RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 HIST3H2BBQ8N257 126 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 MORN4Q8NDC4 146 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 OR8J3Q8NGG0 315 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 OR8D4Q8NGM9 314 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 TERB2Q8NHR7 220 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 DNAJC9Q8WXX5 260 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 MAGOHBQ96A72 148 aaKnown RBP1.11□□□□□ -2.23
CD44-233ENST00000531141 GPX7Q96SL4 187 aaPredicted RBP1.11□□□□□ -2.23
CD44-233ENST00000531141 YIPF3Q9GZM5 350 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 OR8D2Q9GZM6 311 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 TP73-AS1Q9UF72 201 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 HSPB8Q9UJY1 196 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 PCTPQ9UKL6 214 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 EPDR1Q9UM22 224 aa1.11□□□□□ -2.23
CD44-233ENST00000531141 TRGV2A0A075B6R0 118 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 A0A096LPI6 279 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 A0A0D9SG52 128 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 TRBV7-6A0A0J9YX20 115 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 A0A1W2PQD3 144 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 C7orf71A4D174 169 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 C5orf58C9J3I9 102 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 ATP6V1G2-DDX39BF2Z307 99 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 M0R378 163 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 SLC22A1O15245 554 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 LYZL6O75951 148 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 CST7O76096 145 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 DPM2O94777 84 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 ANGP03950 147 aaKnown RBP1.1□□□□□ -2.23
CD44-233ENST00000531141 UBBP0CG47 229 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 RPL7P18124 248 aaKnown RBP1.1□□□□□ -2.23
CD44-233ENST00000531141 HLA-DMBP28068 263 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 SRIP30626 198 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 S100A11P31949 105 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 FXYD2P54710 66 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 NDUFA6P56556 154 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 MYL5Q02045 173 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 ZNF90Q03938 601 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 NDUFA5Q16718 116 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 RPL13AP3Q6NVV1 102 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 LYZL1Q6UWQ5 148 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 C2orf91Q6ZV80 131 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 PHF5AQ7RTV0 110 aaKnown RBP1.1□□□□□ -2.23
CD44-233ENST00000531141 LHFPL1Q86WI0 220 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 BORCS8Q96FH0 119 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 HIST1H2BLQ99880 126 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 TIMM21Q9BVV7 248 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 OR2H1Q9GZK4 316 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 DYNLRB1Q9NP97 96 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 OSTCQ9NRP0 149 aa1.1□□□□□ -2.23
CD44-233ENST00000531141 NHP2Q9NX24 153 aaKnown RBP1.1□□□□□ -2.23
CD44-233ENST00000531141 LRP1Q07954 4544 aaKnown RBP1.09□□□□□ -2.23
CD44-233ENST00000531141 IGHV1-58A0A0C4DH39 117 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 IGKV1-9A0A0C4DH69 117 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 PVALEFA0A1B0GWK0 134 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 TCRBV4S1A1TA0A5B7 111 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 NUPR2A6NF83 97 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 CCDC160A6NGH7 325 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 MIF4GDA9UHW6 222 aaKnown RBP1.09□□□□□ -2.23
CD44-233ENST00000531141 H7BYZ3 331 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 HIST1H2BKO60814 126 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 OR2H2O95918 312 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 APOC1P02654 83 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 C1QCP02747 245 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 IFNA4P05014 189 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 HIST1H2BJP06899 126 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 ZNF728P0DKX0 622 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 FKBP2P26885 142 aaKnown RBP1.09□□□□□ -2.23
CD44-233ENST00000531141 RNASE4P34096 147 aaKnown RBP1.09□□□□□ -2.23
CD44-233ENST00000531141 SDC2P34741 201 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 RPL35P42766 123 aaKnown RBP1.09□□□□□ -2.23
CD44-233ENST00000531141 DEFA3P59666 94 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 MSMO1Q15800 293 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 WHAMMP3Q1A5X7 153 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 VMA21Q3ZAQ7 101 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 LELP1Q5T871 98 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 Q5VSD8 79 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 PDZD9Q8IXQ8 264 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 TCTE3Q8IZS6 198 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 OR52R1Q8NGF1 315 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 PFN4Q8NHR9 129 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 TMEM106AQ96A25 262 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 MCEEQ96PE7 176 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 NABP2Q9BQ15 211 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 NAA38Q9BRA0 125 aaKnown RBP1.09□□□□□ -2.23
CD44-233ENST00000531141 LINC00467Q9BRT7 94 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 TTTY13Q9BZ97 58 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 POPDC3Q9HBV1 291 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 CALML5Q9NZT1 146 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 TIMM9Q9Y5J7 89 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 VPS13BQ7Z7G8 4022 aa1.09□□□□□ -2.23
CD44-233ENST00000531141 FAT3Q8TDW7 4589 aa1.09□□□□□ -2.24
CD44-233ENST00000531141 GPR98Q8WXG9 6306 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 TRAV7A0A075B6U4 112 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 TRBV10-2A0A0K0K1G8 114 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 C1orf196B1AJZ1 125 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 C9JAW5 83 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 GABARAPH6UMI1 98 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 H7C2G1 150 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 TMEM256-PLSCR3K7ERE1 68 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 M0R233 179 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms