RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 ODF3BA8MYP8 253 aa8.45□□□□□ -1.06
VPS11-202ENST00000526829 P0DMU3 169 aa8.45□□□□□ -1.06
VPS11-202ENST00000526829 FAM231AP0DMU4 169 aa8.45□□□□□ -1.06
VPS11-202ENST00000526829 FAM231CP0DMU5 169 aa8.45□□□□□ -1.06
VPS11-202ENST00000526829 CD28P10747 220 aa8.45□□□□□ -1.06
VPS11-202ENST00000526829 C17orf58Q2M2W7 97 aa8.45□□□□□ -1.06
VPS11-202ENST00000526829 Q8N2B8 174 aa8.45□□□□□ -1.06
VPS11-202ENST00000526829 MYOZ3Q8TDC0 251 aa8.45□□□□□ -1.06
VPS11-202ENST00000526829 NOTCH3Q9UM47 2321 aa8.45□□□□□ -1.06
VPS11-202ENST00000526829 ZNF493Q6ZR52 646 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 Q86TA4 180 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 DYNAPQ8N1N2 210 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 LINC01561Q8N1V8 128 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 NPIPB3Q92617 1050 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 EPM2AB3EWF7 344 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 SUB1P53999 127 aaKnown RBP eCLIP8.44□□□□□ -1.06
VPS11-202ENST00000526829 FXYD2P54710 66 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 CACNG7P62955 275 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 POM121L12Q8N7R1 296 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 ZNF414Q96IQ9 312 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 ODF3Q96PU9 254 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 U3KQK5 164 aa8.44□□□□□ -1.06
VPS11-202ENST00000526829 DSCAML1Q8TD84 2053 aa8.43□□□□□ -1.06
VPS11-202ENST00000526829 A8MWV9 139 aa8.43□□□□□ -1.06
VPS11-202ENST00000526829 PRB2P02812 416 aaPredicted RBP8.43□□□□□ -1.06
VPS11-202ENST00000526829 SAA1P0DJI8 122 aaPredicted RBP8.43□□□□□ -1.06
VPS11-202ENST00000526829 TMEM30BQ3MIR4 351 aa8.43□□□□□ -1.06
VPS11-202ENST00000526829 VMA21Q3ZAQ7 101 aa8.43□□□□□ -1.06
VPS11-202ENST00000526829 LINC00311Q8N616 119 aa8.43□□□□□ -1.06
VPS11-202ENST00000526829 LEAP2Q969E1 77 aa8.43□□□□□ -1.06
VPS11-202ENST00000526829 Q9H3A6 140 aa8.43□□□□□ -1.06
VPS11-202ENST00000526829 OTORQ9NRC9 128 aa8.43□□□□□ -1.06
VPS11-202ENST00000526829 DPM3Q9P2X0 92 aa8.43□□□□□ -1.06
VPS11-202ENST00000526829 ADARB2-AS1A8MUL3 147 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 HBDP02042 147 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 IGF1P05019 195 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 ARMS2P0C7Q2 107 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 VPREB1P12018 145 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 GATA1P15976 413 aaPredicted RBP8.42□□□□□ -1.06
VPS11-202ENST00000526829 IFI27P40305 119 aaPredicted RBP8.42□□□□□ -1.06
VPS11-202ENST00000526829 PCP2Q8IVA1 136 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 AMN1Q8IY45 258 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 IFI27L1Q96BM0 104 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 SHANK2-AS3Q9BTD1 123 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 Q9UF83 564 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 F11RQ9Y624 299 aaKnown RBP8.42□□□□□ -1.06
VPS11-202ENST00000526829 TRAV2A0A0B4J234 112 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 TRAV8-2A0A0B4J237 113 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 A0A0U1RQV1 116 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 GP9P14770 177 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
VPS11-202ENST00000526829 TRAV26-2A0A0B4J265 109 aa8.41□□□□□ -1.06
VPS11-202ENST00000526829 BLCAPP62952 87 aa8.41□□□□□ -1.06
VPS11-202ENST00000526829 SRSF12Q8WXF0 261 aaKnown RBP8.41□□□□□ -1.06
VPS11-202ENST00000526829 TRGV9Q99603 122 aa8.41□□□□□ -1.06
VPS11-202ENST00000526829 H3BS24 57 aa8.41□□□□□ -1.06
VPS11-202ENST00000526829 K7ERJ3 54 aa8.41□□□□□ -1.06
VPS11-202ENST00000526829 IGLV2-11P01706 119 aa8.41□□□□□ -1.06
VPS11-202ENST00000526829 IGKV1-16P04430 117 aa8.41□□□□□ -1.06
VPS11-202ENST00000526829 SCGB1C2P0DMR2 95 aa8.41□□□□□ -1.06
VPS11-202ENST00000526829 LINC00574Q9H8X3 128 aa8.41□□□□□ -1.06
VPS11-202ENST00000526829 NHP2Q9NX24 153 aaKnown RBP8.41□□□□□ -1.06
VPS11-202ENST00000526829 TMEM167AQ8TBQ9 72 aa8.4□□□□□ -1.06
VPS11-202ENST00000526829 CHAC1Q9BUX1 264 aa8.4□□□□□ -1.06
VPS11-202ENST00000526829 TRAV8-1A0A0A6YYK1 113 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 IGKCP01834 107 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 C12orf74Q32Q52 190 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 MRPL55Q7Z7F7 128 aaKnown RBP8.39□□□□□ -1.07
VPS11-202ENST00000526829 PRNTQ86SH4 94 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 ORMDL3Q8N138 153 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 RITA1Q96K30 269 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 DSCR8Q96T75 97 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 TMEM14CQ9P0S9 112 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 D6R8Y8 96 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 WT1-ASQ06250 92 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 FAM104BQ5XKR9 115 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 Q6ZS46 218 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 ZNF833PQ6ZTB9 187 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 TMEM75Q8N9X5 138 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 WFDC9Q8NEX5 89 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 MRPL36Q9P0J6 103 aaKnown RBP8.39□□□□□ -1.07
VPS11-202ENST00000526829 HHLA3Q9XRX5 114 aa8.39□□□□□ -1.07
VPS11-202ENST00000526829 TRAV12-2A0A075B6T6 113 aa8.38□□□□□ -1.07
VPS11-202ENST00000526829 TRAV8-4A0A0B4J246 113 aa8.38□□□□□ -1.07
VPS11-202ENST00000526829 LOC389332A0A1B0GUA5 103 aa8.38□□□□□ -1.07
VPS11-202ENST00000526829 PVRIGQ6DKI7 326 aa8.38□□□□□ -1.07
VPS11-202ENST00000526829 TNCP24821 2201 aa8.38□□□□□ -1.07
VPS11-202ENST00000526829 DKK2Q9UBU2 259 aa8.37□□□□□ -1.07
VPS11-202ENST00000526829 DNAH9Q9NYC9 4486 aa8.37□□□□□ -1.07
VPS11-202ENST00000526829 FAM240AA0A1B0GVK7 77 aa8.37□□□□□ -1.07
VPS11-202ENST00000526829 WI2-2373I1.2A0A1W2PRP0 233 aa8.37□□□□□ -1.07
VPS11-202ENST00000526829 LINC01546A6NGU7 62 aa8.37□□□□□ -1.07
VPS11-202ENST00000526829 USP17L23D6RBM5 183 aa8.37□□□□□ -1.07
VPS11-202ENST00000526829 E7EUB6 86 aa8.37□□□□□ -1.07
VPS11-202ENST00000526829 BUB1B-PAK6H3BSN5 160 aa8.37□□□□□ -1.07
VPS11-202ENST00000526829 DEFB121Q5J5C9 76 aa8.37□□□□□ -1.07
VPS11-202ENST00000526829 TRBV25-1A0A075B6N4 114 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms