RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 HMGN4O00479 90 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 NDUFB3O43676 98 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 CSN2P05814 226 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 RNASE3P12724 160 aaKnown RBP1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 MIFP14174 115 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 EIF2B2P49770 351 aaKnown RBP1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 PIGPP57054 158 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 ELOBQ15370 118 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 SCGB2B2Q4G0G5 96 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 SPRNQ5BIV9 151 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR2T2Q6IF00 324 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 CLECL1Q8IZS7 167 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR5AS1Q8N127 324 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 Q8N2B8 174 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 EXOC3-AS1Q8N2X6 119 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR9Q1Q8NGQ5 310 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 DNAJC9Q8WXX5 260 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 TSC22D3Q99576 134 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR2H1Q9GZK4 316 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 SPANXA1Q9NS26 97 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 DNAJC15Q9Y5T4 150 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 STAB2Q8WWQ8 2551 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 TENM2Q9NT68 2774 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 TENM3Q9P273 2699 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 DUXBA0A1W2PPF3 345 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 MRPS14O60783 128 aaKnown RBP1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 TCL1BO95988 128 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 GYPAP02724 150 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 S100A4P26447 101 aaKnown RBP1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 GTF2A1P52655 376 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 LTC4SQ16873 150 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 CCDC58Q4VC31 144 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 TOMM20LQ6UXN7 152 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 VMO1Q7Z5L0 202 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 C10orf111Q8N326 155 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR5A1Q8NGJ0 315 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 IMUPQ9GZP8 106 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 PBOV1Q9GZY1 135 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 RERGLQ9H628 205 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 OSTCQ9NRP0 149 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 VWFP04275 2813 aa1.53□□□□□ -2.17
HMGB1P1-201ENST00000522557 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.17
HMGB1P1-201ENST00000522557 TRBV6-5A0A0K0K1A5 114 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 IQCF6A8MYZ5 107 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 M0QZK8 103 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 M0R1W7 72 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 KPNA4O00629 521 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 CYB5BO43169 146 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 BRS3P32247 399 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 YPEL3P61236 119 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 CDK6Q00534 326 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 PRB3Q04118 309 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 C10orf128Q5T292 105 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 UNQ6190/PRO20217Q6UXQ8 127 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 IFT20Q8IY31 132 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 C15orf53Q8NAA6 179 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 OR4D11Q8NGI4 311 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 C10orf82Q8WW14 230 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 PLEKHB2Q96CS7 222 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 SLAMF6Q96DU3 332 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 TEX37Q96LM6 180 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 TPT1P8Q9HAU6 139 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 BCL2L10Q9HD36 194 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 KAAG1Q9UBP8 84 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 OR52A1Q9UKL2 312 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 EPDR1Q9UM22 224 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 TNCP24821 2201 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 CPSF4LA6NMK7 179 aaKnown RBP1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 J3KT08 172 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 RER1O15258 196 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 TPST1O60507 370 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 FAM107AO95990 144 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 IGF2P01344 180 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 NFYBP25208 207 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 POLR2JP52435 117 aaKnown RBP1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 BLCAPP62952 87 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 KLRD1Q13241 179 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 RRN3P1Q2M238 152 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 TRAPPC6BQ86SZ2 158 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 SBSPONQ8IVN8 264 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 C4orf33Q8N1A6 199 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 THEM6Q8WUY1 208 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 SPTSSAQ969W0 71 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 ISOC1Q96CN7 298 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 PFDN5Q99471 154 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 GINS4Q9BRT9 223 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 CST9LQ9H4G1 147 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 MED31Q9Y3C7 131 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 TRRAPQ9Y4A5 3859 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 TAX1BP3O14907 124 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 DEGS1O15121 323 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 LY6G6CO95867 125 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 ASAH2BP0C7U1 165 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 RPL7P18124 248 aaKnown RBP1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 INSL3P51460 131 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 CAV3P56539 151 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 CKS1BP61024 79 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 EIF5AP63241 154 aaKnown RBP1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 PDE6HQ13956 83 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 WHAMMP3Q1A5X7 153 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms