RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TRBV6-5A0A0K0K1A5 114 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 TRBV6-4A0A1B0GX49 114 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 K7EQD1 137 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST1H2BKO60814 126 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST1H2BJP06899 126 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST1H2BOP23527 126 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST1H2BBP33778 126 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST1H2BDP58876 126 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST1H2BCP62807 126 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST2H2BEQ16778 126 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 OR10J3Q5JRS4 329 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST1H2BHQ93079 126 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST1H2BNQ99877 126 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HIST1H2BMQ99879 126 aa9.23□□□□□ -0.93
CPNE3-205ENST00000522240 HUWE1Q7Z6Z7 4374 aaKnown RBP9.22□□□□□ -0.93
CPNE3-205ENST00000522240 TRGV4A0A0C4DH28 118 aa9.22□□□□□ -0.93
CPNE3-205ENST00000522240 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
CPNE3-205ENST00000522240 TNFRSF6BO95407 300 aa9.22□□□□□ -0.93
CPNE3-205ENST00000522240 NPYP01303 97 aa9.22□□□□□ -0.93
CPNE3-205ENST00000522240 FHL2Q14192 279 aa9.22□□□□□ -0.93
CPNE3-205ENST00000522240 RHOHQ15669 191 aa9.22□□□□□ -0.93
CPNE3-205ENST00000522240 C12orf74Q32Q52 190 aa9.22□□□□□ -0.93
CPNE3-205ENST00000522240 C18orf32Q8TCD1 76 aa9.22□□□□□ -0.93
CPNE3-205ENST00000522240 MAP1LC3AQ9H492 121 aa9.22□□□□□ -0.93
CPNE3-205ENST00000522240 PRSS47A8MTI9 375 aa9.21□□□□□ -0.94
CPNE3-205ENST00000522240 GAS8-AS1O95177 125 aa9.21□□□□□ -0.94
CPNE3-205ENST00000522240 RPL32P62910 135 aaKnown RBP9.21□□□□□ -0.94
CPNE3-205ENST00000522240 Q0VG73 95 aa9.21□□□□□ -0.94
CPNE3-205ENST00000522240 C11orf45Q8TAV5 145 aa9.21□□□□□ -0.94
CPNE3-205ENST00000522240 DNAJC30Q96LL9 226 aa9.21□□□□□ -0.94
CPNE3-205ENST00000522240 C20orf78Q9BR46 151 aa9.21□□□□□ -0.94
CPNE3-205ENST00000522240 NIT2Q9NQR4 276 aa9.21□□□□□ -0.94
CPNE3-205ENST00000522240 DNAH9Q9NYC9 4486 aa9.21□□□□□ -0.94
CPNE3-205ENST00000522240 SUMO2P61956 95 aaKnown RBP9.2□□□□□ -0.94
CPNE3-205ENST00000522240 Q6ZSN1 163 aa9.2□□□□□ -0.94
CPNE3-205ENST00000522240 SLC25A29Q8N8R3 303 aa9.2□□□□□ -0.94
CPNE3-205ENST00000522240 RPL39LQ96EH5 51 aaKnown RBP9.2□□□□□ -0.94
CPNE3-205ENST00000522240 PRADC1Q9BSG0 188 aa9.2□□□□□ -0.94
CPNE3-205ENST00000522240 PRO0255Q9UI72 69 aa9.2□□□□□ -0.94
CPNE3-205ENST00000522240 HOXA5P20719 270 aa9.19□□□□□ -0.94
CPNE3-205ENST00000522240 CRYBA4P53673 196 aa9.19□□□□□ -0.94
CPNE3-205ENST00000522240 COA6Q5JTJ3 125 aaKnown RBP9.19□□□□□ -0.94
CPNE3-205ENST00000522240 Q6ZTC4 211 aa9.19□□□□□ -0.94
CPNE3-205ENST00000522240 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
CPNE3-205ENST00000522240 SMIM2Q9BVW6 85 aa9.19□□□□□ -0.94
CPNE3-205ENST00000522240 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
CPNE3-205ENST00000522240 P0DMU3 169 aa9.18□□□□□ -0.94
CPNE3-205ENST00000522240 FAM231AP0DMU4 169 aa9.18□□□□□ -0.94
CPNE3-205ENST00000522240 FAM231CP0DMU5 169 aa9.18□□□□□ -0.94
CPNE3-205ENST00000522240 PMCHP20382 165 aa9.18□□□□□ -0.94
CPNE3-205ENST00000522240 RPL36AP83881 106 aaKnown RBP9.18□□□□□ -0.94
CPNE3-205ENST00000522240 IQCJQ1A5X6 159 aa9.18□□□□□ -0.94
CPNE3-205ENST00000522240 RPL36ALQ969Q0 106 aaKnown RBP9.18□□□□□ -0.94
CPNE3-205ENST00000522240 TMEM70Q9BUB7 260 aa9.18□□□□□ -0.94
CPNE3-205ENST00000522240 NXT2Q9NPJ8 142 aaKnown RBP9.18□□□□□ -0.94
CPNE3-205ENST00000522240 HHLA3Q9XRX5 114 aa9.18□□□□□ -0.94
CPNE3-205ENST00000522240 SDHAF1A6NFY7 115 aa9.17□□□□□ -0.94
CPNE3-205ENST00000522240 F5H768 121 aa9.17□□□□□ -0.94
CPNE3-205ENST00000522240 LINC00694P0DN24 101 aa9.17□□□□□ -0.94
CPNE3-205ENST00000522240 POLR2KP53803 58 aaKnown RBP9.17□□□□□ -0.94
CPNE3-205ENST00000522240 NANOS2P60321 138 aaKnown RBP9.17□□□□□ -0.94
CPNE3-205ENST00000522240 TNFRSF18Q9Y5U5 241 aa9.17□□□□□ -0.94
CPNE3-205ENST00000522240 IGLV2-18A0A075B6J9 118 aa9.16□□□□□ -0.94
CPNE3-205ENST00000522240 TRBV7-3A0A075B6L6 115 aa9.16□□□□□ -0.94
CPNE3-205ENST00000522240 TRBV27A0A0K0K1C4 114 aa9.16□□□□□ -0.94
CPNE3-205ENST00000522240 K7EMI3 77 aa9.16□□□□□ -0.94
CPNE3-205ENST00000522240 BAGE3Q86Y29 109 aa9.16□□□□□ -0.94
CPNE3-205ENST00000522240 Q8N8P6 123 aa9.16□□□□□ -0.94
CPNE3-205ENST00000522240 TRAV10A0A0B4J240 114 aa9.15□□□□□ -0.94
CPNE3-205ENST00000522240 LINC01546A6NGU7 62 aa9.15□□□□□ -0.94
CPNE3-205ENST00000522240 H3BNG1 76 aa9.15□□□□□ -0.94
CPNE3-205ENST00000522240 TCAPO15273 167 aa9.15□□□□□ -0.94
CPNE3-205ENST00000522240 PAX4O43316 350 aa9.15□□□□□ -0.94
CPNE3-205ENST00000522240 S100A6P06703 90 aa9.15□□□□□ -0.94
CPNE3-205ENST00000522240 HTN3P15516 51 aa9.15□□□□□ -0.94
CPNE3-205ENST00000522240 FA2HQ7L5A8 372 aa9.15□□□□□ -0.94
CPNE3-205ENST00000522240 PRSS3P2Q8NHM4 247 aa9.15□□□□□ -0.94
CPNE3-205ENST00000522240 CHCHD1Q96BP2 118 aaKnown RBP9.15□□□□□ -0.94
CPNE3-205ENST00000522240 CDIP1Q9H305 208 aa9.15□□□□□ -0.94
CPNE3-205ENST00000522240 LOC389332A0A1B0GUA5 103 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 VCYO14598 125 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 SERF1AO75920 110 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 ESDP10768 282 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 IFI27P40305 119 aaPredicted RBP9.14□□□□□ -0.95
CPNE3-205ENST00000522240 NDUFA6P56556 154 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 LINC00310P59036 64 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 UBE2D3P61077 147 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 UBE2D2P62837 147 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 DAZ4Q86SG3 579 aaKnown RBP9.14□□□□□ -0.95
CPNE3-205ENST00000522240 ZNRF2Q8NHG8 242 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 URB1-AS1Q96HZ7 61 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 VSIG2Q96IQ7 327 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 KIR2DL4Q99706 377 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 DAZ3Q9NR90 486 aaKnown RBP9.14□□□□□ -0.95
CPNE3-205ENST00000522240 Q9UF83 564 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 STAB2Q8WWQ8 2551 aa9.14□□□□□ -0.95
CPNE3-205ENST00000522240 RYR3Q15413 4870 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 TRAV26-1A0A087WT03 109 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 DEFB131BA0A096LNP1 70 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms