RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	RRN3P1	Q2M238	152 aa		10.82	□□□□□ -0.68
NR1H3-231	ENST00000529540	CD300E	Q496F6	205 aa	Predicted RBP	10.82	□□□□□ -0.68
NR1H3-231	ENST00000529540	ORMDL2	Q53FV1	153 aa		10.82	□□□□□ -0.68
NR1H3-231	ENST00000529540	TENM1	Q9UKZ4	2725 aa		10.81	□□□□□ -0.68
NR1H3-231	ENST00000529540	WIPF1	O43516	503 aa		10.81	□□□□□ -0.68
NR1H3-231	ENST00000529540	CMC4	P56277	68 aa	Predicted RBP	10.81	□□□□□ -0.68
NR1H3-231	ENST00000529540	SNRPD3	P62318	126 aa	Known RBP	10.81	□□□□□ -0.68
NR1H3-231	ENST00000529540	SPANXN1	Q5VSR9	72 aa		10.81	□□□□□ -0.68
NR1H3-231	ENST00000529540	TMEM61	Q8N0U2	210 aa		10.81	□□□□□ -0.68
NR1H3-231	ENST00000529540	TOMM6	Q96B49	74 aa		10.81	□□□□□ -0.68
NR1H3-231	ENST00000529540	C16orf92	Q96LL3	132 aa		10.81	□□□□□ -0.68
NR1H3-231	ENST00000529540	C20orf78	Q9BR46	151 aa		10.81	□□□□□ -0.68
NR1H3-231	ENST00000529540	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.81	□□□□□ -0.68
NR1H3-231	ENST00000529540	MYMX	A0A1B0GTQ4	84 aa		10.8	□□□□□ -0.68
NR1H3-231	ENST00000529540	HIST1H4G	Q99525	98 aa		10.8	□□□□□ -0.68
NR1H3-231	ENST00000529540	TRAV26-2	A0A0B4J265	109 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540	OR11H12	B2RN74	326 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540		M0R381	172 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540	MED14OS	P0DP75	135 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540	NEXN-AS1	Q8NBZ9	246 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540	OR11H2	Q8NH07	326 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540	DCANP1	Q8TF63	244 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540	PRO0461	Q9UI25	63 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540		K7EQG2	157 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540	SIGMAR1	Q99720	223 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540	SPATA25	Q9BR10	227 aa		10.79	□□□□□ -0.68
NR1H3-231	ENST00000529540	IGKV3-7	A0A075B6H7	116 aa		10.78	□□□□□ -0.68
NR1H3-231	ENST00000529540		H3BVH4	76 aa		10.78	□□□□□ -0.68
NR1H3-231	ENST00000529540	CIDEA	O60543	219 aa		10.78	□□□□□ -0.68
NR1H3-231	ENST00000529540	WFDC2	Q14508	124 aa		10.78	□□□□□ -0.68
NR1H3-231	ENST00000529540	SOCS3	O14543	225 aa		10.77	□□□□□ -0.69
NR1H3-231	ENST00000529540	SUMO2	P61956	95 aa	Known RBP	10.77	□□□□□ -0.69
NR1H3-231	ENST00000529540	LINC00477	Q96M19	166 aa		10.77	□□□□□ -0.69
NR1H3-231	ENST00000529540	SCGB3A1	Q96QR1	104 aa		10.77	□□□□□ -0.69
NR1H3-231	ENST00000529540	FAM110A	Q9BQ89	295 aa		10.77	□□□□□ -0.69
NR1H3-231	ENST00000529540	DPH3P1	Q9H4G8	78 aa		10.77	□□□□□ -0.69
NR1H3-231	ENST00000529540	WNK1	Q9H4A3	2382 aa		10.77	□□□□□ -0.69
NR1H3-231	ENST00000529540	GAGE13	Q4V321	117 aa		10.76	□□□□□ -0.69
NR1H3-231	ENST00000529540	PRR9	Q5T870	116 aa		10.76	□□□□□ -0.69
NR1H3-231	ENST00000529540	RASL10A	Q92737	203 aa		10.76	□□□□□ -0.69
NR1H3-231	ENST00000529540	STAB1	Q9NY15	2570 aa		10.76	□□□□□ -0.69
NR1H3-231	ENST00000529540	GAGE12H	A6NDE8	117 aa		10.76	□□□□□ -0.69
NR1H3-231	ENST00000529540	AZU1	P20160	251 aa		10.76	□□□□□ -0.69
NR1H3-231	ENST00000529540	POM121L12	Q8N7R1	296 aa		10.76	□□□□□ -0.69
NR1H3-231	ENST00000529540	TRAV21	A0A0B4J279	112 aa		10.75	□□□□□ -0.69
NR1H3-231	ENST00000529540	PPP1R17	O96001	155 aa		10.75	□□□□□ -0.69
NR1H3-231	ENST00000529540	RPL32	P62910	135 aa	Known RBP	10.75	□□□□□ -0.69
NR1H3-231	ENST00000529540	ZFAND2A	Q8N6M9	145 aa		10.75	□□□□□ -0.69
NR1H3-231	ENST00000529540	ATP6V0E2	Q8NHE4	81 aa		10.75	□□□□□ -0.69
NR1H3-231	ENST00000529540	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.75	□□□□□ -0.69
NR1H3-231	ENST00000529540		H3BMG7	143 aa		10.74	□□□□□ -0.69
NR1H3-231	ENST00000529540	MORN3	Q6PF18	240 aa	Predicted RBP	10.74	□□□□□ -0.69
NR1H3-231	ENST00000529540	BAALC	Q8WXS3	180 aa		10.74	□□□□□ -0.69
NR1H3-231	ENST00000529540	C20orf173	Q96LM9	149 aa		10.74	□□□□□ -0.69
NR1H3-231	ENST00000529540	TMEM238L	A0A1B0GVL6	79 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	LINC01549	A6NIU2	74 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540		A6NJY4	79 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	ASIP	P42127	132 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	BEAN1	Q3B7T3	259 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540		Q6ZQT7	251 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	APRG1	Q8IVJ8	170 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	FAM19A4	Q96LR4	140 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	TRBV7-9	A0A0J9YWB2	115 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	NXPH4	O95158	308 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	ZNF688	P0C7X2	276 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	C2orf66	Q6UXQ4	117 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	PRADC1	Q9BSG0	188 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	GTSF1L	Q9H1H1	148 aa		10.73	□□□□□ -0.69
NR1H3-231	ENST00000529540	UBE2D1	P51668	147 aa		10.72	□□□□□ -0.69
NR1H3-231	ENST00000529540	ETDB	Q3ZM63	59 aa		10.72	□□□□□ -0.69
NR1H3-231	ENST00000529540	PRSS29P	A6NIE9	313 aa		10.71	□□□□□ -0.69
NR1H3-231	ENST00000529540	PAPPA-AS1	Q5QFB9	102 aa		10.71	□□□□□ -0.69
NR1H3-231	ENST00000529540	SH2D6	Q7Z4S9	175 aa		10.71	□□□□□ -0.69
NR1H3-231	ENST00000529540	OR10J6P	Q8NGY7	276 aa		10.71	□□□□□ -0.69
NR1H3-231	ENST00000529540	DUSP14	O95147	198 aa	Known RBP	10.7	□□□□□ -0.7
NR1H3-231	ENST00000529540	EGFEM1P	Q0D2K5	195 aa		10.7	□□□□□ -0.7
NR1H3-231	ENST00000529540	AMTN	Q6UX39	209 aa		10.7	□□□□□ -0.7
NR1H3-231	ENST00000529540	RPL39L	Q96EH5	51 aa	Known RBP	10.7	□□□□□ -0.7
NR1H3-231	ENST00000529540	MAP6D1	Q9H9H5	199 aa		10.7	□□□□□ -0.7
NR1H3-231	ENST00000529540	CYSLTR1	Q9Y271	337 aa		10.7	□□□□□ -0.7
NR1H3-231	ENST00000529540	ZNF815P	A8K554	130 aa		10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	S100A4	P26447	101 aa	Known RBP	10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	DEFB131A	P59861	70 aa		10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	PGPEP1	Q9NXJ5	209 aa		10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	PHLDA3	Q9Y5J5	127 aa		10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	SMAGP	Q0VAQ4	97 aa		10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	ANXA2R	Q3ZCQ2	193 aa		10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	OXLD1	Q5BKU9	147 aa		10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	LYRM7	Q5U5X0	104 aa		10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	CFAP126	Q5VTH2	177 aa		10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	C1QTNF4	Q9BXJ3	329 aa		10.69	□□□□□ -0.7
NR1H3-231	ENST00000529540	ODF3L2	Q3SX64	289 aa		10.68	□□□□□ -0.7
NR1H3-231	ENST00000529540	C14orf178	Q8N769	122 aa	Predicted RBP	10.68	□□□□□ -0.7
NR1H3-231	ENST00000529540	ANK2	Q01484	3957 aa		10.67	□□□□□ -0.7
NR1H3-231	ENST00000529540		A0A1B0GV72	72 aa		10.67	□□□□□ -0.7
NR1H3-231	ENST00000529540	MGP	P08493	103 aa		10.67	□□□□□ -0.7
NR1H3-231	ENST00000529540	UBE2D3	P61077	147 aa		10.67	□□□□□ -0.7
NR1H3-231	ENST00000529540	HERVK_113	P61574	105 aa		10.67	□□□□□ -0.7
NR1H3-231	ENST00000529540	UBE2D2	P62837	147 aa		10.67	□□□□□ -0.7
NR1H3-231	ENST00000529540	PLEKHB2	Q96CS7	222 aa		10.67	□□□□□ -0.7

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