RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 KCNS1Q96KK3 526 aa3.84□□□□□ -1.79
VPS13B-211ENST00000522802 HYLS1Q96M11 299 aa3.84□□□□□ -1.79
VPS13B-211ENST00000522802 BCL7BQ9BQE9 202 aa3.84□□□□□ -1.79
VPS13B-211ENST00000522802 Q9H521 79 aa3.84□□□□□ -1.79
VPS13B-211ENST00000522802 PRR34Q9NV39 138 aa3.84□□□□□ -1.79
VPS13B-211ENST00000522802 IGLV10-54A0A075B6I4 117 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 C9orf170A2RU37 121 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 FAM231BA6NCW3 169 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 TMEM262E9PQX1 116 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 TAAR5O14804 337 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 FGF8P55075 233 aaPredicted RBP3.83□□□□□ -1.8
VPS13B-211ENST00000522802 UBE2L3P68036 154 aaKnown RBP3.83□□□□□ -1.8
VPS13B-211ENST00000522802 IAH1Q2TAA2 248 aaPredicted RBP3.83□□□□□ -1.8
VPS13B-211ENST00000522802 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 GOLT1AQ6ZVE7 132 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 SUN5Q8TC36 379 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 PTH2Q96A98 100 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 C2orf48Q96LS8 159 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 TREM1Q9NP99 234 aa3.83□□□□□ -1.8
VPS13B-211ENST00000522802 A0A096LNI7 61 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 TRBV6-8A0A0A6YYG3 113 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-211ENST00000522802 TRAV26-2A0A0B4J265 109 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 IGSF23A1L1A6 192 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 C5orf52A6NGY3 159 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 A8MWV9 139 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 CCSO14618 274 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 OR7C2O60412 319 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 EIF3GO75821 320 aaKnown RBP eCLIP3.82□□□□□ -1.8
VPS13B-211ENST00000522802 PTTG1O95997 202 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 UBE2D3P61077 147 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 UBE2D2P62837 147 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 CACNG7P62955 275 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 GNG5P63218 68 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 LGALSLQ3ZCW2 172 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-211ENST00000522802 FAM74A4Q5TZK3 123 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 LINC00269Q8N2A0 174 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 DIRAS2Q96HU8 199 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 NPCDR1Q9BY65 106 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 GSKIPQ9P0R6 139 aa3.82□□□□□ -1.8
VPS13B-211ENST00000522802 L7N2F9 121 aa3.81□□□□□ -1.8
VPS13B-211ENST00000522802 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
VPS13B-211ENST00000522802 FAUP35544 74 aaKnown RBP3.81□□□□□ -1.8
VPS13B-211ENST00000522802 BCAP31P51572 246 aa3.81□□□□□ -1.8
VPS13B-211ENST00000522802 CTAG1AP78358 180 aa3.81□□□□□ -1.8
VPS13B-211ENST00000522802 C15orf56Q8N910 161 aa3.81□□□□□ -1.8
VPS13B-211ENST00000522802 CHCHD5Q9BSY4 110 aa3.81□□□□□ -1.8
VPS13B-211ENST00000522802 C11orf1Q9H5F2 150 aa3.81□□□□□ -1.8
VPS13B-211ENST00000522802 VCX3AQ9NNX9 186 aa3.81□□□□□ -1.8
VPS13B-211ENST00000522802 PSORS1C2Q9UIG4 136 aa3.81□□□□□ -1.8
VPS13B-211ENST00000522802 LSM5Q9Y4Y9 91 aaKnown RBP3.81□□□□□ -1.8
VPS13B-211ENST00000522802 A0A087WXM4 84 aa3.8□□□□□ -1.8
VPS13B-211ENST00000522802 NDUFS6O75380 124 aaKnown RBP3.8□□□□□ -1.8
VPS13B-211ENST00000522802 GCGP01275 180 aa3.8□□□□□ -1.8
VPS13B-211ENST00000522802 RAB5CP51148 216 aa3.8□□□□□ -1.8
VPS13B-211ENST00000522802 RBX1P62877 108 aa3.8□□□□□ -1.8
VPS13B-211ENST00000522802 SPCS2Q15005 226 aa3.8□□□□□ -1.8
VPS13B-211ENST00000522802 ZNF674Q2M3X9 581 aa3.8□□□□□ -1.8
VPS13B-211ENST00000522802 SPANXN2Q5MJ10 180 aa3.8□□□□□ -1.8
VPS13B-211ENST00000522802 ZNF664Q8N3J9 261 aa3.8□□□□□ -1.8
VPS13B-211ENST00000522802 SLC25A21Q9BQT8 299 aaPredicted RBP3.8□□□□□ -1.8
VPS13B-211ENST00000522802 NMES1Q9C002 83 aa3.8□□□□□ -1.8
VPS13B-211ENST00000522802 SLIRPQ9GZT3 109 aaKnown RBP3.8□□□□□ -1.8
VPS13B-211ENST00000522802 RSL24D1Q9UHA3 163 aaKnown RBP3.8□□□□□ -1.8
VPS13B-211ENST00000522802 FLVCR2Q9UPI3 526 aa3.8□□□□□ -1.8
VPS13B-211ENST00000522802 CHTOPQ9Y3Y2 248 aaKnown RBP3.8□□□□□ -1.8
VPS13B-211ENST00000522802 TRBV7-3A0A075B6L6 115 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 IGKV3D-20A0A0C4DH25 116 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 H3BVH4 76 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 SULT1A1P50225 295 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 S100A10P60903 97 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 REG3AQ06141 175 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 HIGD2BQ4VC39 106 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 NTM-AS1Q6ZSK4 140 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 CMTM2Q8TAZ6 248 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 OTORQ9NRC9 128 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 MUC17Q685J3 4493 aa3.79□□□□□ -1.8
VPS13B-211ENST00000522802 TRBV10-1A0A0K0K1A3 114 aa3.78□□□□□ -1.8
VPS13B-211ENST00000522802 ATP6V1G2O95670 118 aa3.78□□□□□ -1.8
VPS13B-211ENST00000522802 S100A11P31949 105 aa3.78□□□□□ -1.8
VPS13B-211ENST00000522802 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
VPS13B-211ENST00000522802 TOMM5Q8N4H5 51 aa3.78□□□□□ -1.8
VPS13B-211ENST00000522802 TMEM252Q8N6L7 170 aa3.78□□□□□ -1.8
VPS13B-211ENST00000522802 NDFIP1Q9BT67 221 aa3.78□□□□□ -1.8
VPS13B-211ENST00000522802 LYRM2Q9NU23 88 aaPredicted RBP3.78□□□□□ -1.8
VPS13B-211ENST00000522802 OR5AC2Q9NZP5 309 aa3.78□□□□□ -1.8
VPS13B-211ENST00000522802 A0A087WZ39 114 aa3.77□□□□□ -1.81
VPS13B-211ENST00000522802 TRAV34A0A0B4J273 112 aa3.77□□□□□ -1.81
VPS13B-211ENST00000522802 NDUFB6O95139 128 aa3.77□□□□□ -1.81
VPS13B-211ENST00000522802 S100A4P26447 101 aaKnown RBP3.77□□□□□ -1.81
VPS13B-211ENST00000522802 RPS10P46783 165 aaKnown RBP3.77□□□□□ -1.81
VPS13B-211ENST00000522802 AP3S2P59780 193 aa3.77□□□□□ -1.81
VPS13B-211ENST00000522802 HBG1P69891 147 aa3.77□□□□□ -1.81
VPS13B-211ENST00000522802 HBG2P69892 147 aa3.77□□□□□ -1.81
VPS13B-211ENST00000522802 KHDC3LQ587J8 217 aa3.77□□□□□ -1.81
VPS13B-211ENST00000522802 STX12Q86Y82 276 aa3.77□□□□□ -1.81
VPS13B-211ENST00000522802 C20orf203Q8NBC4 194 aa3.77□□□□□ -1.81
VPS13B-211ENST00000522802 Q8NBF4 154 aa3.77□□□□□ -1.81
VPS13B-211ENST00000522802 INO80EQ8NBZ0 244 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms