RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ZNF816Q0VGE8 651 aaPredicted RBP2.84□□□□□ -1.95
CD44-213ENST00000525209 NNATQ16517 81 aa2.84□□□□□ -1.95
CD44-213ENST00000525209 Q8NAQ8 132 aa2.84□□□□□ -1.95
CD44-213ENST00000525209 ST20-AS1Q8NBB2 130 aa2.84□□□□□ -1.95
CD44-213ENST00000525209 Q96M85 177 aa2.84□□□□□ -1.95
CD44-213ENST00000525209 REG4Q9BYZ8 158 aa2.84□□□□□ -1.95
CD44-213ENST00000525209 CHD3Q12873 2000 aaKnown RBP2.84□□□□□ -1.95
CD44-213ENST00000525209 GCN1Q92616 2671 aaKnown RBP2.84□□□□□ -1.96
CD44-213ENST00000525209 CACNA1EQ15878 2313 aa2.84□□□□□ -1.96
CD44-213ENST00000525209 IGF2RP11717 2491 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 CACNA1DQ01668 2161 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 SETXQ7Z333 2677 aaKnown RBP2.83□□□□□ -1.96
CD44-213ENST00000525209 TRAV3A0A0B4J244 114 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 TRAV1-1A0A0B4J248 108 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 A0A1B0GU33 70 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 UBE2L5PA0A1B0GUS4 154 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 C11orf86A6NJI1 115 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 ZNF705FA8MVS1 300 aaPredicted RBP2.83□□□□□ -1.96
CD44-213ENST00000525209 M0R233 179 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 ZNF861PO60384 105 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 NMBP08949 121 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 SNCAP37840 140 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 UBE2L3P68036 154 aaKnown RBP2.83□□□□□ -1.96
CD44-213ENST00000525209 TDRG1Q3Y452 100 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 LGALSLQ3ZCW2 172 aaPredicted RBP2.83□□□□□ -1.96
CD44-213ENST00000525209 C5orf38Q86SI9 138 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 KLF14Q8TD94 323 aaPredicted RBP2.83□□□□□ -1.96
CD44-213ENST00000525209 S100A13Q99584 98 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 CXCL16Q9H2A7 254 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 CCL26Q9Y258 94 aa2.83□□□□□ -1.96
CD44-213ENST00000525209 NBEAQ8NFP9 2946 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 COL5A1P20908 1838 aaPredicted RBP2.82□□□□□ -1.96
CD44-213ENST00000525209 ARHGAP21Q5T5U3 1957 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 TNRC6AQ8NDV7 1962 aaKnown RBP2.82□□□□□ -1.96
CD44-213ENST00000525209 KRTAP29-1A8MX34 341 aaPredicted RBP2.82□□□□□ -1.96
CD44-213ENST00000525209 F8W1H4 67 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 GNGT2O14610 69 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 GYPAP02724 150 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 CRPP02741 224 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 CISD3P0C7P0 127 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 INSL4Q14641 139 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 C1orf134Q5TEV5 83 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 ALKAL2Q6UX46 152 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 FAM19A2Q8N3H0 131 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 C14orf132Q9NPU4 83 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 KNTC1P50748 2209 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 COL6A6A6NMZ7 2263 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 DOPEY2Q9Y3R5 2298 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 ZFYVE26Q68DK2 2539 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 AKAP13Q12802 2813 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 DSPP15924 2871 aaKnown RBP2.82□□□□□ -1.96
CD44-213ENST00000525209 MUC22E2RYF6 1773 aaPredicted RBP2.82□□□□□ -1.96
CD44-213ENST00000525209 LAMA1P25391 3075 aa2.82□□□□□ -1.96
CD44-213ENST00000525209 COL27A1Q8IZC6 1860 aaPredicted RBP2.82□□□□□ -1.96
CD44-213ENST00000525209 ASPMQ8IZT6 3477 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 IGHV1-18A0A0C4DH31 117 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 PIRTP0C851 137 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 CXCL8P10145 99 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 SLC25A6P12236 298 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 PIPP12273 146 aaPredicted RBP2.81□□□□□ -1.96
CD44-213ENST00000525209 KRTAP10-9P60411 292 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 RPL26P61254 145 aaKnown RBP2.81□□□□□ -1.96
CD44-213ENST00000525209 EIF4EBP1Q13541 118 aaPredicted RBP2.81□□□□□ -1.96
CD44-213ENST00000525209 Q5BKY6 102 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 LINC00269Q8N2A0 174 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 LINC00301Q8NCQ3 95 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 SMIM7Q9BQ49 75 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 UQCR10Q9UDW1 63 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 PTPRDP23468 1912 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 NAV2Q8IVL1 2488 aa2.81□□□□□ -1.96
CD44-213ENST00000525209 FLNBO75369 2602 aaKnown RBP2.81□□□□□ -1.96
CD44-213ENST00000525209 MALRD1Q5VYJ5 2156 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 TSC2P49815 1807 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 KIAA1549LQ6ZVL6 1849 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 TNRC6BQ9UPQ9 1833 aaKnown RBP2.8□□□□□ -1.96
CD44-213ENST00000525209 IGKV1D-42A0A075B6H8 117 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 IGLC7A0M8Q6 106 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 UBL3O95164 117 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 SFT2D2O95562 160 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 CYB5AP00167 134 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 IL4P05112 153 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 SSR2P43308 183 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 LINC00299Q6ZSB3 139 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 SLC25A26Q70HW3 274 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 LYPD6Q86Y78 171 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 C15orf53Q8NAA6 179 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 C20orf166-AS1Q96NR2 134 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 PMCHL2Q9BQD1 86 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 MINOS1-NBL1R4GNA1 71 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 KNL1Q8NG31 2342 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 NUMA1Q14980 2115 aa2.8□□□□□ -1.96
CD44-213ENST00000525209 CEP295Q9C0D2 2601 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 ZFHX4Q86UP3 3567 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 IGLV4-69A0A075B6H9 119 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 A0A087WYN8 130 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 LOC107984156A0A0G2JMH3 177 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 TRBV7-7A0A0K0K1E9 115 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 IBA57-AS1B1ANH7 110 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 WISP3O95389 354 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms