RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 SHANK2-AS3Q9BTD1 123 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 OTORQ9NRC9 128 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 U3KQK5 164 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 HLA-DRB4X5D2U9 266 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 LAMA1P25391 3075 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 OTOGLQ3ZCN5 2332 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 TRAV5A0A0B4J249 113 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 OR2T8A6NH00 312 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 IGLL5B9A064 214 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 K7EP34 96 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 IGKV1-17P01599 117 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 IGKV1-16P04430 117 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 TCRAP04437 139 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 SLC25A5P05141 298 aaKnown RBP3.13□□□□□ -1.91
SKP1-213ENST00000524288 NBEAP1P0C6P0 100 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 SMIM17P0DL12 118 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 GLRXP35754 106 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 ERHP84090 104 aaKnown RBP3.13□□□□□ -1.91
SKP1-213ENST00000524288 WT1-ASQ06250 92 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 HSD52Q0P140 79 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 LTC4SQ16873 150 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 LINC00322Q6ZN03 302 aaPredicted RBP3.13□□□□□ -1.91
SKP1-213ENST00000524288 LYPD1Q8N2G4 141 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 RPRMLQ8N4K4 120 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 TMEM75Q8N9X5 138 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 OR4X2Q8NGF9 303 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 OR5A1Q8NGJ0 315 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 WASHC3Q9Y3C0 194 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 FAM186AA6NE01 2351 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 NCOR1O75376 2440 aa3.13□□□□□ -1.91
SKP1-213ENST00000524288 MALRD1Q5VYJ5 2156 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 WDR87Q6ZQQ6 2873 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 AHCTF1Q8WYP5 2266 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 PLCE1Q9P212 2302 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 IGHV3OR15-7A0A075B7D8 119 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.12□□□□□ -1.91
SKP1-213ENST00000524288 A0A1B0GUT8 65 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 hADV38S2A0JD32 116 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 C7orf71A4D174 169 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 C8orf87E5RJ46 101 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 J3QLI3 93 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 IGHG2P01859 326 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 SCGB1A1P11684 91 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 CSN1S1P47710 185 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 DLX6P56179 175 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 GNG5P63218 68 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 VMA21Q3ZAQ7 101 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 SPRNQ5BIV9 151 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 TMEM97Q5BJF2 176 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 TIMM23BQ5SRD1 257 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 AMMECR1LQ6DCA0 310 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 GTF2H5Q6ZYL4 71 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 LINC00305Q7Z4B0 112 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 ADM2Q7Z4H4 148 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 FAM19A3Q7Z5A8 133 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 BPIFA4PQ86YQ2 179 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 C1orf64Q8NEQ6 169 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 OR10AG1Q8NH19 301 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 MRPL36Q9P0J6 103 aaKnown RBP3.12□□□□□ -1.91
SKP1-213ENST00000524288 HIGD1BQ9P298 99 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 ICOSQ9Y6W8 199 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 KNTC1P50748 2209 aa3.12□□□□□ -1.91
SKP1-213ENST00000524288 TRIOO75962 3097 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 TMEM189A5PLL7 270 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 H3BRN7 92 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 K7ERS5 55 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 PDE6HQ13956 83 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 FAM216BQ8N7L0 139 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 FER1L6-AS1Q8NA97 138 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 LEAP2Q969E1 77 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 VPS25Q9BRG1 176 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 CNFNQ9BYD5 112 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 TP73-AS1Q9UF72 201 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 HIGD1AQ9Y241 93 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 PTPRZ1P23471 2315 aaPredicted RBP3.11□□□□□ -1.91
SKP1-213ENST00000524288 TTC28Q96AY4 2481 aa3.11□□□□□ -1.91
SKP1-213ENST00000524288 TRBV19A0A075B6N1 114 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 A0A1W2PPM0 123 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 TMEM238C9JI98 176 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 E7EUB6 86 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 NCR2O95944 276 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 HBDP02042 147 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 RBP4P02753 201 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 ARMS2P0C7Q2 107 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 RPL27AP46776 148 aaKnown RBP3.1□□□□□ -1.91
SKP1-213ENST00000524288 TNFAIP6P98066 277 aaPredicted RBP3.1□□□□□ -1.91
SKP1-213ENST00000524288 TMEM155Q4W5P6 130 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 CNEP1R1Q8N9A8 125 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 OR8A1Q8NGG7 326 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 ZC2HC1AQ96GY0 325 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 KAAG1Q9UBP8 84 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 RABAC1Q9UI14 185 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 CACNA1HO95180 2353 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 PLXNB1O43157 2135 aa3.1□□□□□ -1.91
SKP1-213ENST00000524288 CADP27708 2225 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 MUC6Q6W4X9 2439 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 IGHV3-21A0A0B4J1V1 117 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 A0A0B4J2C4 111 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 A8MWP4 228 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms