RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 ERASQ7Z444 233 aa11.89□□□□□ -0.51
SNRNP35-204ENST00000527158 PCP2Q8IVA1 136 aa11.89□□□□□ -0.51
SNRNP35-204ENST00000527158 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.89□□□□□ -0.51
SNRNP35-204ENST00000527158 FAM110AQ9BQ89 295 aa11.89□□□□□ -0.51
SNRNP35-204ENST00000527158 PLNP26678 52 aa11.88□□□□□ -0.51
SNRNP35-204ENST00000527158 PPP1R17O96001 155 aa11.88□□□□□ -0.51
SNRNP35-204ENST00000527158 SMIM13P0DJ93 91 aa11.88□□□□□ -0.51
SNRNP35-204ENST00000527158 TAL2Q16559 108 aa11.88□□□□□ -0.51
SNRNP35-204ENST00000527158 BEAN1Q3B7T3 259 aa11.88□□□□□ -0.51
SNRNP35-204ENST00000527158 ORMDL2Q53FV1 153 aa11.88□□□□□ -0.51
SNRNP35-204ENST00000527158 TRPT1Q86TN4 253 aaKnown RBP11.88□□□□□ -0.51
SNRNP35-204ENST00000527158 LINC01587Q99440 93 aa11.88□□□□□ -0.51
SNRNP35-204ENST00000527158 C20orf78Q9BR46 151 aa11.88□□□□□ -0.51
SNRNP35-204ENST00000527158 TRAV12-1A0A0B4J245 112 aa11.87□□□□□ -0.51
SNRNP35-204ENST00000527158 KIF25-AS1Q9Y6Z4 181 aa11.87□□□□□ -0.51
SNRNP35-204ENST00000527158 A0A087WX48 190 aa11.86□□□□□ -0.51
SNRNP35-204ENST00000527158 POM121L12Q8N7R1 296 aa11.86□□□□□ -0.51
SNRNP35-204ENST00000527158 H3BUT2 72 aa11.86□□□□□ -0.51
SNRNP35-204ENST00000527158 ZNF876PQ49A33 203 aa11.86□□□□□ -0.51
SNRNP35-204ENST00000527158 LINC00467Q9BRT7 94 aa11.86□□□□□ -0.51
SNRNP35-204ENST00000527158 SMIM2Q9BVW6 85 aa11.86□□□□□ -0.51
SNRNP35-204ENST00000527158 JPT2Q9H910 190 aa11.86□□□□□ -0.51
SNRNP35-204ENST00000527158 XCL2Q9UBD3 114 aa11.86□□□□□ -0.51
SNRNP35-204ENST00000527158 CHAC1Q9BUX1 264 aa11.85□□□□□ -0.51
SNRNP35-204ENST00000527158 C2CD3Q4AC94 2353 aa11.85□□□□□ -0.51
SNRNP35-204ENST00000527158 MUC4Q99102 2169 aa11.85□□□□□ -0.51
SNRNP35-204ENST00000527158 A0A087WWL8 130 aa11.85□□□□□ -0.51
SNRNP35-204ENST00000527158 A0A1W2PPM0 123 aa11.85□□□□□ -0.51
SNRNP35-204ENST00000527158 LINC01549A6NIU2 74 aa11.85□□□□□ -0.51
SNRNP35-204ENST00000527158 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
SNRNP35-204ENST00000527158 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
SNRNP35-204ENST00000527158 RASL10AQ92737 203 aa11.85□□□□□ -0.51
SNRNP35-204ENST00000527158 F5H697 171 aa11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 FABP2P12104 132 aa11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 LINC00315P59091 139 aa11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 ZNF415Q09FC8 603 aa11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 CITED1Q99966 193 aa11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 TM2D2Q9BX73 214 aa11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 FLNBO75369 2602 aaKnown RBP11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 H7C1H1 209 aa11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 RNF151Q2KHN1 245 aa11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 FAM74A4Q5TZK3 123 aa11.84□□□□□ -0.51
SNRNP35-204ENST00000527158 INSL3P51460 131 aa11.83□□□□□ -0.52
SNRNP35-204ENST00000527158 VPS25Q9BRG1 176 aa11.83□□□□□ -0.52
SNRNP35-204ENST00000527158 TRBV25-1A0A075B6N4 114 aa11.82□□□□□ -0.52
SNRNP35-204ENST00000527158 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
SNRNP35-204ENST00000527158 RPL39LQ96EH5 51 aaKnown RBP11.82□□□□□ -0.52
SNRNP35-204ENST00000527158 C19orf73Q9NVV2 129 aa11.82□□□□□ -0.52
SNRNP35-204ENST00000527158 F8VRH5 84 aa11.82□□□□□ -0.52
SNRNP35-204ENST00000527158 GCSHP23434 173 aa11.82□□□□□ -0.52
SNRNP35-204ENST00000527158 GTSCR1Q86UQ5 136 aa11.82□□□□□ -0.52
SNRNP35-204ENST00000527158 TOMM6Q96B49 74 aa11.82□□□□□ -0.52
SNRNP35-204ENST00000527158 MRPL35Q9NZE8 188 aaKnown RBP11.82□□□□□ -0.52
SNRNP35-204ENST00000527158 SPCS1Q9Y6A9 102 aa11.82□□□□□ -0.52
SNRNP35-204ENST00000527158 M0R2P5 195 aa11.81□□□□□ -0.52
SNRNP35-204ENST00000527158 PRM2P04554 102 aa11.81□□□□□ -0.52
SNRNP35-204ENST00000527158 CRYGDP07320 174 aa11.81□□□□□ -0.52
SNRNP35-204ENST00000527158 C9orf66Q5T8R8 295 aa11.81□□□□□ -0.52
SNRNP35-204ENST00000527158 SAMD5Q5TGI4 173 aa11.81□□□□□ -0.52
SNRNP35-204ENST00000527158 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
SNRNP35-204ENST00000527158 CEND1Q8N111 149 aa11.81□□□□□ -0.52
SNRNP35-204ENST00000527158 WFDC10AQ9H1F0 79 aa11.81□□□□□ -0.52
SNRNP35-204ENST00000527158 IGHV3OR16-12A0A075B7B8 117 aa11.8□□□□□ -0.52
SNRNP35-204ENST00000527158 TCTAP57738 103 aa11.8□□□□□ -0.52
SNRNP35-204ENST00000527158 RPL32P62910 135 aaKnown RBP11.8□□□□□ -0.52
SNRNP35-204ENST00000527158 ZNF56Q15929 161 aa11.8□□□□□ -0.52
SNRNP35-204ENST00000527158 PIK3CD-AS1Q5SR53 167 aa11.8□□□□□ -0.52
SNRNP35-204ENST00000527158 C1orf158Q8N1D5 194 aa11.8□□□□□ -0.52
SNRNP35-204ENST00000527158 SPXQ9BT56 116 aa11.8□□□□□ -0.52
SNRNP35-204ENST00000527158 PTH2Q96A98 100 aa11.79□□□□□ -0.52
SNRNP35-204ENST00000527158 RPL35AP18077 110 aaKnown RBP11.79□□□□□ -0.52
SNRNP35-204ENST00000527158 COTL1Q14019 142 aa11.79□□□□□ -0.52
SNRNP35-204ENST00000527158 C11orf72Q8NBR9 251 aa11.79□□□□□ -0.52
SNRNP35-204ENST00000527158 RAB37Q96AX2 223 aa11.79□□□□□ -0.52
SNRNP35-204ENST00000527158 SCGB3A1Q96QR1 104 aa11.79□□□□□ -0.52
SNRNP35-204ENST00000527158 C1QTNF4Q9BXJ3 329 aa11.79□□□□□ -0.52
SNRNP35-204ENST00000527158 MORN3Q6PF18 240 aaPredicted RBP11.78□□□□□ -0.52
SNRNP35-204ENST00000527158 F8P00451 2351 aa11.78□□□□□ -0.52
SNRNP35-204ENST00000527158 A8MWV9 139 aa11.78□□□□□ -0.52
SNRNP35-204ENST00000527158 FXYD2P54710 66 aa11.78□□□□□ -0.52
SNRNP35-204ENST00000527158 CSTL1Q9H114 145 aa11.78□□□□□ -0.52
SNRNP35-204ENST00000527158 CHTOPQ9Y3Y2 248 aaKnown RBP11.78□□□□□ -0.52
SNRNP35-204ENST00000527158 NEGR1Q7Z3B1 354 aa11.77□□□□□ -0.53
SNRNP35-204ENST00000527158 NEXN-AS1Q8NBZ9 246 aa11.77□□□□□ -0.53
SNRNP35-204ENST00000527158 M0QY20 66 aa11.76□□□□□ -0.53
SNRNP35-204ENST00000527158 AZU1P20160 251 aa11.76□□□□□ -0.53
SNRNP35-204ENST00000527158 OR11H2Q8NH07 326 aa11.76□□□□□ -0.53
SNRNP35-204ENST00000527158 GIG44P09565 113 aaPredicted RBP11.75□□□□□ -0.53
SNRNP35-204ENST00000527158 PAPPA-AS1Q5QFB9 102 aa11.75□□□□□ -0.53
SNRNP35-204ENST00000527158 PHLDA1Q8WV24 401 aaPredicted RBP11.75□□□□□ -0.53
SNRNP35-204ENST00000527158 TRBV6-5A0A0K0K1A5 114 aa11.75□□□□□ -0.53
SNRNP35-204ENST00000527158 VCYO14598 125 aa11.75□□□□□ -0.53
SNRNP35-204ENST00000527158 C21orf62-AS1Q17RA5 79 aa11.75□□□□□ -0.53
SNRNP35-204ENST00000527158 G3V4G9 280 aa11.74□□□□□ -0.53
SNRNP35-204ENST00000527158 NIPBLQ6KC79 2804 aaeCLIP11.74□□□□□ -0.53
SNRNP35-204ENST00000527158 MYMXA0A1B0GTQ4 84 aa11.74□□□□□ -0.53
SNRNP35-204ENST00000527158 POLR2KP53803 58 aaKnown RBP11.74□□□□□ -0.53
SNRNP35-204ENST00000527158 C2orf66Q6UXQ4 117 aa11.74□□□□□ -0.53
SNRNP35-204ENST00000527158 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms