RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 K7EN84 100 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 SCO1O75880 301 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 ID1P41134 155 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 CEBPGP53567 150 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 FLI1Q01543 452 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-210ENST00000522843 ZNF674Q2M3X9 581 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 CENPWQ5EE01 88 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 FOXI2Q6ZQN5 318 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 OR4B1Q8NGF8 309 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 SFRP2Q96HF1 295 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 BTF3L4Q96K17 158 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 PSG8Q9UQ74 426 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 H3BTX0 84 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 M0R3E3 92 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 SNRPCP09234 159 aaKnown RBP4.42□□□□□ -1.7
SDCBP-210ENST00000522843 UBE2G1P62253 170 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 GNG5P63218 68 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 UBE2V1Q13404 147 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 ELOBQ15370 118 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 ADIRFQ15847 76 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 Q6ZSA8 131 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 GOLT1AQ6ZVE7 132 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 OR10G8Q8NGN5 311 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 FAM19A4Q96LR4 140 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 ODF3Q96PU9 254 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 AGPAT4-IT1Q9H0P7 198 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 V9GYV3 84 aa4.42□□□□□ -1.7
SDCBP-210ENST00000522843 IGLV5-52A0A0A0MRZ9 124 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 A0A0J9YX75 114 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 SMIM27A0A1W2PRY6 76 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 LRCOL1A6NCL2 159 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 PRAC2D3DTV9 90 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 H7BYZ3 331 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 SIVA1O15304 175 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 TYMSP04818 313 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 TSPOP30536 169 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 CRIP1P50238 77 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 HNRNPA3P51991 378 aaKnown RBP4.41□□□□□ -1.7
SDCBP-210ENST00000522843 ZNF138P52744 262 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 RPL36AP83881 106 aaKnown RBP4.41□□□□□ -1.7
SDCBP-210ENST00000522843 OR5I1Q13606 314 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 Q86TA4 180 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 VSIG2Q96IQ7 327 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 VGLL1Q99990 258 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 GFRA4Q9GZZ7 299 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 IL36BQ9NZH7 164 aa4.41□□□□□ -1.7
SDCBP-210ENST00000522843 A0A096LPF7 62 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 TRAV8-1A0A0A6YYK1 113 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 M0R2Z0 102 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 PRSS2P07478 247 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 CRISP2P16562 243 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 IBA57Q5T440 356 aaKnown RBP4.4□□□□□ -1.71
SDCBP-210ENST00000522843 PRNTQ86SH4 94 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 CBLN2Q8IUK8 224 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 LINC00612Q8N6U2 182 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 NHLRC2Q8NBF2 726 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 OR8A1Q8NGG7 326 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 TMEM208Q9BTX3 173 aa4.4□□□□□ -1.71
SDCBP-210ENST00000522843 A0A087WYN8 130 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 hDV102S1A0JD36 115 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 C5orf52A6NGY3 159 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 FABP5P3A8MUU1 101 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 A8MWL6 223 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 H3BNG1 76 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 GATCO43716 136 aaKnown RBP4.39□□□□□ -1.71
SDCBP-210ENST00000522843 NXPH4O95158 308 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 CXCL1P09341 107 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 CT45A10P0DMU9 189 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 S100PP25815 95 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 HIST1H1AQ02539 215 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-210ENST00000522843 SPINK13Q1W4C9 94 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 COX19Q49B96 90 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 SMUG1Q53HV7 270 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 DNLZQ5SXM8 178 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 TMEM78Q5T7P6 136 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 WDR73Q6P4I2 378 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 KCNIP4Q6PIL6 250 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 RASL11AQ6T310 242 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 NFE4Q86UQ8 179 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 RNF182Q8N6D2 247 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 NEXN-AS1Q8NBZ9 246 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 TSKUQ8WUA8 353 aa4.39□□□□□ -1.71
SDCBP-210ENST00000522843 NOP10Q9NPE3 64 aaKnown RBP4.39□□□□□ -1.71
SDCBP-210ENST00000522843 TRAV12-2A0A075B6T6 113 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 IGKV2-40A0A087WW87 121 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-210ENST00000522843 A0A1B0GUV1 79 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 KLLNB2CW77 178 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 PHOX2AO14813 284 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 DUSP14O95147 198 aaKnown RBP4.38□□□□□ -1.71
SDCBP-210ENST00000522843 IGKV2D-40P01614 121 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-210ENST00000522843 P01737 135 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 PRB4P10163 310 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-210ENST00000522843 RAB5AP20339 215 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 RPS20P60866 119 aaKnown RBP4.38□□□□□ -1.71
SDCBP-210ENST00000522843 RPL19P84098 196 aaKnown RBP4.38□□□□□ -1.71
SDCBP-210ENST00000522843 FAM162BQ5T6X4 162 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 Q6AWC8 147 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 ZFAND2AQ8N6M9 145 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 OR10J6PQ8NGY7 276 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 RNASE8Q8TDE3 154 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms