RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 SLC25A29Q8N8R3 303 aa15.09■□□□□ 0.01
R3HCC1-208ENST00000522012 EDA2RQ9HAV5 297 aa15.09■□□□□ 0.01
R3HCC1-208ENST00000522012 NIT2Q9NQR4 276 aa15.09■□□□□ 0.01
R3HCC1-208ENST00000522012 K7EQD1 137 aa15.08■□□□□ 0.01
R3HCC1-208ENST00000522012 NANOS2P60321 138 aaKnown RBP15.08■□□□□ 0.01
R3HCC1-208ENST00000522012 BAGE3Q86Y29 109 aa15.08■□□□□ 0.01
R3HCC1-208ENST00000522012 MAP1LC3AQ9H492 121 aa15.08■□□□□ 0.01
R3HCC1-208ENST00000522012 HHLA3Q9XRX5 114 aa15.08■□□□□ 0.01
R3HCC1-208ENST00000522012 PRKDCP78527 4128 aaKnown RBP15.08■□□□□ 0
R3HCC1-208ENST00000522012 Q0VG73 95 aa15.07■□□□□ 0
R3HCC1-208ENST00000522012 ST20Q9HBF5 79 aa15.07■□□□□ 0
R3HCC1-208ENST00000522012 Q9UF83 564 aa15.07■□□□□ 0
R3HCC1-208ENST00000522012 TRBV6-4A0A1B0GX49 114 aa15.07■□□□□ 0
R3HCC1-208ENST00000522012 F5H768 121 aa15.07■□□□□ 0
R3HCC1-208ENST00000522012 SUMO2P61956 95 aaKnown RBP15.06■□□□□ 0
R3HCC1-208ENST00000522012 Q6ZTC4 211 aa15.06■□□□□ 0
R3HCC1-208ENST00000522012 PRSS3P2Q8NHM4 247 aa15.06■□□□□ 0
R3HCC1-208ENST00000522012 C20orf78Q9BR46 151 aa15.06■□□□□ 0
R3HCC1-208ENST00000522012 TNFRSF18Q9Y5U5 241 aa15.06■□□□□ 0
R3HCC1-208ENST00000522012 S100A6P06703 90 aa15.05■□□□□ -0
R3HCC1-208ENST00000522012 NEXN-AS1Q8NBZ9 246 aa15.05■□□□□ -0
R3HCC1-208ENST00000522012 PRADC1Q9BSG0 188 aa15.05■□□□□ -0
R3HCC1-208ENST00000522012 PRO0255Q9UI72 69 aa15.05■□□□□ -0
R3HCC1-208ENST00000522012 TRBV6-5A0A0K0K1A5 114 aa15.04■□□□□ -0
R3HCC1-208ENST00000522012 RHOHQ15669 191 aa15.04■□□□□ -0
R3HCC1-208ENST00000522012 TRBV10-1A0A0K0K1A3 114 aa15.03■□□□□ -0
R3HCC1-208ENST00000522012 IFI27P40305 119 aaPredicted RBP15.03■□□□□ -0
R3HCC1-208ENST00000522012 CRYBA4P53673 196 aa15.03■□□□□ -0
R3HCC1-208ENST00000522012 NIT1Q86X76 327 aa15.03■□□□□ -0
R3HCC1-208ENST00000522012 DNAJC30Q96LL9 226 aa15.03■□□□□ -0
R3HCC1-208ENST00000522012 LOC100131303A0A0U1RQF7 123 aa15.02■□□□□ -0
R3HCC1-208ENST00000522012 SDHAF1A6NFY7 115 aa15.02■□□□□ -0
R3HCC1-208ENST00000522012 ZNRF2Q8NHG8 242 aa15.02■□□□□ -0
R3HCC1-208ENST00000522012 GAGE12JA6NER3 117 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 PRSS47A8MTI9 375 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 PAX4O43316 350 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 PMCHP20382 165 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 RPL36AP83881 106 aaKnown RBP15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 GAGE1Q13065 139 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 GAGE4Q13068 117 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 GAGE5Q13069 117 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 GAGE13Q4V321 117 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 RNASEKQ6P5S7 137 aaKnown RBP15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 FA2HQ7L5A8 372 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 NEGR1Q7Z3B1 354 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 RPL36ALQ969Q0 106 aaKnown RBP15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 TMEM70Q9BUB7 260 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 SMIM2Q9BVW6 85 aa15.02□□□□□ -0.01
R3HCC1-208ENST00000522012 A0A0J9YY99 117 aa15.01□□□□□ -0.01
R3HCC1-208ENST00000522012 SERF1AO75920 110 aa15.01□□□□□ -0.01
R3HCC1-208ENST00000522012 LINC00614P0C842 121 aa15.01□□□□□ -0.01
R3HCC1-208ENST00000522012 NXT2Q9NPJ8 142 aaKnown RBP15.01□□□□□ -0.01
R3HCC1-208ENST00000522012 NACAE9PAV3 2078 aa15□□□□□ -0.01
R3HCC1-208ENST00000522012 TRBV7-3A0A075B6L6 115 aa15□□□□□ -0.01
R3HCC1-208ENST00000522012 TRAV26-1A0A087WT03 109 aa15□□□□□ -0.01
R3HCC1-208ENST00000522012 VCYO14598 125 aa15□□□□□ -0.01
R3HCC1-208ENST00000522012 POLR2KP53803 58 aaKnown RBP15□□□□□ -0.01
R3HCC1-208ENST00000522012 Q8N8P6 123 aa15□□□□□ -0.01
R3HCC1-208ENST00000522012 URB1-AS1Q96HZ7 61 aa15□□□□□ -0.01
R3HCC1-208ENST00000522012 GYPEP15421 78 aa14.99□□□□□ -0.01
R3HCC1-208ENST00000522012 COA6Q5JTJ3 125 aaKnown RBP14.99□□□□□ -0.01
R3HCC1-208ENST00000522012 DEFB104AQ8WTQ1 72 aa14.99□□□□□ -0.01
R3HCC1-208ENST00000522012 IGLV2-18A0A075B6J9 118 aa14.98□□□□□ -0.01
R3HCC1-208ENST00000522012 DEFB131BA0A096LNP1 70 aa14.98□□□□□ -0.01
R3HCC1-208ENST00000522012 NUPR1O60356 82 aa14.98□□□□□ -0.01
R3HCC1-208ENST00000522012 SNRPEP62304 92 aaKnown RBP14.98□□□□□ -0.01
R3HCC1-208ENST00000522012 RPL32P62910 135 aaKnown RBP14.98□□□□□ -0.01
R3HCC1-208ENST00000522012 VSIG2Q96IQ7 327 aa14.98□□□□□ -0.01
R3HCC1-208ENST00000522012 TENM3Q9P273 2699 aa14.98□□□□□ -0.01
R3HCC1-208ENST00000522012 LINC00310P59036 64 aa14.97□□□□□ -0.01
R3HCC1-208ENST00000522012 PHLDA1Q8WV24 401 aaPredicted RBP14.97□□□□□ -0.01
R3HCC1-208ENST00000522012 TRBV27A0A0K0K1C4 114 aa14.97□□□□□ -0.01
R3HCC1-208ENST00000522012 TCAPO15273 167 aa14.97□□□□□ -0.01
R3HCC1-208ENST00000522012 CHCHD1Q96BP2 118 aaKnown RBP14.97□□□□□ -0.01
R3HCC1-208ENST00000522012 HUWE1Q7Z6Z7 4374 aaKnown RBP14.96□□□□□ -0.01
R3HCC1-208ENST00000522012 TRAV10A0A0B4J240 114 aa14.96□□□□□ -0.02
R3HCC1-208ENST00000522012 IGHV3-38A0A0C4DH36 116 aa14.96□□□□□ -0.02
R3HCC1-208ENST00000522012 I3L3M4 83 aa14.96□□□□□ -0.02
R3HCC1-208ENST00000522012 UBE2D3P61077 147 aa14.96□□□□□ -0.02
R3HCC1-208ENST00000522012 UBE2D2P62837 147 aa14.96□□□□□ -0.02
R3HCC1-208ENST00000522012 KIR2DL4Q99706 377 aa14.96□□□□□ -0.02
R3HCC1-208ENST00000522012 AP5S1Q9NUS5 200 aa14.96□□□□□ -0.02
R3HCC1-208ENST00000522012 HSBP1O75506 76 aa14.95□□□□□ -0.02
R3HCC1-208ENST00000522012 PDZD11Q5EBL8 140 aa14.94□□□□□ -0.02
R3HCC1-208ENST00000522012 C5orf52A6NGY3 159 aa14.93□□□□□ -0.02
R3HCC1-208ENST00000522012 FCER1GP30273 86 aa14.93□□□□□ -0.02
R3HCC1-208ENST00000522012 DAZ4Q86SG3 579 aaKnown RBP14.93□□□□□ -0.02
R3HCC1-208ENST00000522012 DAZ3Q9NR90 486 aaKnown RBP14.93□□□□□ -0.02
R3HCC1-208ENST00000522012 LAGE3Q14657 143 aa14.92□□□□□ -0.02
R3HCC1-208ENST00000522012 PMCHL1Q16048 86 aa14.92□□□□□ -0.02
R3HCC1-208ENST00000522012 DNAH9Q9NYC9 4486 aa14.92□□□□□ -0.02
R3HCC1-208ENST00000522012 LINC01546A6NGU7 62 aa14.92□□□□□ -0.02
R3HCC1-208ENST00000522012 TSHBP01222 138 aa14.92□□□□□ -0.02
R3HCC1-208ENST00000522012 ESDP10768 282 aa14.92□□□□□ -0.02
R3HCC1-208ENST00000522012 FAM19A2Q8N3H0 131 aa14.92□□□□□ -0.02
R3HCC1-208ENST00000522012 A0A096LPF7 62 aa14.91□□□□□ -0.02
R3HCC1-208ENST00000522012 LINC00694P0DN24 101 aa14.91□□□□□ -0.02
R3HCC1-208ENST00000522012 COTL1Q14019 142 aa14.91□□□□□ -0.02
R3HCC1-208ENST00000522012 ATP6V0E2Q8NHE4 81 aa14.91□□□□□ -0.02
R3HCC1-208ENST00000522012 ICOSQ9Y6W8 199 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms