RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 RHPN1-AS1Q9BWJ2 59 aa5.18□□□□□ -1.58
CTNNA1-227ENST00000521387 MSRB1Q9NZV6 116 aa5.18□□□□□ -1.58
CTNNA1-227ENST00000521387 IGKV3-7A0A075B6H7 116 aa5.17□□□□□ -1.58
CTNNA1-227ENST00000521387 C2orf70A6NJV1 201 aa5.17□□□□□ -1.58
CTNNA1-227ENST00000521387 TWIST1Q15672 202 aa5.17□□□□□ -1.58
CTNNA1-227ENST00000521387 FAM106AQ4KMX7 169 aa5.17□□□□□ -1.58
CTNNA1-227ENST00000521387 AMN1Q8IY45 258 aa5.17□□□□□ -1.58
CTNNA1-227ENST00000521387 C6orf223Q8N319 242 aa5.17□□□□□ -1.58
CTNNA1-227ENST00000521387 KIR2DL5BQ8NHK3 375 aa5.17□□□□□ -1.58
CTNNA1-227ENST00000521387 RNF185Q96GF1 192 aa5.17□□□□□ -1.58
CTNNA1-227ENST00000521387 TRAV10A0A0B4J240 114 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 IGHV1-24A0A0C4DH33 117 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 D6R8Y8 96 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 F6UB75 175 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 SMKR1H3BMG3 65 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 RPL11P62913 178 aaKnown RBP5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 ZFAND2AQ8N6M9 145 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 OR8A1Q8NGG7 326 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 OR10J6PQ8NGY7 276 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 FAM19A4Q96LR4 140 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 PRELID3AQ96N28 172 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 C20orf144Q9BQM9 153 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 NDUFAF3Q9BU61 184 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 CNFNQ9BYD5 112 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 DAZ1Q9NQZ3 744 aaKnown RBP5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 PAM16Q9Y3D7 125 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 LENEPQ9Y5L5 61 aa5.16□□□□□ -1.58
CTNNA1-227ENST00000521387 LOC389332A0A1B0GUA5 103 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 J3KRW8 73 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 NPYP01303 97 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 BTF3P20290 206 aaKnown RBP5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 RAB4AP20338 218 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 IFI27P40305 119 aaPredicted RBP5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 KRTAP10-1P60331 282 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 HAMPP81172 84 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 LELP1Q5T871 98 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 TMEM61Q8N0U2 210 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 OR11H2Q8NH07 326 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 VAMP8Q9BV40 100 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 TMEM191AQ9H0A3 160 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 MAP6D1Q9H9H5 199 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 UFC1Q9Y3C8 167 aa5.15□□□□□ -1.59
CTNNA1-227ENST00000521387 SNAI2O43623 268 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 GAS8-AS1O95177 125 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 NCR2O95944 276 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 RPL35AP18077 110 aaKnown RBP5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 RNASE4P34096 147 aaKnown RBP5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 KIR3DS1Q14943 382 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 SPATA45Q537H7 98 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 FA2HQ7L5A8 372 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 ATOH7Q8N100 152 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 ORMDL3Q8N138 153 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 OR10AG1Q8NH19 301 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 PRSS3P2Q8NHM4 247 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 DCANP1Q8TF63 244 aa5.14□□□□□ -1.59
CTNNA1-227ENST00000521387 A0A096LNJ9 63 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 TRAV21A0A0B4J279 112 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 SYS1-DBNDD2H3BUS1 97 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 K7EQG2 157 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 LEPROTL1O95214 131 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 OR5AL1P0C617 328 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 GATA1P15976 413 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 CKS2P33552 79 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 ID1P41134 155 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 TFPI2P48307 235 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 CACNG7P62955 275 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 MAJINQ3KP22 176 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 ANXA2RQ3ZCQ2 193 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 ZNF705AQ6ZN79 300 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 APRG1Q8IVJ8 170 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 UBE2DNLQ8IWF7 75 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 Q8NAQ8 132 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 MIEN1Q9BRT3 115 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 TMEM70Q9BUB7 260 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 MS4A6AQ9H2W1 248 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
CTNNA1-227ENST00000521387 TRAV9-2A0A087WT02 112 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 DEFB131BA0A096LNP1 70 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 TRBV7-9A0A0J9YWB2 115 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 H3BVH4 76 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 EREGO14944 169 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 GNRH2O43555 120 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 ZNF688P0C7X2 276 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 EVI2AP22794 236 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 FXYD7P58549 80 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 DYNLRB2Q8TF09 96 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 SNHG12Q9BXW3 62 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 AP5S1Q9NUS5 200 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 PEMTQ9UBM1 199 aa5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 TIMM8BQ9Y5J9 83 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-227ENST00000521387 NBDYA0A0U1RRE5 68 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 LINC01546A6NGU7 62 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 OR4C46A6NHA9 309 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 KLLNB2CW77 178 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 CRXO43186 299 aaPredicted RBP5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 TNFRSF6BO95407 300 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 OXTP01178 125 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 C12orf74Q32Q52 190 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 PET117Q6UWS5 81 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 C2orf88Q9BSF0 95 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms