121L12Q8N7R1 296 aa11.1□□□□□ -0.63
NXF1-213ENST00000532297 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
NXF1-213ENST00000532297 LEPROTO15243 131 aa11.09□□□□□ -0.63
NXF1-213ENST00000532297 OPRPNQ99935 248 aaPredicted RBP11.09□□□□□ -0.63
NXF1-213ENST00000532297 FAM110AQ9BQ89 295 aa11.09□□□□□ -0.63
NXF1-213ENST00000532297 H3BMM0 161 aa11.09□□□□□ -0.63
NXF1-213ENST00000532297 H3BUX3 64 aa11.09□□□□□ -0.63
NXF1-213ENST00000532297 OVOL1O14753 267 aa11.09□□□□□ -0.63
NXF1-213ENST00000532297 PF4V1P10720 104 aa11.09□□□□□ -0.63
NXF1-213ENST00000532297 RPL13AP40429 203 aaKnown RBP11.09□□□□□ -0.63
NXF1-213ENST00000532297 C10orf99Q6UWK7 81 aa11.09□□□□□ -0.63
NXF1-213ENST00000532297 UBE2WQ96B02 151 aa11.09□□□□□ -0.63
NXF1-213ENST00000532297 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.08□□□□□ -0.64
NXF1-213ENST00000532297 TRBV10-2A0A0K0K1G8 114 aa11.08□□□□□ -0.64
NXF1-213ENST00000532297 NRGNQ92686 78 aa11.08□□□□□ -0.64
NXF1-213ENST00000532297 TMEM223A0PJW6 202 aa11.08□□□□□ -0.64
NXF1-213ENST00000532297 C19orf54Q5BKX5 351 aa11.08□□□□□ -0.64
NXF1-213ENST00000532297 ZNF256Q9Y2P7 627 aaPredicted RBP11.08□□□□□ -0.64
NXF1-213ENST00000532297 NDUFA4O00483 81 aa11.07□□□□□ -0.64
NXF1-213ENST00000532297 TRIAP1O43715 76 aa11.07□□□□□ -0.64
NXF1-213ENST00000532297 USP9YO00507 2555 aaPredicted RBP11.07□□□□□ -0.64
NXF1-213ENST00000532297 IGHV1-69P01742 117 aa11.07□□□□□ -0.64
NXF1-213ENST00000532297 LGALS9O00182 355 aa11.06□□□□□ -0.64
NXF1-213ENST00000532297 NXPH4O95158 308 aa11.06□□□□□ -0.64
NXF1-213ENST00000532297 IGKV3-20P01619 116 aa11.06□□□□□ -0.64
NXF1-213ENST00000532297 C2orf82Q6UX34 121 aa11.06□□□□□ -0.64
NXF1-213ENST00000532297 SOCS3O14543 225 aa11.05□□□□□ -0.64
NXF1-213ENST00000532297 TRBV30A0A0K0K1B3 111 aa11.05□□□□□ -0.64
NXF1-213ENST00000532297 TRBV27A0A0K0K1C4 114 aa11.05□□□□□ -0.64
NXF1-213ENST00000532297 FAM74A4Q5TZK3 123 aa11.05□□□□□ -0.64
NXF1-213ENST00000532297 ZNF580Q9UK33 172 aa11.05□□□□□ -0.64
NXF1-213ENST00000532297 CACNA1AO00555 2505 aa11.05□□□□□ -0.64
NXF1-213ENST00000532297 M0R2P5 195 aa11.05□□□□□ -0.64
NXF1-213ENST00000532297 MEIG1Q5JSS6 88 aa11.05□□□□□ -0.64
NXF1-213ENST00000532297 FAM19A4Q96LR4 140 aa11.05□□□□□ -0.64
NXF1-213ENST00000532297 FBN2P35556 2912 aa11.04□□□□□ -0.64
NXF1-213ENST00000532297 ZNF22P17026 224 aaPredicted RBP11.04□□□□□ -0.64
NXF1-213ENST00000532297 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
NXF1-213ENST00000532297 IGHV4-30-2A0A087WSY4 118 aa11.04□□□□□ -0.64
NXF1-213ENST00000532297 AVPP01185 164 aa11.04□□□□□ -0.64
NXF1-213ENST00000532297 MXRA5Q9NR99 2828 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 A0A0J9YXY3 114 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 ADARB2-AS1A8MUL3 147 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 PRSS2P07478 247 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 RHPN1-AS1Q9BWJ2 59 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 A0A0J9YXV3 536 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 H7C423 109 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 ZNF56Q15929 161 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 MAPK1IP1LQ8NDC0 245 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 USMG5Q96IX5 58 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 MYO18BQ8IUG5 2567 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 IGSF10Q6WRI0 2623 aa11.03□□□□□ -0.64
NXF1-213ENST00000532297 APRG1Q8IVJ8 170 aa11.02□□□□□ -0.64
NXF1-213ENST00000532297 ICOSQ9Y6W8 199 aa11.02□□□□□ -0.65
NXF1-213ENST00000532297 TRAV12-2A0A075B6T6 113 aa11.01□□□□□ -0.65
NXF1-213ENST00000532297 HIST2H2BDQ6DRA6 164 aa11.01□□□□□ -0.65
NXF1-213ENST00000532297 DUX3Q96PT4 197 aa11.01□□□□□ -0.65
NXF1-213ENST00000532297 CHCHD5Q9BSY4 110 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms