RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 A0A096LPF7 62 aa16.8■□□□□ 0.28
PVT1-212ENST00000521951 GAS8-AS1O95177 125 aa16.8■□□□□ 0.28
PVT1-212ENST00000521951 GAGE12JA6NER3 117 aa16.8■□□□□ 0.28
PVT1-212ENST00000521951 SMKR1H3BMG3 65 aa16.8■□□□□ 0.28
PVT1-212ENST00000521951 GAGE1Q13065 139 aa16.8■□□□□ 0.28
PVT1-212ENST00000521951 GAGE4Q13068 117 aa16.8■□□□□ 0.28
PVT1-212ENST00000521951 GAGE5Q13069 117 aa16.8■□□□□ 0.28
PVT1-212ENST00000521951 MRPL23Q16540 153 aaKnown RBP16.8■□□□□ 0.28
PVT1-212ENST00000521951 GAGE13Q4V321 117 aa16.8■□□□□ 0.28
PVT1-212ENST00000521951 HLA-DQA1P01909 254 aa16.79■□□□□ 0.28
PVT1-212ENST00000521951 ZNRF2Q8NHG8 242 aa16.79■□□□□ 0.28
PVT1-212ENST00000521951 NIT2Q9NQR4 276 aa16.79■□□□□ 0.28
PVT1-212ENST00000521951 NCR2O95944 276 aa16.78■□□□□ 0.28
PVT1-212ENST00000521951 TCTAP57738 103 aa16.78■□□□□ 0.28
PVT1-212ENST00000521951 RPL36AP83881 106 aaKnown RBP16.78■□□□□ 0.28
PVT1-212ENST00000521951 RPL36ALQ969Q0 106 aaKnown RBP16.78■□□□□ 0.28
PVT1-212ENST00000521951 RPL39LQ96EH5 51 aaKnown RBP16.78■□□□□ 0.28
PVT1-212ENST00000521951 LINC00694P0DN24 101 aa16.77■□□□□ 0.28
PVT1-212ENST00000521951 SRIP30626 198 aa16.77■□□□□ 0.28
PVT1-212ENST00000521951 CKS2P33552 79 aa16.77■□□□□ 0.28
PVT1-212ENST00000521951 DNAJC30Q96LL9 226 aa16.77■□□□□ 0.28
PVT1-212ENST00000521951 TENM2Q9NT68 2774 aa16.77■□□□□ 0.27
PVT1-212ENST00000521951 TRBV7-3A0A075B6L6 115 aa16.76■□□□□ 0.27
PVT1-212ENST00000521951 D6R8Y8 96 aa16.75■□□□□ 0.27
PVT1-212ENST00000521951 MT-ND6P03923 174 aa16.75■□□□□ 0.27
PVT1-212ENST00000521951 RPS10P46783 165 aaKnown RBP16.75■□□□□ 0.27
PVT1-212ENST00000521951 PLECQ15149 4684 aaKnown RBP16.75■□□□□ 0.27
PVT1-212ENST00000521951 TNFRSF18Q9Y5U5 241 aa16.75■□□□□ 0.27
PVT1-212ENST00000521951 COLCA2A8K830 154 aa16.75■□□□□ 0.27
PVT1-212ENST00000521951 APCSP02743 223 aa16.75■□□□□ 0.27
PVT1-212ENST00000521951 OR10J3Q5JRS4 329 aa16.75■□□□□ 0.27
PVT1-212ENST00000521951 PPBPP02775 128 aa16.74■□□□□ 0.27
PVT1-212ENST00000521951 UBE2D3P61077 147 aa16.74■□□□□ 0.27
PVT1-212ENST00000521951 UBE2D2P62837 147 aa16.74■□□□□ 0.27
PVT1-212ENST00000521951 NEGR1Q7Z3B1 354 aa16.74■□□□□ 0.27
PVT1-212ENST00000521951 NRACQ8N912 160 aa16.74■□□□□ 0.27
PVT1-212ENST00000521951 MRPL18Q9H0U6 180 aaKnown RBP16.74■□□□□ 0.27
PVT1-212ENST00000521951 KIAA1644Q3SXP7 199 aa16.73■□□□□ 0.27
PVT1-212ENST00000521951 SH2D6Q7Z4S9 175 aa16.73■□□□□ 0.27
PVT1-212ENST00000521951 ORMDL3Q8N138 153 aa16.73■□□□□ 0.27
PVT1-212ENST00000521951 ATP6V0E2Q8NHE4 81 aa16.73■□□□□ 0.27
PVT1-212ENST00000521951 TRAPPC1Q9Y5R8 145 aa16.73■□□□□ 0.27
PVT1-212ENST00000521951 TRBV6-5A0A0K0K1A5 114 aa16.71■□□□□ 0.27
PVT1-212ENST00000521951 PPP1R17O96001 155 aa16.71■□□□□ 0.27
PVT1-212ENST00000521951 FABP9Q0Z7S8 132 aa16.71■□□□□ 0.27
PVT1-212ENST00000521951 PRELID3AQ96N28 172 aa16.7■□□□□ 0.26
PVT1-212ENST00000521951 TNFRSF6BO95407 300 aa16.7■□□□□ 0.26
PVT1-212ENST00000521951 ST20Q9HBF5 79 aa16.7■□□□□ 0.26
PVT1-212ENST00000521951 IGHV3-38A0A0C4DH36 116 aa16.69■□□□□ 0.26
PVT1-212ENST00000521951 NPYP01303 97 aa16.69■□□□□ 0.26
PVT1-212ENST00000521951 ESRGQ1W209 222 aa16.69■□□□□ 0.26
PVT1-212ENST00000521951 LYPD5Q6UWN5 251 aa16.69■□□□□ 0.26
PVT1-212ENST00000521951 SDHAF1A6NFY7 115 aa16.68■□□□□ 0.26
PVT1-212ENST00000521951 GTSF1LQ9H1H1 148 aa16.68■□□□□ 0.26
PVT1-212ENST00000521951 RAB5AP20339 215 aa16.67■□□□□ 0.26
PVT1-212ENST00000521951 DAZ4Q86SG3 579 aaKnown RBP16.67■□□□□ 0.26
PVT1-212ENST00000521951 DAZ3Q9NR90 486 aaKnown RBP16.67■□□□□ 0.26
PVT1-212ENST00000521951 PHOX2AO14813 284 aa16.66■□□□□ 0.26
PVT1-212ENST00000521951 POLR2KP53803 58 aaKnown RBP16.66■□□□□ 0.26
PVT1-212ENST00000521951 SUMO2P61956 95 aaKnown RBP16.66■□□□□ 0.26
PVT1-212ENST00000521951 TMEM70Q9BUB7 260 aa16.66■□□□□ 0.26
PVT1-212ENST00000521951 C20orf78Q9BR46 151 aa16.65■□□□□ 0.26
PVT1-212ENST00000521951 LAMTOR2Q9Y2Q5 125 aa16.65■□□□□ 0.26
PVT1-212ENST00000521951 CCL18P55774 89 aa16.65■□□□□ 0.26
PVT1-212ENST00000521951 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.65■□□□□ 0.26
PVT1-212ENST00000521951 ALKBH7Q9BT30 221 aaPredicted RBP16.65■□□□□ 0.26
PVT1-212ENST00000521951 TIRAPP58753 221 aa16.64■□□□□ 0.25
PVT1-212ENST00000521951 DEFB104AQ8WTQ1 72 aa16.63■□□□□ 0.25
PVT1-212ENST00000521951 LINC00588Q9Y4M8 146 aa16.63■□□□□ 0.25
PVT1-212ENST00000521951 PMCHP20382 165 aa16.62■□□□□ 0.25
PVT1-212ENST00000521951 TRBV27A0A0K0K1C4 114 aa16.61■□□□□ 0.25
PVT1-212ENST00000521951 I3L3M4 83 aa16.61■□□□□ 0.25
PVT1-212ENST00000521951 VCYO14598 125 aa16.61■□□□□ 0.25
PVT1-212ENST00000521951 TRGC2P03986 189 aa16.61■□□□□ 0.25
PVT1-212ENST00000521951 RPL32P62910 135 aaKnown RBP16.61■□□□□ 0.25
PVT1-212ENST00000521951 PRSS47A8MTI9 375 aa16.6■□□□□ 0.25
PVT1-212ENST00000521951 NTM-AS1Q6ZSK4 140 aa16.6■□□□□ 0.25
PVT1-212ENST00000521951 MAP1LC3AQ9H492 121 aa16.6■□□□□ 0.25
PVT1-212ENST00000521951 LELP1Q5T871 98 aa16.6■□□□□ 0.25
PVT1-212ENST00000521951 UBE2DNLQ8IWF7 75 aa16.6■□□□□ 0.25
PVT1-212ENST00000521951 SMIM2Q9BVW6 85 aa16.6■□□□□ 0.25
PVT1-212ENST00000521951 LOC389332A0A1B0GUA5 103 aa16.59■□□□□ 0.25
PVT1-212ENST00000521951 COTL1Q14019 142 aa16.59■□□□□ 0.25
PVT1-212ENST00000521951 TMEM97Q5BJF2 176 aa16.59■□□□□ 0.25
PVT1-212ENST00000521951 MRPS16Q9Y3D3 137 aaKnown RBP16.59■□□□□ 0.25
PVT1-212ENST00000521951 TRBV6-8A0A0A6YYG3 113 aa16.58■□□□□ 0.24
PVT1-212ENST00000521951 LGALS9CQ6DKI2 356 aa16.58■□□□□ 0.24
PVT1-212ENST00000521951 TSHBP01222 138 aa16.56■□□□□ 0.24
PVT1-212ENST00000521951 LYSTQ99698 3801 aa16.56■□□□□ 0.24
PVT1-212ENST00000521951 IGLV2-18A0A075B6J9 118 aa16.55■□□□□ 0.24
PVT1-212ENST00000521951 KIR2DL4Q99706 377 aa16.55■□□□□ 0.24
PVT1-212ENST00000521951 UPK3BQ9BT76 320 aa16.55■□□□□ 0.24
PVT1-212ENST00000521951 VPS13DQ5THJ4 4388 aa16.54■□□□□ 0.24
PVT1-212ENST00000521951 TRAV8-6A0A0B4J262 113 aa16.54■□□□□ 0.24
PVT1-212ENST00000521951 IGHV1-24A0A0C4DH33 117 aa16.54■□□□□ 0.24
PVT1-212ENST00000521951 IQCJQ1A5X6 159 aa16.54■□□□□ 0.24
PVT1-212ENST00000521951 Q8N8P6 123 aa16.54■□□□□ 0.24
PVT1-212ENST00000521951 LINC00476Q8WZB0 136 aa16.54■□□□□ 0.24
PVT1-212ENST00000521951 ALMS1Q8TCU4 4167 aa16.53■□□□□ 0.24
PVT1-212ENST00000521951 TRBV25-1A0A075B6N4 114 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms