RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 K7EP34 96 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 M0R129 80 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 NCR2O95944 276 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 TNFP01375 233 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 IFITM1P13164 125 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 GUCA1AP43080 201 aaPredicted RBP0.97□□□□□ -2.25
CPNE3-207ENST00000523588 FXYD4P59646 89 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 PLGLB1Q02325 96 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 MRPL54Q6P161 138 aaKnown RBP0.97□□□□□ -2.25
CPNE3-207ENST00000523588 Q6ZQY7 126 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 Q6ZUT4 128 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 ATOH7Q8N100 152 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 KCNRGQ8N5I3 272 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 C10orf82Q8WW14 230 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 DPH3Q96FX2 82 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 SNRNP25Q9BV90 132 aaKnown RBP0.97□□□□□ -2.25
CPNE3-207ENST00000523588 DPY30Q9C005 99 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 TMEM191AQ9H0A3 160 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 UQCR10Q9UDW1 63 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 MPC1Q9Y5U8 109 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 CLASP1Q7Z460 1538 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 DUOX2Q9NRD8 1548 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 MYO5CQ9NQX4 1742 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 ATP10BO94823 1461 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 USP24Q9UPU5 2620 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 ANKRD50Q9ULJ7 1429 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 MROH1Q8NDA8 1641 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 KIAA1549LQ6ZVL6 1849 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 SBF2Q86WG5 1849 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 NRKQ7Z2Y5 1582 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 DIP2BQ9P265 1576 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 ABCC3O15438 1527 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 MAPKBP1O60336 1514 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 ARHGAP5Q13017 1502 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 HELZP42694 1942 aaKnown RBP0.96□□□□□ -2.26
CPNE3-207ENST00000523588 TRBV30A0A0K0K1B3 111 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 TCRBV3S1A0A5B6 114 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 ZNF727A8MUV8 499 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 YPEL1O60688 119 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 SIX6O95475 246 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 SFT2D2O95562 160 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 CYB5AP00167 134 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 SLC25A6P12236 298 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 RPL37AP61513 92 aaKnown RBP0.96□□□□□ -2.26
CPNE3-207ENST00000523588 Q0VG73 95 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 C9orf153Q5TBE3 101 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 OR2T2Q6IF00 324 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 HEPN1Q6WQI6 88 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 SLC25A26Q70HW3 274 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 C10orf111Q8N326 155 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 OTOSQ8NHW6 89 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 NABP2Q9BQ15 211 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 BANF2Q9H503 90 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 RERGLQ9H628 205 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 CCDC167Q9P0B6 97 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 PLEKHH2Q8IVE3 1493 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 ANK1P16157 1881 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 TARBP1Q13395 1621 aaKnown RBP0.96□□□□□ -2.26
CPNE3-207ENST00000523588 IQGAP3Q86VI3 1631 aa0.96□□□□□ -2.26
CPNE3-207ENST00000523588 RBBP6Q7Z6E9 1792 aaKnown RBP0.96□□□□□ -2.26
CPNE3-207ENST00000523588 CDC42BPAQ5VT25 1732 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 CUX1P39880 1505 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 DSPPQ9NZW4 1301 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 TANC1Q9C0D5 1861 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 TET3O43151 1660 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 PPRC1Q5VV67 1664 aaKnown RBP0.95□□□□□ -2.26
CPNE3-207ENST00000523588 ITSN2Q9NZM3 1697 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 IQSEC2Q5JU85 1478 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 TRBV20-1A0A075B6N2 111 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.95□□□□□ -2.26
CPNE3-207ENST00000523588 C7orf77A4D0Y5 90 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 OOSP1A8MZH6 123 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 TMEM262E9PQX1 116 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 M0R2P5 195 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 UQCRQO14949 82 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 PITX3O75364 302 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 NDUFB6O95139 128 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 IGHV3-30P01768 117 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 TCRAP04437 139 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 SLC25A5P05141 298 aaKnown RBP0.95□□□□□ -2.26
CPNE3-207ENST00000523588 LINC00032P0C843 101 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 IGLC2P0DOY2 106 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 IGLC3P0DOY3 106 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 IGHV3-30-5P0DP03 117 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 PYYP10082 97 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 CRYGSP22914 178 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 RPL22P35268 128 aaKnown RBP0.95□□□□□ -2.26
CPNE3-207ENST00000523588 SNCAP37840 140 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 QRFPP83859 136 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 HMGN3Q15651 99 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 ATP6V0E2Q8NHE4 81 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 BRK1Q8WUW1 75 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 LSM10Q969L4 123 aaKnown RBP0.95□□□□□ -2.26
CPNE3-207ENST00000523588 C20orf78Q9BR46 151 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 SPANXDQ9BXN6 97 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 AGPAT4-IT1Q9H0P7 198 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 CACFD1Q9UGQ2 172 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 NOP16Q9Y3C1 178 aaKnown RBP0.95□□□□□ -2.26
CPNE3-207ENST00000523588 KIF14Q15058 1648 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 ABCA6Q8N139 1617 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms