RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 BVES-AS1Q5T3Y7 98 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 ZFP2Q6ZN57 461 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 C2orf91Q6ZV80 131 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 STPG4Q8N801 248 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 NEXN-AS1Q8NBZ9 246 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 DNAJC30Q96LL9 226 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 MUC4Q99102 2169 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 DKK2Q9UBU2 259 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 HHLA3Q9XRX5 114 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 COX11Q9Y6N1 276 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 ASH1LQ9NR48 2969 aaKnown RBP4.08□□□□□ -1.76
PCF11-205ENST00000530906 FBN2P35556 2912 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 POLQO75417 2590 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 ABCA12Q86UK0 2595 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 TRAV12-2A0A075B6T6 113 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 OR11H12B2RN74 326 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 I3L3M4 83 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 IGKV3-20P01619 116 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 ZNF25P17030 456 aaPredicted RBP4.07□□□□□ -1.76
PCF11-205ENST00000530906 HERVK_113P61574 105 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 PMVKQ15126 192 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 ZNF56Q15929 161 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 BEAN1Q3B7T3 259 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 CD300EQ496F6 205 aaPredicted RBP4.07□□□□□ -1.76
PCF11-205ENST00000530906 ZC2HC1BQ5TFG8 222 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 LINC01006Q8NI28 216 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 RPL39LQ96EH5 51 aaKnown RBP4.07□□□□□ -1.76
PCF11-205ENST00000530906 DUX3Q96PT4 197 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 TMEM208Q9BTX3 173 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 C1QTNF4Q9BXJ3 329 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 ESM1Q9NQ30 184 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 MRPL35Q9NZE8 188 aaKnown RBP4.07□□□□□ -1.76
PCF11-205ENST00000530906 MDFICQ9P1T7 246 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 CHTOPQ9Y3Y2 248 aaKnown RBP4.07□□□□□ -1.76
PCF11-205ENST00000530906 DOPEY2Q9Y3R5 2298 aa4.07□□□□□ -1.76
PCF11-205ENST00000530906 KMT2BQ9UMN6 2715 aaPredicted RBP4.07□□□□□ -1.76
PCF11-205ENST00000530906 ITPR3Q14573 2671 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 IGIPA6NJ69 53 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 KNCNA6PVL3 124 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 NMUP48645 174 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 FXYD7P58549 80 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 SMAGPQ0VAQ4 97 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 MORN3Q6PF18 240 aaPredicted RBP4.06□□□□□ -1.76
PCF11-205ENST00000530906 C18orf65Q6ZTR6 163 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 NDUFA11Q86Y39 141 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 STHQ8IWL8 128 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 OR11H2Q8NH07 326 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 BAALCQ8WXS3 180 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 MCRIP2Q9BUT9 160 aaKnown RBP4.06□□□□□ -1.76
PCF11-205ENST00000530906 PYGO1Q9Y3Y4 419 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 APCP25054 2843 aa4.06□□□□□ -1.76
PCF11-205ENST00000530906 MYO9AB2RTY4 2548 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 A0A087WWL8 130 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 TRBV10-1A0A0K0K1A3 114 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 A0A1W2PRX2 142 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 PRSS29PA6NIE9 313 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 E9PLD3 99 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 H3BRM9 83 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 IGLV1-51P01701 117 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 IGHV3-53P01767 116 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 CD28P10747 220 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 INSL3P51460 131 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 PROK1P58294 105 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 ODF3L2Q3SX64 289 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 FAM74A4Q5TZK3 123 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 UFSP1Q6NVU6 142 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 NFE4Q86UQ8 179 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 C20orf203Q8NBC4 194 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 C11orf72Q8NBR9 251 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 LINC01587Q99440 93 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 CITED2Q99967 270 aaPredicted RBP4.05□□□□□ -1.76
PCF11-205ENST00000530906 TP53TG1Q9Y2A0 90 aa4.05□□□□□ -1.76
PCF11-205ENST00000530906 CENPEQ02224 2701 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 TRBV25-1A0A075B6N4 114 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 RBMY1BA6NDE4 496 aaKnown RBP4.04□□□□□ -1.76
PCF11-205ENST00000530906 RBMY1EA6NEQ0 496 aaKnown RBP4.04□□□□□ -1.76
PCF11-205ENST00000530906 C11orf86A6NJI1 115 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 RS1O15537 224 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 TSHBP01222 138 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 RBMY1DP0C7P1 496 aaKnown RBP4.04□□□□□ -1.76
PCF11-205ENST00000530906 RBMY1A1P0DJD3 496 aaKnown RBP4.04□□□□□ -1.76
PCF11-205ENST00000530906 RBMY1CP0DJD4 496 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 UBE2V1Q13404 147 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 RBMY1FQ15415 496 aaKnown RBP4.04□□□□□ -1.76
PCF11-205ENST00000530906 TMEM263Q8WUH6 116 aaKnown RBP4.04□□□□□ -1.76
PCF11-205ENST00000530906 CHAC1Q9BUX1 264 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 TIMM21Q9BVV7 248 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 TM2D2Q9BX73 214 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 CST9LQ9H4G1 147 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 JPT2Q9H910 190 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 SPANXA1Q9NS26 97 aa4.04□□□□□ -1.76
PCF11-205ENST00000530906 TEX15Q9BXT5 2789 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 CRYBG3Q68DQ2 2970 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 CELSR2Q9HCU4 2923 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 MYMXA0A1B0GTQ4 84 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 TAX1BP3O14907 124 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 SAP30O75446 220 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 DAZ2Q13117 558 aaKnown RBP4.03□□□□□ -1.76
PCF11-205ENST00000530906 CFAP126Q5VTH2 177 aa4.03□□□□□ -1.76
PCF11-205ENST00000530906 GTF2H5Q6ZYL4 71 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms