RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 SSBP4Q9BWG4 385 aaPredicted RBP9.56□□□□□ -0.88
CAPN1-219ENST00000530495 ZNF471Q9BX82 626 aaPredicted RBP9.56□□□□□ -0.88
CAPN1-219ENST00000530495 VAX2Q9UIW0 290 aa9.56□□□□□ -0.88
CAPN1-219ENST00000530495 A0A0D9SG52 128 aa9.55□□□□□ -0.88
CAPN1-219ENST00000530495 CXCL1P09341 107 aa9.55□□□□□ -0.88
CAPN1-219ENST00000530495 GIPP09681 153 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-219ENST00000530495 RBX1P62877 108 aa9.55□□□□□ -0.88
CAPN1-219ENST00000530495 CST9LP1Q5W188 147 aa9.55□□□□□ -0.88
CAPN1-219ENST00000530495 LINC00269Q8N2A0 174 aa9.55□□□□□ -0.88
CAPN1-219ENST00000530495 MAP1LC3B2A6NCE7 125 aa9.54□□□□□ -0.88
CAPN1-219ENST00000530495 CIRBPQ14011 172 aaKnown RBP9.54□□□□□ -0.88
CAPN1-219ENST00000530495 MAP1LC3BQ9GZQ8 125 aa9.54□□□□□ -0.88
CAPN1-219ENST00000530495 PKHD1L1Q86WI1 4243 aa9.53□□□□□ -0.88
CAPN1-219ENST00000530495 F5H697 171 aa9.53□□□□□ -0.88
CAPN1-219ENST00000530495 SNAI2O43623 268 aa9.53□□□□□ -0.88
CAPN1-219ENST00000530495 OR5AL1P0C617 328 aa9.53□□□□□ -0.88
CAPN1-219ENST00000530495 AKR1C3P42330 323 aa9.53□□□□□ -0.88
CAPN1-219ENST00000530495 CNBPP62633 177 aaKnown RBP9.53□□□□□ -0.88
CAPN1-219ENST00000530495 DERL1Q9BUN8 251 aa9.53□□□□□ -0.88
CAPN1-219ENST00000530495 KIF25-AS1Q9Y6Z4 181 aa9.53□□□□□ -0.88
CAPN1-219ENST00000530495 TRBV25-1A0A075B6N4 114 aa9.52□□□□□ -0.89
CAPN1-219ENST00000530495 FXYD6-FXYD2A0A087WZ82 144 aa9.52□□□□□ -0.89
CAPN1-219ENST00000530495 S100A9P06702 114 aaKnown RBP9.52□□□□□ -0.89
CAPN1-219ENST00000530495 GAGE6Q13070 117 aa9.52□□□□□ -0.89
CAPN1-219ENST00000530495 SPANXN1Q5VSR9 72 aa9.52□□□□□ -0.89
CAPN1-219ENST00000530495 CLPSL2Q6UWE3 100 aa9.52□□□□□ -0.89
CAPN1-219ENST00000530495 STOML3Q8TAV4 291 aa9.52□□□□□ -0.89
CAPN1-219ENST00000530495 MLST8Q9BVC4 326 aa9.52□□□□□ -0.89
CAPN1-219ENST00000530495 MUC21A0A0G2JKD1 596 aa9.51□□□□□ -0.89
CAPN1-219ENST00000530495 MUC21A0A140T8X8 626 aa9.51□□□□□ -0.89
CAPN1-219ENST00000530495 PAGE4O60829 102 aa9.51□□□□□ -0.89
CAPN1-219ENST00000530495 IQCJQ1A5X6 159 aa9.51□□□□□ -0.89
CAPN1-219ENST00000530495 Q6ZNX1 250 aa9.51□□□□□ -0.89
CAPN1-219ENST00000530495 REG3AQ06141 175 aa9.5□□□□□ -0.89
CAPN1-219ENST00000530495 CYTL1Q9NRR1 136 aa9.5□□□□□ -0.89
CAPN1-219ENST00000530495 TRAV8-4A0A0B4J246 113 aa9.49□□□□□ -0.89
CAPN1-219ENST00000530495 IGHV1-24A0A0C4DH33 117 aa9.49□□□□□ -0.89
CAPN1-219ENST00000530495 hDV102S1A0JD36 115 aa9.49□□□□□ -0.89
CAPN1-219ENST00000530495 P01737 135 aa9.49□□□□□ -0.89
CAPN1-219ENST00000530495 SMIM17P0DL12 118 aa9.49□□□□□ -0.89
CAPN1-219ENST00000530495 BAGE2Q86Y30 109 aa9.49□□□□□ -0.89
CAPN1-219ENST00000530495 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
CAPN1-219ENST00000530495 RNF185Q96GF1 192 aa9.49□□□□□ -0.89
CAPN1-219ENST00000530495 IGLV10-54A0A075B6I4 117 aa9.48□□□□□ -0.89
CAPN1-219ENST00000530495 IGHV3-64A0A075B6Q5 118 aa9.48□□□□□ -0.89
CAPN1-219ENST00000530495 SLPIP03973 132 aa9.48□□□□□ -0.89
CAPN1-219ENST00000530495 SSTP61278 116 aa9.48□□□□□ -0.89
CAPN1-219ENST00000530495 C20orf203Q8NBC4 194 aa9.48□□□□□ -0.89
CAPN1-219ENST00000530495 A0A087WYN8 130 aa9.47□□□□□ -0.89
CAPN1-219ENST00000530495 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-219ENST00000530495 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
CAPN1-219ENST00000530495 M0QY20 66 aa9.47□□□□□ -0.89
CAPN1-219ENST00000530495 MBD3L1Q8WWY6 194 aa9.47□□□□□ -0.89
CAPN1-219ENST00000530495 AP1S3Q96PC3 154 aa9.47□□□□□ -0.89
CAPN1-219ENST00000530495 SCO2A0A1W2PP80 73 aa9.46□□□□□ -0.9
CAPN1-219ENST00000530495 G3V3Q6 166 aa9.46□□□□□ -0.9
CAPN1-219ENST00000530495 GZMBP10144 247 aa9.46□□□□□ -0.9
CAPN1-219ENST00000530495 TMUB2Q71RG4 321 aa9.46□□□□□ -0.9
CAPN1-219ENST00000530495 SPACA4Q8TDM5 124 aa9.46□□□□□ -0.9
CAPN1-219ENST00000530495 SFT2D1Q8WV19 159 aa9.46□□□□□ -0.9
CAPN1-219ENST00000530495 AP5S1Q9NUS5 200 aa9.46□□□□□ -0.9
CAPN1-219ENST00000530495 H7C1H1 209 aa9.45□□□□□ -0.9
CAPN1-219ENST00000530495 CHTF8P0CG12 524 aa9.45□□□□□ -0.9
CAPN1-219ENST00000530495 PLAC8Q9NZF1 115 aa9.45□□□□□ -0.9
CAPN1-219ENST00000530495 IGLV4-60A0A075B6I1 120 aa9.44□□□□□ -0.9
CAPN1-219ENST00000530495 ARPC5O15511 151 aa9.44□□□□□ -0.9
CAPN1-219ENST00000530495 RAB5CP51148 216 aa9.44□□□□□ -0.9
CAPN1-219ENST00000530495 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
CAPN1-219ENST00000530495 GFRA4Q9GZZ7 299 aa9.44□□□□□ -0.9
CAPN1-219ENST00000530495 PFDN1O60925 122 aa9.43□□□□□ -0.9
CAPN1-219ENST00000530495 SUMO4Q6EEV6 95 aa9.43□□□□□ -0.9
CAPN1-219ENST00000530495 UMAD1C9J7I0 102 aa9.42□□□□□ -0.9
CAPN1-219ENST00000530495 MGPP08493 103 aa9.42□□□□□ -0.9
CAPN1-219ENST00000530495 IGLC6P0CF74 106 aa9.42□□□□□ -0.9
CAPN1-219ENST00000530495 NKX2-5P52952 324 aaPredicted RBP9.42□□□□□ -0.9
CAPN1-219ENST00000530495 FAM213BQ8TBF2 198 aa9.42□□□□□ -0.9
CAPN1-219ENST00000530495 PGLYRP4Q96LB8 373 aa9.42□□□□□ -0.9
CAPN1-219ENST00000530495 A0A1B0GV50 99 aa9.41□□□□□ -0.9
CAPN1-219ENST00000530495 PHOX2AO14813 284 aa9.41□□□□□ -0.9
CAPN1-219ENST00000530495 RPL35P42766 123 aaKnown RBP9.41□□□□□ -0.9
CAPN1-219ENST00000530495 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
CAPN1-219ENST00000530495 FER1L6-AS1Q8NA97 138 aa9.41□□□□□ -0.9
CAPN1-219ENST00000530495 C7orf33Q8WU49 177 aa9.41□□□□□ -0.9
CAPN1-219ENST00000530495 LINC01600Q96MT4 127 aa9.41□□□□□ -0.9
CAPN1-219ENST00000530495 DPH3P1Q9H4G8 78 aa9.41□□□□□ -0.9
CAPN1-219ENST00000530495 CACNG7P62955 275 aa9.4□□□□□ -0.9
CAPN1-219ENST00000530495 CFAP161Q6P656 301 aa9.4□□□□□ -0.9
CAPN1-219ENST00000530495 KCNRGQ8N5I3 272 aa9.4□□□□□ -0.9
CAPN1-219ENST00000530495 TPPP3Q9BW30 176 aa9.4□□□□□ -0.9
CAPN1-219ENST00000530495 NIT2Q9NQR4 276 aa9.4□□□□□ -0.9
CAPN1-219ENST00000530495 RPS10P46783 165 aaKnown RBP9.39□□□□□ -0.91
CAPN1-219ENST00000530495 RPS20P60866 119 aaKnown RBP9.39□□□□□ -0.91
CAPN1-219ENST00000530495 COX6A2Q02221 97 aa9.39□□□□□ -0.91
CAPN1-219ENST00000530495 WDR73Q6P4I2 378 aa9.39□□□□□ -0.91
CAPN1-219ENST00000530495 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
CAPN1-219ENST00000530495 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
CAPN1-219ENST00000530495 F2Z2F3 143 aa9.38□□□□□ -0.91
CAPN1-219ENST00000530495 UBE2L6O14933 153 aa9.38□□□□□ -0.91
CAPN1-219ENST00000530495 H2AFB1P0C5Y9 115 aa9.38□□□□□ -0.91
CAPN1-219ENST00000530495 SULT1A2P50226 295 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms