RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 TENM2Q9NT68 2774 aa11.47□□□□□ -0.57
CAPN1-205ENST00000526954 TRBV7-3A0A075B6L6 115 aa11.46□□□□□ -0.57
CAPN1-205ENST00000526954 TRAV26-2A0A0B4J265 109 aa11.46□□□□□ -0.57
CAPN1-205ENST00000526954 SRIP30626 198 aa11.46□□□□□ -0.57
CAPN1-205ENST00000526954 RPL36AP83881 106 aaKnown RBP11.46□□□□□ -0.57
CAPN1-205ENST00000526954 MRPL51Q4U2R6 128 aaKnown RBP11.46□□□□□ -0.57
CAPN1-205ENST00000526954 TMEM136Q6ZRR5 245 aa11.46□□□□□ -0.57
CAPN1-205ENST00000526954 NEGR1Q7Z3B1 354 aa11.46□□□□□ -0.57
CAPN1-205ENST00000526954 CBLN2Q8IUK8 224 aa11.46□□□□□ -0.57
CAPN1-205ENST00000526954 RPL36ALQ969Q0 106 aaKnown RBP11.46□□□□□ -0.57
CAPN1-205ENST00000526954 NIT2Q9NQR4 276 aa11.46□□□□□ -0.57
CAPN1-205ENST00000526954 PLECQ15149 4684 aaKnown RBP11.45□□□□□ -0.58
CAPN1-205ENST00000526954 TGIF2-C20orf24A0A0A6YYL0 155 aa11.45□□□□□ -0.58
CAPN1-205ENST00000526954 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
CAPN1-205ENST00000526954 GAGE1Q13065 139 aa11.45□□□□□ -0.58
CAPN1-205ENST00000526954 GAGE4Q13068 117 aa11.45□□□□□ -0.58
CAPN1-205ENST00000526954 GAGE5Q13069 117 aa11.45□□□□□ -0.58
CAPN1-205ENST00000526954 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
CAPN1-205ENST00000526954 GNB1LQ9BYB4 327 aa11.45□□□□□ -0.58
CAPN1-205ENST00000526954 HLA-DQA1P01909 254 aa11.44□□□□□ -0.58
CAPN1-205ENST00000526954 UBE2D3P61077 147 aa11.44□□□□□ -0.58
CAPN1-205ENST00000526954 UBE2D2P62837 147 aa11.44□□□□□ -0.58
CAPN1-205ENST00000526954 ZNRF2Q8NHG8 242 aa11.44□□□□□ -0.58
CAPN1-205ENST00000526954 PPBPP02775 128 aa11.43□□□□□ -0.58
CAPN1-205ENST00000526954 ATP6V0E2Q8NHE4 81 aa11.43□□□□□ -0.58
CAPN1-205ENST00000526954 TNFRSF18Q9Y5U5 241 aa11.43□□□□□ -0.58
CAPN1-205ENST00000526954 TRBV6-5A0A0K0K1A5 114 aa11.42□□□□□ -0.58
CAPN1-205ENST00000526954 GAS8-AS1O95177 125 aa11.42□□□□□ -0.58
CAPN1-205ENST00000526954 PPP1R17O96001 155 aa11.42□□□□□ -0.58
CAPN1-205ENST00000526954 MT-ND6P03923 174 aa11.42□□□□□ -0.58
CAPN1-205ENST00000526954 CKS2P33552 79 aa11.42□□□□□ -0.58
CAPN1-205ENST00000526954 TIRAPP58753 221 aa11.42□□□□□ -0.58
CAPN1-205ENST00000526954 RPL39LQ96EH5 51 aaKnown RBP11.42□□□□□ -0.58
CAPN1-205ENST00000526954 RPS10P46783 165 aaKnown RBP11.41□□□□□ -0.58
CAPN1-205ENST00000526954 ESRGQ1W209 222 aa11.41□□□□□ -0.58
CAPN1-205ENST00000526954 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
CAPN1-205ENST00000526954 LYPD5Q6UWN5 251 aa11.41□□□□□ -0.58
CAPN1-205ENST00000526954 NRACQ8N912 160 aa11.41□□□□□ -0.58
CAPN1-205ENST00000526954 GTSF1LQ9H1H1 148 aa11.41□□□□□ -0.58
CAPN1-205ENST00000526954 D6R8Y8 96 aa11.4□□□□□ -0.58
CAPN1-205ENST00000526954 SMKR1H3BMG3 65 aa11.4□□□□□ -0.58
CAPN1-205ENST00000526954 NCR2O95944 276 aa11.4□□□□□ -0.58
CAPN1-205ENST00000526954 APCSP02743 223 aa11.4□□□□□ -0.58
CAPN1-205ENST00000526954 CCL18P55774 89 aa11.4□□□□□ -0.58
CAPN1-205ENST00000526954 LGALS9CQ6DKI2 356 aa11.4□□□□□ -0.58
CAPN1-205ENST00000526954 DAZ4Q86SG3 579 aaKnown RBP11.4□□□□□ -0.58
CAPN1-205ENST00000526954 ORMDL3Q8N138 153 aa11.4□□□□□ -0.58
CAPN1-205ENST00000526954 DAZ3Q9NR90 486 aaKnown RBP11.4□□□□□ -0.58
CAPN1-205ENST00000526954 PHOX2AO14813 284 aa11.39□□□□□ -0.59
CAPN1-205ENST00000526954 SCO1O75880 301 aa11.39□□□□□ -0.59
CAPN1-205ENST00000526954 ST20Q9HBF5 79 aa11.39□□□□□ -0.59
CAPN1-205ENST00000526954 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-205ENST00000526954 C20orf78Q9BR46 151 aa11.38□□□□□ -0.59
CAPN1-205ENST00000526954 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
CAPN1-205ENST00000526954 LINC00588Q9Y4M8 146 aa11.38□□□□□ -0.59
CAPN1-205ENST00000526954 SDHAF1A6NFY7 115 aa11.37□□□□□ -0.59
CAPN1-205ENST00000526954 COLCA2A8K830 154 aa11.37□□□□□ -0.59
CAPN1-205ENST00000526954 TNFRSF6BO95407 300 aa11.37□□□□□ -0.59
CAPN1-205ENST00000526954 POLR2KP53803 58 aaKnown RBP11.37□□□□□ -0.59
CAPN1-205ENST00000526954 PRELID3AQ96N28 172 aa11.37□□□□□ -0.59
CAPN1-205ENST00000526954 MRPL18Q9H0U6 180 aaKnown RBP11.37□□□□□ -0.59
CAPN1-205ENST00000526954 MRPS16Q9Y3D3 137 aaKnown RBP11.37□□□□□ -0.59
CAPN1-205ENST00000526954 TRAPPC1Q9Y5R8 145 aa11.37□□□□□ -0.59
CAPN1-205ENST00000526954 NPYP01303 97 aa11.36□□□□□ -0.59
CAPN1-205ENST00000526954 SUMO2P61956 95 aaKnown RBP11.36□□□□□ -0.59
CAPN1-205ENST00000526954 RPL32P62910 135 aaKnown RBP11.36□□□□□ -0.59
CAPN1-205ENST00000526954 TMEM97Q5BJF2 176 aa11.36□□□□□ -0.59
CAPN1-205ENST00000526954 UPK3BQ9BT76 320 aa11.36□□□□□ -0.59
CAPN1-205ENST00000526954 TMEM70Q9BUB7 260 aa11.36□□□□□ -0.59
CAPN1-205ENST00000526954 IGHV3-38A0A0C4DH36 116 aa11.35□□□□□ -0.59
CAPN1-205ENST00000526954 TRBV27A0A0K0K1C4 114 aa11.35□□□□□ -0.59
CAPN1-205ENST00000526954 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
CAPN1-205ENST00000526954 FABP9Q0Z7S8 132 aa11.35□□□□□ -0.59
CAPN1-205ENST00000526954 KIAA1644Q3SXP7 199 aa11.35□□□□□ -0.59
CAPN1-205ENST00000526954 LELP1Q5T871 98 aa11.35□□□□□ -0.59
CAPN1-205ENST00000526954 LINC00476Q8WZB0 136 aa11.35□□□□□ -0.59
CAPN1-205ENST00000526954 VPS13DQ5THJ4 4388 aa11.34□□□□□ -0.59
CAPN1-205ENST00000526954 VCYO14598 125 aa11.34□□□□□ -0.59
CAPN1-205ENST00000526954 UBE2DNLQ8IWF7 75 aa11.34□□□□□ -0.59
CAPN1-205ENST00000526954 TRBV6-8A0A0A6YYG3 113 aa11.33□□□□□ -0.6
CAPN1-205ENST00000526954 I3L3M4 83 aa11.33□□□□□ -0.6
CAPN1-205ENST00000526954 NTM-AS1Q6ZSK4 140 aa11.33□□□□□ -0.6
CAPN1-205ENST00000526954 ALKBH7Q9BT30 221 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-205ENST00000526954 RAB5AP20339 215 aa11.32□□□□□ -0.6
CAPN1-205ENST00000526954 PMCHP20382 165 aa11.32□□□□□ -0.6
CAPN1-205ENST00000526954 COTL1Q14019 142 aa11.32□□□□□ -0.6
CAPN1-205ENST00000526954 ALMS1Q8TCU4 4167 aa11.32□□□□□ -0.6
CAPN1-205ENST00000526954 DNAH1Q9P2D7 4330 aa11.31□□□□□ -0.6
CAPN1-205ENST00000526954 TRAV8-6A0A0B4J262 113 aa11.31□□□□□ -0.6
CAPN1-205ENST00000526954 LY6G6CO95867 125 aa11.31□□□□□ -0.6
CAPN1-205ENST00000526954 IQCJQ1A5X6 159 aa11.31□□□□□ -0.6
CAPN1-205ENST00000526954 SMIM2Q9BVW6 85 aa11.31□□□□□ -0.6
CAPN1-205ENST00000526954 LCE6AA0A183 80 aa11.3□□□□□ -0.6
CAPN1-205ENST00000526954 MAP1LC3AQ9H492 121 aa11.3□□□□□ -0.6
CAPN1-205ENST00000526954 LYSTQ99698 3801 aa11.3□□□□□ -0.6
CAPN1-205ENST00000526954 IGLV2-18A0A075B6J9 118 aa11.29□□□□□ -0.6
CAPN1-205ENST00000526954 TRBV25-1A0A075B6N4 114 aa11.29□□□□□ -0.6
CAPN1-205ENST00000526954 IGHV1-24A0A0C4DH33 117 aa11.29□□□□□ -0.6
CAPN1-205ENST00000526954 TCAPO15273 167 aa11.29□□□□□ -0.6
CAPN1-205ENST00000526954 TSHBP01222 138 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms