RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 BTN1A1Q13410 526 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 OR10J3Q5JRS4 329 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 FAM162BQ5T6X4 162 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 FAM19A1Q7Z5A9 133 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 Q86TA4 180 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 SBSPONQ8IVN8 264 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 TMEM256Q8N2U0 113 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 CSNK1G2-AS1Q8NCQ2 148 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 ZC2HC1AQ96GY0 325 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 RCHY1Q96PM5 261 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 CHCHD5Q9BSY4 110 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 TMEM208Q9BTX3 173 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 SEC11CQ9BY50 192 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 NAT8Q9UHE5 227 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 LY96Q9Y6Y9 160 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 ANK2Q01484 3957 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 TRBV20OR9-2A0A075B6H5 130 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 IGLV4-3A0A075B6K6 122 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 SMIM9A6NGZ8 99 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 KRBOX1C9JBD0 128 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 H7BYZ3 331 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 GNRH2O43555 120 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 SH2D1AO60880 128 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 IGLV2-8P01709 118 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 RPL23P62829 140 aaKnown RBP3.16□□□□□ -1.9
USP48-211ENST00000526044 ADIRFQ15847 76 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 DEFB135Q30KP9 77 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 MUC21Q5SSG8 566 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 PRR9Q5T870 116 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 Q6AWC8 147 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 Q6ZQT7 251 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 LINC01551Q86U37 167 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 C1orf158Q8N1D5 194 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 POM121L12Q8N7R1 296 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 OR11H2Q8NH07 326 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 KCNS1Q96KK3 526 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 TP53TG1Q9Y2A0 90 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 VWFP04275 2813 aa3.16□□□□□ -1.9
USP48-211ENST00000526044 IGHV1OR15-1A0A075B7D0 117 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 IGHV3-38A0A0C4DH36 116 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 TMEM189A5PLL7 270 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 C19orf71A6NCJ1 209 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 ZNF705GA8MUZ8 300 aaPredicted RBP3.15□□□□□ -1.91
USP48-211ENST00000526044 B4DEV8 164 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 M0R036 132 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 P01737 135 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 PRM2P04554 102 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 RBMY1A1P0DJD3 496 aaKnown RBP3.15□□□□□ -1.91
USP48-211ENST00000526044 RBMY1CP0DJD4 496 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 AZU1P20160 251 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 RPS20P60866 119 aaKnown RBP3.15□□□□□ -1.91
USP48-211ENST00000526044 RBMY1FQ15415 496 aaKnown RBP3.15□□□□□ -1.91
USP48-211ENST00000526044 RRN3P1Q2M238 152 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 C10orf91Q5T1B1 145 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 IBA57Q5T440 356 aaKnown RBP3.15□□□□□ -1.91
USP48-211ENST00000526044 ZNF705AQ6ZN79 300 aaPredicted RBP3.15□□□□□ -1.91
USP48-211ENST00000526044 FAM231DQ6ZW35 169 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 OR2D3Q8NGH3 330 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 B9D2Q9BPU9 175 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 LINC00467Q9BRT7 94 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 RNASE7Q9H1E1 156 aaKnown RBP3.15□□□□□ -1.91
USP48-211ENST00000526044 OSTCQ9NRP0 149 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 Q9UF83 564 aa3.15□□□□□ -1.91
USP48-211ENST00000526044 PKD1L1Q8TDX9 2849 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 DNHD1Q96M86 4753 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 TMSB15BA0A087X1C1 80 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 GRIFINA4D1Z8 144 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 A8MWL6 223 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 SNAPINO95295 136 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 APOC3P02656 99 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 MT-ND4LP03901 98 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 TYMSP04818 313 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 MIFP14174 115 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 ADCYAP1P18509 176 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 S100A4P26447 101 aaKnown RBP3.14□□□□□ -1.91
USP48-211ENST00000526044 TDRG1Q3Y452 100 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 HIGD2BQ4VC39 106 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 PDZD11Q5EBL8 140 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 ZNF493Q6ZR52 646 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 MTURNQ8N3F0 131 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 C16orf74Q96GX8 76 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 SFRP2Q96HF1 295 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 TM2D3Q9BRN9 247 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 RPP21Q9H633 154 aaKnown RBP3.14□□□□□ -1.91
USP48-211ENST00000526044 TP53TG3Q9ULZ0 132 aa3.14□□□□□ -1.91
USP48-211ENST00000526044 CARHSP1Q9Y2V2 147 aaKnown RBP3.14□□□□□ -1.91
USP48-211ENST00000526044 IGHV3-16A0A0C4DH30 117 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 C7orf77A4D0Y5 90 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 F2Z2F3 143 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 DEFB4AO15263 64 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 CXCL1P09341 107 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 ARMS2P0C7Q2 107 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 GZMBP10144 247 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 ASIPP42127 132 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 EMP1P54849 157 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 RPL19P84098 196 aaKnown RBP3.13□□□□□ -1.91
USP48-211ENST00000526044 RNF212Q495C1 297 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 DNLZQ5SXM8 178 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 SMIM15Q7Z3B0 74 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 SVBPQ8N300 66 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms