RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 LINC00862A6NCI5 91 aa10.34□□□□□ -0.75
CPSF1-205ENST00000531042 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
CPSF1-205ENST00000531042 Q0VG73 95 aa10.34□□□□□ -0.75
CPSF1-205ENST00000531042 ZNF56Q15929 161 aa10.34□□□□□ -0.75
CPSF1-205ENST00000531042 SLC7A5P1Q8MH63 180 aa10.34□□□□□ -0.75
CPSF1-205ENST00000531042 LINC00528Q8N1L1 170 aa10.34□□□□□ -0.75
CPSF1-205ENST00000531042 TMEM262E9PQX1 116 aa10.33□□□□□ -0.76
CPSF1-205ENST00000531042 H2AFB1P0C5Y9 115 aa10.33□□□□□ -0.76
CPSF1-205ENST00000531042 OR5AL1P0C617 328 aa10.33□□□□□ -0.76
CPSF1-205ENST00000531042 MUC21A0A0G2JKD1 596 aa10.32□□□□□ -0.76
CPSF1-205ENST00000531042 MUC21A0A140T8X8 626 aa10.32□□□□□ -0.76
CPSF1-205ENST00000531042 EIF5AP63241 154 aaKnown RBP10.32□□□□□ -0.76
CPSF1-205ENST00000531042 SPANXN1Q5VSR9 72 aa10.32□□□□□ -0.76
CPSF1-205ENST00000531042 ENHOQ6UWT2 76 aa10.32□□□□□ -0.76
CPSF1-205ENST00000531042 SCXQ7RTU7 201 aa10.32□□□□□ -0.76
CPSF1-205ENST00000531042 MPV17L2Q567V2 206 aa10.31□□□□□ -0.76
CPSF1-205ENST00000531042 C15orf54Q8N8G6 183 aa10.31□□□□□ -0.76
CPSF1-205ENST00000531042 C1orf43Q9BWL3 253 aa10.31□□□□□ -0.76
CPSF1-205ENST00000531042 MED9Q9NWA0 146 aa10.31□□□□□ -0.76
CPSF1-205ENST00000531042 F5H697 171 aa10.3□□□□□ -0.76
CPSF1-205ENST00000531042 RPL35P42766 123 aaKnown RBP10.3□□□□□ -0.76
CPSF1-205ENST00000531042 SSTP61278 116 aa10.3□□□□□ -0.76
CPSF1-205ENST00000531042 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.3□□□□□ -0.76
CPSF1-205ENST00000531042 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
CPSF1-205ENST00000531042 CRPP02741 224 aa10.29□□□□□ -0.76
CPSF1-205ENST00000531042 C14orf177Q52M58 125 aa10.29□□□□□ -0.76
CPSF1-205ENST00000531042 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
CPSF1-205ENST00000531042 NTM-AS1Q6ZSK4 140 aa10.29□□□□□ -0.76
CPSF1-205ENST00000531042 CHCHD5Q9BSY4 110 aa10.29□□□□□ -0.76
CPSF1-205ENST00000531042 CHAC1Q9BUX1 264 aa10.29□□□□□ -0.76
CPSF1-205ENST00000531042 VAX2Q9UIW0 290 aa10.29□□□□□ -0.76
CPSF1-205ENST00000531042 J3QL48 77 aa10.28□□□□□ -0.76
CPSF1-205ENST00000531042 ANGP03950 147 aaKnown RBP10.28□□□□□ -0.76
CPSF1-205ENST00000531042 SMIM17P0DL12 118 aa10.28□□□□□ -0.76
CPSF1-205ENST00000531042 PKIAP61925 76 aa10.28□□□□□ -0.76
CPSF1-205ENST00000531042 CCL20P78556 96 aa10.28□□□□□ -0.76
CPSF1-205ENST00000531042 TMEM97Q5BJF2 176 aa10.28□□□□□ -0.76
CPSF1-205ENST00000531042 C11orf52Q96A22 123 aa10.28□□□□□ -0.76
CPSF1-205ENST00000531042 DERL1Q9BUN8 251 aa10.28□□□□□ -0.76
CPSF1-205ENST00000531042 MANBALQ9NQG1 85 aa10.28□□□□□ -0.76
CPSF1-205ENST00000531042 EIF5AL1Q6IS14 154 aaKnown RBP10.27□□□□□ -0.77
CPSF1-205ENST00000531042 CIRBP-AS1Q8TBR5 109 aa10.27□□□□□ -0.77
CPSF1-205ENST00000531042 DEFB104AQ8WTQ1 72 aa10.27□□□□□ -0.77
CPSF1-205ENST00000531042 AP1S3Q96PC3 154 aa10.27□□□□□ -0.77
CPSF1-205ENST00000531042 GNG13Q9P2W3 67 aa10.27□□□□□ -0.77
CPSF1-205ENST00000531042 TRAV1-1A0A0B4J248 108 aa10.26□□□□□ -0.77
CPSF1-205ENST00000531042 MIAQ16674 131 aa10.26□□□□□ -0.77
CPSF1-205ENST00000531042 KRTAP29-1A8MX34 341 aaPredicted RBP10.25□□□□□ -0.77
CPSF1-205ENST00000531042 IGLV2-8P01709 118 aa10.25□□□□□ -0.77
CPSF1-205ENST00000531042 IGLC6P0CF74 106 aa10.25□□□□□ -0.77
CPSF1-205ENST00000531042 GZMBP10144 247 aa10.25□□□□□ -0.77
CPSF1-205ENST00000531042 CENPWQ5EE01 88 aa10.25□□□□□ -0.77
CPSF1-205ENST00000531042 COMMD7Q86VX2 200 aa10.25□□□□□ -0.77
CPSF1-205ENST00000531042 PRR34Q9NV39 138 aa10.25□□□□□ -0.77
CPSF1-205ENST00000531042 C19orf71A6NCJ1 209 aa10.24□□□□□ -0.77
CPSF1-205ENST00000531042 USP17L23D6RBM5 183 aa10.24□□□□□ -0.77
CPSF1-205ENST00000531042 M0QY20 66 aa10.24□□□□□ -0.77
CPSF1-205ENST00000531042 HLA-DQA1P01909 254 aa10.24□□□□□ -0.77
CPSF1-205ENST00000531042 KRTAP10-4P60372 401 aaPredicted RBP10.24□□□□□ -0.77
CPSF1-205ENST00000531042 RPS20P60866 119 aaKnown RBP10.24□□□□□ -0.77
CPSF1-205ENST00000531042 RBX1P62877 108 aa10.24□□□□□ -0.77
CPSF1-205ENST00000531042 GAGE6Q13070 117 aa10.24□□□□□ -0.77
CPSF1-205ENST00000531042 FER1L6-AS1Q8NA97 138 aa10.24□□□□□ -0.77
CPSF1-205ENST00000531042 DAZAP1Q96EP5 407 aaKnown RBP10.24□□□□□ -0.77
CPSF1-205ENST00000531042 TPPP3Q9BW30 176 aa10.24□□□□□ -0.77
CPSF1-205ENST00000531042 TRBV25-1A0A075B6N4 114 aa10.23□□□□□ -0.77
CPSF1-205ENST00000531042 RAB19A4D1S5 217 aa10.23□□□□□ -0.77
CPSF1-205ENST00000531042 MGPP08493 103 aa10.23□□□□□ -0.77
CPSF1-205ENST00000531042 RAB5CP51148 216 aa10.23□□□□□ -0.77
CPSF1-205ENST00000531042 IQCJQ1A5X6 159 aa10.23□□□□□ -0.77
CPSF1-205ENST00000531042 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
CPSF1-205ENST00000531042 OR2D3Q8NGH3 330 aa10.23□□□□□ -0.77
CPSF1-205ENST00000531042 PRSS1P07477 247 aa10.22□□□□□ -0.77
CPSF1-205ENST00000531042 SUMO4Q6EEV6 95 aa10.22□□□□□ -0.77
CPSF1-205ENST00000531042 KRTAP26-1Q6PEX3 210 aa10.22□□□□□ -0.77
CPSF1-205ENST00000531042 CLPSL2Q6UWE3 100 aa10.22□□□□□ -0.77
CPSF1-205ENST00000531042 SMIM12Q96EX1 92 aa10.22□□□□□ -0.77
CPSF1-205ENST00000531042 IGHV1-24A0A0C4DH33 117 aa10.21□□□□□ -0.77
CPSF1-205ENST00000531042 TEX46H3BTG2 121 aa10.21□□□□□ -0.77
CPSF1-205ENST00000531042 H7C1H1 209 aa10.21□□□□□ -0.77
CPSF1-205ENST00000531042 GNG4P50150 75 aa10.21□□□□□ -0.77
CPSF1-205ENST00000531042 CACNG7P62955 275 aa10.21□□□□□ -0.77
CPSF1-205ENST00000531042 DGAT2L7PQ6IED9 249 aa10.21□□□□□ -0.77
CPSF1-205ENST00000531042 F2Z2F3 143 aa10.2□□□□□ -0.78
CPSF1-205ENST00000531042 PDE6DO43924 150 aa10.2□□□□□ -0.78
CPSF1-205ENST00000531042 SULT1A2P50226 295 aa10.2□□□□□ -0.78
CPSF1-205ENST00000531042 MEF2BQ02080 365 aaPredicted RBP10.2□□□□□ -0.78
CPSF1-205ENST00000531042 LRP1Q07954 4544 aaKnown RBP10.2□□□□□ -0.78
CPSF1-205ENST00000531042 TRBV20OR9-2A0A075B6H5 130 aa10.19□□□□□ -0.78
CPSF1-205ENST00000531042 XKRY2A2RUG3 117 aa10.19□□□□□ -0.78
CPSF1-205ENST00000531042 P01737 135 aa10.19□□□□□ -0.78
CPSF1-205ENST00000531042 RASL11AQ6T310 242 aa10.19□□□□□ -0.78
CPSF1-205ENST00000531042 LYZL1Q6UWQ5 148 aa10.19□□□□□ -0.78
CPSF1-205ENST00000531042 C9orf163Q8N9P6 203 aa10.19□□□□□ -0.78
CPSF1-205ENST00000531042 BLOC1S1P78537 153 aa10.18□□□□□ -0.78
CPSF1-205ENST00000531042 REG3AQ06141 175 aa10.18□□□□□ -0.78
CPSF1-205ENST00000531042 A0A1B0GUV1 79 aa10.17□□□□□ -0.78
CPSF1-205ENST00000531042 IFNA1P01562 189 aa10.17□□□□□ -0.78
CPSF1-205ENST00000531042 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
CPSF1-205ENST00000531042 NTF3P20783 257 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms