RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 OR5AK2Q8NH90 309 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 OR10J5Q8NHC4 309 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 CANT1Q8WVQ1 401 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 GPER1Q99527 375 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 SLC25A21Q9BQT8 299 aaPredicted RBP1.76□□□□□ -2.13
CD44-223ENST00000526553 GGACTQ9BVM4 153 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 IMUPQ9GZP8 106 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 ATG5Q9H1Y0 275 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 TAF9BQ9HBM6 251 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 OSTCQ9NRP0 149 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 TMEM242Q9NWH2 141 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 CCDC167Q9P0B6 97 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 ABRACLQ9P1F3 81 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 RABAC1Q9UI14 185 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 FREM1Q5H8C1 2179 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 CMYA5Q8N3K9 4069 aa1.76□□□□□ -2.13
CD44-223ENST00000526553 MALRD1Q5VYJ5 2156 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 TGP01266 2768 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 TRAV30A0A087WSZ9 112 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 A0A087WWC5 75 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 LINC00587B1AMM8 73 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 ZNF670-ZNF695F2Z2N8 137 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 M0R2Z0 102 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 PMP2P02689 132 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 CLPSP04118 112 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 LSM3P62310 102 aaKnown RBP1.75□□□□□ -2.13
CD44-223ENST00000526553 PSPHP78330 225 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 ADIRFQ15847 76 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 PMCHL1Q16048 86 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 SMIM21Q3B7S5 101 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 LINC01554Q52M75 96 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 KHDC3LQ587J8 217 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 TMEM244Q5VVB8 128 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 TOMM20LQ6UXN7 152 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 LYG2Q86SG7 212 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 C9orf62Q8N4C0 152 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 OR4D11Q8NGI4 311 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 COPS9Q8WXC6 57 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 TP53RKQ96S44 253 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 LYSMD1Q96S90 227 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 PMCHL2Q9BQD1 86 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 CST11Q9H112 138 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 NHP2Q9NX24 153 aaKnown RBP1.75□□□□□ -2.13
CD44-223ENST00000526553 TRAPPC2LQ9UL33 140 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 NOP16Q9Y3C1 178 aaKnown RBP1.75□□□□□ -2.13
CD44-223ENST00000526553 RNF11Q9Y3C5 154 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 CUBNO60494 3623 aa1.75□□□□□ -2.13
CD44-223ENST00000526553 CADP27708 2225 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 A0A1B0GV90 55 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 C9orf170A2RU37 121 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 IFITM5A6NNB3 132 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 UMAD1C9J7I0 102 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 TMEM238C9JI98 176 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 TMEM262E9PQX1 116 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 UBL3O95164 117 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 STATHP02808 62 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 GPX1P07203 203 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 ZNF705BP0CI00 300 aaPredicted RBP1.74□□□□□ -2.13
CD44-223ENST00000526553 AKR1C3P42330 323 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 POLR2HP52434 150 aaKnown RBP1.74□□□□□ -2.13
CD44-223ENST00000526553 POLR2JP52435 117 aaKnown RBP1.74□□□□□ -2.13
CD44-223ENST00000526553 NDUFA6P56556 154 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 TPPP2P59282 170 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 S100A10P60903 97 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 TFF3Q07654 80 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 ELOBQ15370 118 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 TMEM155Q4W5P6 130 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 SAMD13Q5VXD3 122 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 NCBP2-AS2Q69YL0 99 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 LCN15Q6UWW0 184 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 OR4B1Q8NGF8 309 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 OR5A1Q8NGJ0 315 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 OR8D4Q8NGM9 314 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 OR13C6PQ8NH95 151 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 STAG3L4Q8TBR4 150 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 MBD3L1Q8WWY6 194 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 C14orf144Q96I85 54 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 CIB3Q96Q77 187 aaPredicted RBP1.74□□□□□ -2.13
CD44-223ENST00000526553 CCL19Q99731 98 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 PSMG3Q9BT73 122 aaPredicted RBP1.74□□□□□ -2.13
CD44-223ENST00000526553 LRTM1Q9HBL6 345 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 POPDC3Q9HBV1 291 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 COMMD3Q9UBI1 195 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 UQCR10Q9UDW1 63 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 LAMTOR3Q9UHA4 124 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 EPDR1Q9UM22 224 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 SLC35A3Q9Y2D2 325 aa1.74□□□□□ -2.13
CD44-223ENST00000526553 PKD1L1Q8TDX9 2849 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 NOTCH1P46531 2555 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 FXYD6-FXYD2A0A087WZ82 144 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 TRDV1A0A1B0GX56 115 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 C7orf71A4D174 169 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 MAP1LC3B2A6NCE7 125 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 PRORSD1PA6NEY8 169 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 IBA57-AS1B1ANH7 110 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 MCRIP1C9JLW8 97 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 H0YGG7 62 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 H7BYZ3 331 aa1.73□□□□□ -2.13
CD44-223ENST00000526553 CCL22O00626 93 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms