RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 FOXI1Q12951 378 aa9.13□□□□□ -0.95
DENND3-217ENST00000521835 USMG5Q96IX5 58 aa9.13□□□□□ -0.95
DENND3-217ENST00000521835 HIVEP2P31629 2446 aa9.13□□□□□ -0.95
DENND3-217ENST00000521835 KNCNA6PVL3 124 aa9.12□□□□□ -0.95
DENND3-217ENST00000521835 HECTD1Q9ULT8 2610 aa9.12□□□□□ -0.95
DENND3-217ENST00000521835 TRBV20-1A0A075B6N2 111 aa9.12□□□□□ -0.95
DENND3-217ENST00000521835 TMEM170BQ5T4T1 132 aa9.12□□□□□ -0.95
DENND3-217ENST00000521835 C18orf65Q6ZTR6 163 aa9.12□□□□□ -0.95
DENND3-217ENST00000521835 MRPL53Q96EL3 112 aaKnown RBP9.12□□□□□ -0.95
DENND3-217ENST00000521835 PSMG3-AS1Q96PY0 264 aa9.12□□□□□ -0.95
DENND3-217ENST00000521835 CITED2Q99967 270 aaPredicted RBP9.12□□□□□ -0.95
DENND3-217ENST00000521835 SOCS3O14543 225 aa9.12□□□□□ -0.95
DENND3-217ENST00000521835 SRSF2Q01130 221 aaKnown RBP9.11□□□□□ -0.95
DENND3-217ENST00000521835 SRSF9Q13242 221 aaKnown RBP eCLIP9.11□□□□□ -0.95
DENND3-217ENST00000521835 ZNF815PA8K554 130 aa9.11□□□□□ -0.95
DENND3-217ENST00000521835 F8VRH5 84 aa9.11□□□□□ -0.95
DENND3-217ENST00000521835 FHL3Q13643 280 aa9.11□□□□□ -0.95
DENND3-217ENST00000521835 PRADC1Q9BSG0 188 aa9.11□□□□□ -0.95
DENND3-217ENST00000521835 ITPR3Q14573 2671 aa9.11□□□□□ -0.95
DENND3-217ENST00000521835 H7C1H1 209 aa9.1□□□□□ -0.95
DENND3-217ENST00000521835 WIPF1O43516 503 aa9.1□□□□□ -0.95
DENND3-217ENST00000521835 SLC25A16P16260 332 aa9.1□□□□□ -0.95
DENND3-217ENST00000521835 ORMDL2Q53FV1 153 aa9.1□□□□□ -0.95
DENND3-217ENST00000521835 C19orf54Q5BKX5 351 aa9.1□□□□□ -0.95
DENND3-217ENST00000521835 SUMO4Q6EEV6 95 aa9.1□□□□□ -0.95
DENND3-217ENST00000521835 RNASE13Q5GAN3 156 aaKnown RBP9.1□□□□□ -0.95
DENND3-217ENST00000521835 BAALCQ8WXS3 180 aa9.1□□□□□ -0.95
DENND3-217ENST00000521835 SDHAF1A6NFY7 115 aa9.1□□□□□ -0.95
DENND3-217ENST00000521835 IGHV4OR15-8A0A075B7B6 117 aa9.09□□□□□ -0.95
DENND3-217ENST00000521835 A0A087WW49 117 aa9.09□□□□□ -0.95
DENND3-217ENST00000521835 SMIM9A6NGZ8 99 aa9.09□□□□□ -0.95
DENND3-217ENST00000521835 NDUFV3P56181 108 aaKnown RBP9.09□□□□□ -0.95
DENND3-217ENST00000521835 CEND1Q8N111 149 aa9.09□□□□□ -0.95
DENND3-217ENST00000521835 IGHV3OR16-12A0A075B7B8 117 aa9.09□□□□□ -0.95
DENND3-217ENST00000521835 Q8N1Y9 231 aa9.09□□□□□ -0.95
DENND3-217ENST00000521835 P0DMU3 169 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 FAM231AP0DMU4 169 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 FAM231CP0DMU5 169 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 PLNP26678 52 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 SNRPD3P62318 126 aaKnown RBP9.08□□□□□ -0.96
DENND3-217ENST00000521835 PLEKHB2Q96CS7 222 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 HELZ2Q9BYK8 2649 aaKnown RBP9.08□□□□□ -0.96
DENND3-217ENST00000521835 A0A1W2PRX2 142 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 H7C2G1 150 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 SLURP1P55000 103 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 KIR2DL4Q99706 377 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 HLA-DRB4P13762 266 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 KRTAP10-9P60411 292 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 TTC32Q5I0X7 151 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 DCANP1Q8TF63 244 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 HLA-DRB4X5D2U9 266 aa9.08□□□□□ -0.96
DENND3-217ENST00000521835 E9PLD3 99 aa9.07□□□□□ -0.96
DENND3-217ENST00000521835 HOXA3O43365 443 aaPredicted RBP9.07□□□□□ -0.96
DENND3-217ENST00000521835 ZNF876PQ49A33 203 aa9.07□□□□□ -0.96
DENND3-217ENST00000521835 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
DENND3-217ENST00000521835 ZMAT4Q9H898 229 aa9.07□□□□□ -0.96
DENND3-217ENST00000521835 PRO0461Q9UI25 63 aa9.07□□□□□ -0.96
DENND3-217ENST00000521835 C11orf86A6NJI1 115 aa9.07□□□□□ -0.96
DENND3-217ENST00000521835 IGLV1-40P01703 118 aa9.06□□□□□ -0.96
DENND3-217ENST00000521835 HOXD3P31249 432 aaPredicted RBP9.06□□□□□ -0.96
DENND3-217ENST00000521835 PROK1P58294 105 aa9.06□□□□□ -0.96
DENND3-217ENST00000521835 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
DENND3-217ENST00000521835 DEFB131AP59861 70 aa9.06□□□□□ -0.96
DENND3-217ENST00000521835 GAGE2BQ13066 116 aa9.06□□□□□ -0.96
DENND3-217ENST00000521835 GAGE2EQ4V326 116 aa9.06□□□□□ -0.96
DENND3-217ENST00000521835 GAGE2DQ9UEU5 116 aa9.06□□□□□ -0.96
DENND3-217ENST00000521835 LENEPQ9Y5L5 61 aa9.06□□□□□ -0.96
DENND3-217ENST00000521835 MYMXA0A1B0GTQ4 84 aa9.06□□□□□ -0.96
DENND3-217ENST00000521835 RHODO00212 210 aa9.06□□□□□ -0.96
DENND3-217ENST00000521835 APCP25054 2843 aa9.05□□□□□ -0.96
DENND3-217ENST00000521835 ADARB2-AS1A8MUL3 147 aa9.05□□□□□ -0.96
DENND3-217ENST00000521835 IGLL5B9A064 214 aa9.05□□□□□ -0.96
DENND3-217ENST00000521835 C12orf74Q32Q52 190 aa9.05□□□□□ -0.96
DENND3-217ENST00000521835 ZFP2Q6ZN57 461 aa9.05□□□□□ -0.96
DENND3-217ENST00000521835 PSMB8P28062 276 aa9.05□□□□□ -0.96
DENND3-217ENST00000521835 CEMP1Q6PRD7 247 aaPredicted RBP9.05□□□□□ -0.96
DENND3-217ENST00000521835 NEXN-AS1Q8NBZ9 246 aa9.05□□□□□ -0.96
DENND3-217ENST00000521835 SPANXA1Q9NS26 97 aa9.05□□□□□ -0.96
DENND3-217ENST00000521835 IGHV4-4A0A075B6R2 117 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 IGHV3-16A0A0C4DH30 117 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 IFITM1P13164 125 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 NFE4Q86UQ8 179 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 ATP6V0E2Q8NHE4 81 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 PHLDA1Q8WV24 401 aaPredicted RBP9.04□□□□□ -0.96
DENND3-217ENST00000521835 ITPR2Q14571 2701 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 LGALS1P09382 135 aaKnown RBP9.04□□□□□ -0.96
DENND3-217ENST00000521835 APRG1Q8IVJ8 170 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 LINC01356Q8N9X3 169 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 ZNF469Q96JG9 3925 aaPredicted RBP9.04□□□□□ -0.96
DENND3-217ENST00000521835 COX6B1P14854 86 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 HIST2H2BCQ6DN03 193 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 C3orf56Q8N813 242 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 TMEM126AQ9H061 195 aa9.04□□□□□ -0.96
DENND3-217ENST00000521835 IGHV3-38A0A0C4DH36 116 aa9.03□□□□□ -0.96
DENND3-217ENST00000521835 Q9UF83 564 aa9.03□□□□□ -0.96
DENND3-217ENST00000521835 A0A0J9YX75 114 aa9.02□□□□□ -0.96
DENND3-217ENST00000521835 LINC01549A6NIU2 74 aa9.02□□□□□ -0.96
DENND3-217ENST00000521835 KLLNB2CW77 178 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms