RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 H7C1H1 209 aa8.76□□□□□ -1.01
COPB1-208ENST00000532088 ELOBQ15370 118 aa8.76□□□□□ -1.01
COPB1-208ENST00000532088 C15orf53Q8NAA6 179 aa8.76□□□□□ -1.01
COPB1-208ENST00000532088 PRADC1Q9BSG0 188 aa8.76□□□□□ -1.01
COPB1-208ENST00000532088 URGCP-MRPS24S4R325 110 aa8.76□□□□□ -1.01
COPB1-208ENST00000532088 K7EQD1 137 aa8.75□□□□□ -1.01
COPB1-208ENST00000532088 HTN3P15516 51 aa8.75□□□□□ -1.01
COPB1-208ENST00000532088 CAMPP49913 170 aa8.75□□□□□ -1.01
COPB1-208ENST00000532088 ZNF56Q15929 161 aa8.75□□□□□ -1.01
COPB1-208ENST00000532088 FAM104BQ5XKR9 115 aa8.75□□□□□ -1.01
COPB1-208ENST00000532088 SLC25A29Q8N8R3 303 aa8.75□□□□□ -1.01
COPB1-208ENST00000532088 VSIG2Q96IQ7 327 aa8.75□□□□□ -1.01
COPB1-208ENST00000532088 YPEL4Q96NS1 127 aa8.75□□□□□ -1.01
COPB1-208ENST00000532088 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
COPB1-208ENST00000532088 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
COPB1-208ENST00000532088 KRTAP4-8A0A0G2JLE6 195 aa8.74□□□□□ -1.01
COPB1-208ENST00000532088 MGPP08493 103 aa8.74□□□□□ -1.01
COPB1-208ENST00000532088 RAB4AP20338 218 aa8.74□□□□□ -1.01
COPB1-208ENST00000532088 TMEM88Q6PEY1 159 aa8.74□□□□□ -1.01
COPB1-208ENST00000532088 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
COPB1-208ENST00000532088 MRAP2Q96G30 205 aa8.74□□□□□ -1.01
COPB1-208ENST00000532088 RNF185Q96GF1 192 aa8.74□□□□□ -1.01
COPB1-208ENST00000532088 GNB1LQ9BYB4 327 aa8.74□□□□□ -1.01
COPB1-208ENST00000532088 F5H697 171 aa8.73□□□□□ -1.01
COPB1-208ENST00000532088 M0QY20 66 aa8.73□□□□□ -1.01
COPB1-208ENST00000532088 HLA-DQA1P01909 254 aa8.73□□□□□ -1.01
COPB1-208ENST00000532088 MT-ND6P03923 174 aa8.73□□□□□ -1.01
COPB1-208ENST00000532088 SUMO4Q6EEV6 95 aa8.73□□□□□ -1.01
COPB1-208ENST00000532088 Q6ZSN1 163 aa8.73□□□□□ -1.01
COPB1-208ENST00000532088 AMN1Q8IY45 258 aa8.73□□□□□ -1.01
COPB1-208ENST00000532088 DNAJC30Q96LL9 226 aa8.73□□□□□ -1.01
COPB1-208ENST00000532088 PPP1R17O96001 155 aa8.72□□□□□ -1.01
COPB1-208ENST00000532088 PPBPP02775 128 aa8.72□□□□□ -1.01
COPB1-208ENST00000532088 LINC00694P0DN24 101 aa8.72□□□□□ -1.01
COPB1-208ENST00000532088 MRPL23Q16540 153 aaKnown RBP8.72□□□□□ -1.01
COPB1-208ENST00000532088 TMEM136Q6ZRR5 245 aa8.72□□□□□ -1.01
COPB1-208ENST00000532088 ICOSQ9Y6W8 199 aa8.72□□□□□ -1.01
COPB1-208ENST00000532088 TGIF2-C20orf24A0A0A6YYL0 155 aa8.71□□□□□ -1.02
COPB1-208ENST00000532088 IGLL5B9A064 214 aa8.71□□□□□ -1.02
COPB1-208ENST00000532088 RPL36AP83881 106 aaKnown RBP8.71□□□□□ -1.02
COPB1-208ENST00000532088 CBLN2Q8IUK8 224 aa8.71□□□□□ -1.02
COPB1-208ENST00000532088 RPL36ALQ969Q0 106 aaKnown RBP8.71□□□□□ -1.02
COPB1-208ENST00000532088 TRBV7-3A0A075B6L6 115 aa8.7□□□□□ -1.02
COPB1-208ENST00000532088 A0A0J9YY99 117 aa8.7□□□□□ -1.02
COPB1-208ENST00000532088 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
COPB1-208ENST00000532088 GYPEP15421 78 aa8.7□□□□□ -1.02
COPB1-208ENST00000532088 MRPL51Q4U2R6 128 aaKnown RBP8.7□□□□□ -1.02
COPB1-208ENST00000532088 CASC10Q5T4H9 136 aa8.7□□□□□ -1.02
COPB1-208ENST00000532088 NIT2Q9NQR4 276 aa8.7□□□□□ -1.02
COPB1-208ENST00000532088 APLNQ9ULZ1 77 aa8.7□□□□□ -1.02
COPB1-208ENST00000532088 LAMTOR2Q9Y2Q5 125 aa8.7□□□□□ -1.02
COPB1-208ENST00000532088 STARD9Q9P2P6 4700 aa8.7□□□□□ -1.02
COPB1-208ENST00000532088 A0A096LPF7 62 aa8.69□□□□□ -1.02
COPB1-208ENST00000532088 PHOX2AO14813 284 aa8.69□□□□□ -1.02
COPB1-208ENST00000532088 SRIP30626 198 aa8.69□□□□□ -1.02
COPB1-208ENST00000532088 TIRAPP58753 221 aa8.69□□□□□ -1.02
COPB1-208ENST00000532088 ZFAND6Q6FIF0 208 aa8.69□□□□□ -1.02
COPB1-208ENST00000532088 NEXN-AS1Q8NBZ9 246 aa8.69□□□□□ -1.02
COPB1-208ENST00000532088 TGP01266 2768 aa8.69□□□□□ -1.02
COPB1-208ENST00000532088 PLECQ15149 4684 aaKnown RBP8.68□□□□□ -1.02
COPB1-208ENST00000532088 APCSP02743 223 aa8.68□□□□□ -1.02
COPB1-208ENST00000532088 CKS2P33552 79 aa8.68□□□□□ -1.02
COPB1-208ENST00000532088 UBE2D3P61077 147 aa8.68□□□□□ -1.02
COPB1-208ENST00000532088 UBE2D2P62837 147 aa8.68□□□□□ -1.02
COPB1-208ENST00000532088 RNF151Q2KHN1 245 aa8.68□□□□□ -1.02
COPB1-208ENST00000532088 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
COPB1-208ENST00000532088 DAZ4Q86SG3 579 aaKnown RBP8.68□□□□□ -1.02
COPB1-208ENST00000532088 ORMDL3Q8N138 153 aa8.68□□□□□ -1.02
COPB1-208ENST00000532088 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.68□□□□□ -1.02
COPB1-208ENST00000532088 DAZ3Q9NR90 486 aaKnown RBP8.68□□□□□ -1.02
COPB1-208ENST00000532088 TNFRSF18Q9Y5U5 241 aa8.68□□□□□ -1.02
COPB1-208ENST00000532088 TRAV26-2A0A0B4J265 109 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 LOC100131303A0A0U1RQF7 123 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 COLCA2A8K830 154 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 P0DMU3 169 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 FAM231AP0DMU4 169 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 FAM231CP0DMU5 169 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 RPL32P62910 135 aaKnown RBP8.67□□□□□ -1.02
COPB1-208ENST00000532088 TMEM97Q5BJF2 176 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 OR10J3Q5JRS4 329 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 NRACQ8N912 160 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 ZNRF2Q8NHG8 242 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 C20orf78Q9BR46 151 aa8.67□□□□□ -1.02
COPB1-208ENST00000532088 GAGE12JA6NER3 117 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 PRSS47A8MTI9 375 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 D6R8Y8 96 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 NUDT3O95989 172 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 GAGE1Q13065 139 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 GAGE4Q13068 117 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 GAGE5Q13069 117 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 GAGE13Q4V321 117 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 ATP6V0E2Q8NHE4 81 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 Q9UF83 564 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 TRAPPC1Q9Y5R8 145 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 CSMD3Q7Z407 3707 aa8.66□□□□□ -1.02
COPB1-208ENST00000532088 SCO1O75880 301 aa8.65□□□□□ -1.02
COPB1-208ENST00000532088 RPL39LQ96EH5 51 aaKnown RBP8.65□□□□□ -1.02
COPB1-208ENST00000532088 PRELID3AQ96N28 172 aa8.65□□□□□ -1.02
COPB1-208ENST00000532088 GTSF1LQ9H1H1 148 aa8.65□□□□□ -1.02
COPB1-208ENST00000532088 ST20Q9HBF5 79 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms