RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 AMN1Q8IY45 258 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 NAA38Q9BRA0 125 aaKnown RBP2.81□□□□□ -1.96
USP47-209ENST00000530041 CHAC1Q9BUX1 264 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 TMEM133Q9H2Q1 129 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 NXT2Q9NPJ8 142 aaKnown RBP2.81□□□□□ -1.96
USP47-209ENST00000530041 TRBV7-3A0A075B6L6 115 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 TRBV25-1A0A075B6N4 114 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 IGHV6-1A0A0B4J1U7 121 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 LOC389332A0A1B0GUA5 103 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 LY6LH3BQJ8 138 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 J3QR89 54 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 NDUFB3O43676 98 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 DPM2O94777 84 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 IGKCP01834 107 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 IGHV1-8P0DP01 117 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 CNTFRP26992 372 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 CKS2P33552 79 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 WFDC2Q14508 124 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 C12orf74Q32Q52 190 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 Q8N8P6 123 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 FDCSPQ8NFU4 85 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 ATP6V0E2Q8NHE4 81 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 CCL17Q92583 94 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 RAB37Q96AX2 223 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 PRO3102Q9H379 93 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 FAM215AQ9Y5M1 114 aa2.8□□□□□ -1.96
USP47-209ENST00000530041 HEATR1Q9H583 2144 aaKnown RBP2.8□□□□□ -1.96
USP47-209ENST00000530041 AHCTF1Q8WYP5 2266 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 IGHV3-21A0A0B4J1V1 117 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 TRAV12-1A0A0B4J245 112 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 IGHV1-3A0A0C4DH29 117 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 A0A1B0GV72 72 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 M0R3E3 92 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 GNG7O60262 68 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 RBP4P02753 201 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 UBE2AP49459 152 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 ZNF80P51504 273 aaPredicted RBP2.79□□□□□ -1.96
USP47-209ENST00000530041 RRN3P1Q2M238 152 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 KLK9Q2XQG4 91 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 HES3Q5TGS1 186 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 LINC00337Q8N6G1 96 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 TMEM158Q8WZ71 300 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 GTSF1LQ9H1H1 148 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 RBM12B-AS1Q9P1G2 102 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 KLK9Q9UKQ9 250 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 TIMM8BQ9Y5J9 83 aaPredicted RBP2.79□□□□□ -1.96
USP47-209ENST00000530041 C5orf42Q9H799 3197 aa2.79□□□□□ -1.96
USP47-209ENST00000530041 KNTC1P50748 2209 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 INTS1Q8N201 2190 aaKnown RBP2.78□□□□□ -1.96
USP47-209ENST00000530041 IGLV11-55A0A075B6I3 123 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 A0A087WX48 190 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 IGHV3-72A0A0B4J1Y9 119 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 RBAKDNA6NC62 111 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 FABP5P3A8MUU1 101 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 C8orf87E5RJ46 101 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 BUB1B-PAK6H3BSN5 160 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 K7ERJ3 54 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 NDUFA3O95167 84 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 IL4P05112 153 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 RPL7P18124 248 aaKnown RBP2.78□□□□□ -1.96
USP47-209ENST00000530041 FXYD7P58549 80 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 CCL8P80075 99 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 C1orf195Q5TG92 126 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 MORN3Q6PF18 240 aaPredicted RBP2.78□□□□□ -1.96
USP47-209ENST00000530041 SBSPONQ8IVN8 264 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 TTC9CQ8N5M4 171 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 LINC01587Q99440 93 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 TTTY13Q9BZ97 58 aa2.78□□□□□ -1.96
USP47-209ENST00000530041 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
USP47-209ENST00000530041 FAM186AA6NE01 2351 aa2.78□□□□□ -1.97
USP47-209ENST00000530041 NAV3Q8IVL0 2385 aa2.78□□□□□ -1.97
USP47-209ENST00000530041 CADP27708 2225 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 MKI67P46013 3256 aaKnown RBP2.77□□□□□ -1.97
USP47-209ENST00000530041 IGKV2-40A0A087WW87 121 aaPredicted RBP2.77□□□□□ -1.97
USP47-209ENST00000530041 TMSB15BA0A087X1C1 80 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 TRAV8-3A0A0A6YYJ7 113 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 CENPVL3A0A0U1RRI6 287 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 MYMXA0A1B0GTQ4 84 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 H3BMG7 143 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.77□□□□□ -1.97
USP47-209ENST00000530041 IGKV2D-40P01614 121 aaPredicted RBP2.77□□□□□ -1.97
USP47-209ENST00000530041 SLC25A16P16260 332 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 PRTN3P24158 256 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 PLNP26678 52 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 UBE2D1P51668 147 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 KLRD1Q13241 179 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 EBI3Q14213 229 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 ETDBQ3ZM63 59 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 CFAP126Q5VTH2 177 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 LY6G5BQ8NDX9 201 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 MYOZ3Q8TDC0 251 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 RNASE6Q93091 150 aaKnown RBP2.77□□□□□ -1.97
USP47-209ENST00000530041 ANAPC13Q9BS18 74 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 MRPL35Q9NZE8 188 aaKnown RBP2.77□□□□□ -1.97
USP47-209ENST00000530041 PLXNB1O43157 2135 aa2.77□□□□□ -1.97
USP47-209ENST00000530041 TECTAO75443 2155 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 ARFGEF3Q5TH69 2177 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 TRAV40A0A0B4J280 105 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 IGHV3-66A0A0C4DH42 116 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 IGHV7-4-1A0A0J9YVY3 117 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms