RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 NMSQ5H8A3 153 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 C10orf113Q5VZT2 155 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 XAF1Q6GPH4 301 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 SSBP3-AS1Q7Z2R9 100 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 LINC00643Q86TS7 51 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 ZNF625Q96I27 306 aaPredicted RBP0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 LINC00208Q96KT6 92 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 OBSCN-AS1Q96MR7 158 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 CCL19Q99731 98 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 NDUFA4L2Q9NRX3 87 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 PSENENQ9NZ42 101 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 HILPDAQ9Y5L2 63 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 LENEPQ9Y5L5 61 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 TRPM3Q9HCF6 1732 aaPredicted RBP0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 SIPA1L1O43166 1804 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 PLIN4Q96Q06 1357 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 CACNA1SQ13698 1873 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 CEP162Q5TB80 1403 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 IQSEC2Q5JU85 1478 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 IFT140Q96RY7 1462 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 ZNF638Q14966 1978 aaKnown RBP0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 CHD5Q8TDI0 1954 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 ADGRB3O60242 1522 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 MAPKBP1O60336 1514 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 RB1CC1Q8TDY2 1594 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 MYO9BQ13459 2157 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 NALCNQ8IZF0 1738 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 NUP210Q8TEM1 1887 aaPredicted RBP0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 ZNF106Q9H2Y7 1883 aaKnown RBP0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 A0A087WSZ3 146 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 TRAV22A0A0B4J277 110 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 MYMXA0A1B0GTQ4 84 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 A0A1B0GUT8 65 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 TMEM14DPA8MWL7 114 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 UQCR11O14957 56 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 CFDP00746 253 aaPredicted RBP0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 IGLV3-1P01715 115 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 IGHV3-30P01768 117 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 ANGP03950 147 aaKnown RBP0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 HMGN2P05204 90 aaKnown RBP0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 SAA2P0DJI9 122 aaPredicted RBP0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 IGHV3-30-5P0DP03 117 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 UBE2D1P51668 147 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 FXYD6P3P58550 94 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 TDRG1Q3Y452 100 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 PCOTHQ58A44 107 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 BVES-AS1Q5T3Y7 98 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 Q6JHZ5 121 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 NDUFA11Q86Y39 141 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 Q8N2B8 174 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 C9orf163Q8N9P6 203 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 ZNF563Q8TA94 476 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 GAFA1Q96PS6 74 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 TMEM14BQ9NUH8 114 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 HIGD1BQ9P298 99 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 C22orf24Q9Y442 160 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 TIMM8BQ9Y5J9 83 aaPredicted RBP0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 DOCK4Q8N1I0 1966 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 ABCC5O15440 1437 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 CLIP1P30622 1438 aa0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 TROQ12816 1431 aaPredicted RBP0.53□□□□□ -2.32
ECHDC1-219ENST00000526299 MLH3Q9UHC1 1453 aa0.53□□□□□ -2.33
ECHDC1-219ENST00000526299 SLIT2O94813 1529 aa0.53□□□□□ -2.33
ECHDC1-219ENST00000526299 LRP5O75197 1615 aa0.53□□□□□ -2.33
ECHDC1-219ENST00000526299 ZCCHC11Q5TAX3 1644 aaKnown RBP0.53□□□□□ -2.33
ECHDC1-219ENST00000526299 ARAP2Q8WZ64 1704 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 CDK5RAP2Q96SN8 1893 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 MYH3P11055 1940 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 TICRRQ7Z2Z1 1910 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 SCN8AQ9UQD0 1980 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 DOCK6Q96HP0 2047 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 ATG2BQ96BY7 2078 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 TRBV25-1A0A075B6N4 114 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 A0A0J9YY99 117 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 TRBV7-7A0A0K0K1E9 115 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 CXorf51AA0A1B0GTR3 108 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 A0A1B0GU69 56 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 LY6G6CO95867 125 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 PRH1P02810 166 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 SFTA3P0C7M3 94 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 IGLC2P0DOY2 106 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 IGLC3P0DOY3 106 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 CCL3L1P16619 93 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 PDE6GP18545 87 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 IFI27P40305 119 aaPredicted RBP0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 ATXN8Q156A1 80 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 HEPN1Q6WQI6 88 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 UBE2DNLQ8IWF7 75 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 C5orf56Q8N8D9 126 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 FAM167A-AS1Q96KT0 104 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 ODF3Q96PU9 254 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 RRBP1Q9P2E9 1410 aaKnown RBP0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 POLA1P09884 1462 aaPredicted RBP0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 NLRP1Q9C000 1473 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 ZFYVE16Q7Z3T8 1539 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 GLI3P10071 1580 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 TTC37Q6PGP7 1564 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 KDM5AP29375 1690 aaKnown RBP0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 CUL7Q14999 1698 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms