RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 TNFRSF18Q9Y5U5 241 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 PAX4O43316 350 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 GAS8-AS1O95177 125 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 PMCHP20382 165 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 HOXA5P20719 270 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 SUMO2P61956 95 aaKnown RBP6.32□□□□□ -1.4
CSMD1-208ENST00000520561 RPL36AP83881 106 aaKnown RBP6.32□□□□□ -1.4
CSMD1-208ENST00000520561 IQCJQ1A5X6 159 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 Q6ZSN1 163 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 SLC25A29Q8N8R3 303 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 C18orf32Q8TCD1 76 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 RPL36ALQ969Q0 106 aaKnown RBP6.32□□□□□ -1.4
CSMD1-208ENST00000520561 C20orf78Q9BR46 151 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 NACAE9PAV3 2078 aa6.32□□□□□ -1.4
CSMD1-208ENST00000520561 TRBV6-5A0A0K0K1A5 114 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 LOC389332A0A1B0GUA5 103 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 S100A6P06703 90 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 P0DMU3 169 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 FAM231AP0DMU4 169 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 FAM231CP0DMU5 169 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 CRYBA4P53673 196 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 Q0VG73 95 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 FA2HQ7L5A8 372 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 NEXN-AS1Q8NBZ9 246 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 PRSS3P2Q8NHM4 247 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 SMIM2Q9BVW6 85 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 NXT2Q9NPJ8 142 aaKnown RBP6.31□□□□□ -1.4
CSMD1-208ENST00000520561 HHLA3Q9XRX5 114 aa6.31□□□□□ -1.4
CSMD1-208ENST00000520561 TRBV7-3A0A075B6L6 115 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 TRAV26-1A0A087WT03 109 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 DEFB131BA0A096LNP1 70 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 TRAV10A0A0B4J240 114 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 A0A0J9YY99 117 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 GAGE12JA6NER3 117 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 SDHAF1A6NFY7 115 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 NDUFA6P56556 154 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 RPL32P62910 135 aaKnown RBP6.3□□□□□ -1.4
CSMD1-208ENST00000520561 GAGE1Q13065 139 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 GAGE4Q13068 117 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 GAGE5Q13069 117 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 GAGE13Q4V321 117 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 RNASEKQ6P5S7 137 aaKnown RBP6.3□□□□□ -1.4
CSMD1-208ENST00000520561 ZNRF2Q8NHG8 242 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
CSMD1-208ENST00000520561 PRSS47A8MTI9 375 aa6.29□□□□□ -1.4
CSMD1-208ENST00000520561 VCYO14598 125 aa6.29□□□□□ -1.4
CSMD1-208ENST00000520561 GYPEP15421 78 aa6.29□□□□□ -1.4
CSMD1-208ENST00000520561 Q8N8P6 123 aa6.29□□□□□ -1.4
CSMD1-208ENST00000520561 KIR2DL4Q99706 377 aa6.29□□□□□ -1.4
CSMD1-208ENST00000520561 ICOSQ9Y6W8 199 aa6.29□□□□□ -1.4
CSMD1-208ENST00000520561 TRBV27A0A0K0K1C4 114 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 LOC100131303A0A0U1RQF7 123 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 I3L3M4 83 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 TCAPO15273 167 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 HSBP1O75506 76 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 SERF1AO75920 110 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 FCER1GP30273 86 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 IFI27P40305 119 aaPredicted RBP6.28□□□□□ -1.4
CSMD1-208ENST00000520561 POLR2KP53803 58 aaKnown RBP6.28□□□□□ -1.4
CSMD1-208ENST00000520561 UBE2D3P61077 147 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 UBE2D2P62837 147 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 COTL1Q14019 142 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 NEGR1Q7Z3B1 354 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 DAZ4Q86SG3 579 aaKnown RBP6.28□□□□□ -1.4
CSMD1-208ENST00000520561 CHCHD1Q96BP2 118 aaKnown RBP6.28□□□□□ -1.4
CSMD1-208ENST00000520561 DAZ3Q9NR90 486 aaKnown RBP6.28□□□□□ -1.4
CSMD1-208ENST00000520561 AP5S1Q9NUS5 200 aa6.28□□□□□ -1.4
CSMD1-208ENST00000520561 HUWE1Q7Z6Z7 4374 aaKnown RBP6.28□□□□□ -1.4
CSMD1-208ENST00000520561 H3BNG1 76 aa6.27□□□□□ -1.41
CSMD1-208ENST00000520561 K7EMI3 77 aa6.27□□□□□ -1.41
CSMD1-208ENST00000520561 LINC00614P0C842 121 aa6.27□□□□□ -1.41
CSMD1-208ENST00000520561 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
CSMD1-208ENST00000520561 MRPL23Q16540 153 aaKnown RBP6.27□□□□□ -1.41
CSMD1-208ENST00000520561 ORMDL2Q53FV1 153 aa6.27□□□□□ -1.41
CSMD1-208ENST00000520561 COA6Q5JTJ3 125 aaKnown RBP6.27□□□□□ -1.41
CSMD1-208ENST00000520561 SH2D6Q7Z4S9 175 aa6.27□□□□□ -1.41
CSMD1-208ENST00000520561 NIT1Q86X76 327 aa6.27□□□□□ -1.41
CSMD1-208ENST00000520561 PHLDA1Q8WV24 401 aaPredicted RBP6.27□□□□□ -1.41
CSMD1-208ENST00000520561 VSIG2Q96IQ7 327 aa6.27□□□□□ -1.41
CSMD1-208ENST00000520561 Q9UF83 564 aa6.27□□□□□ -1.41
CSMD1-208ENST00000520561 IGLV2-18A0A075B6J9 118 aa6.26□□□□□ -1.41
CSMD1-208ENST00000520561 IGHV3-38A0A0C4DH36 116 aa6.26□□□□□ -1.41
CSMD1-208ENST00000520561 LAGE3Q14657 143 aa6.26□□□□□ -1.41
CSMD1-208ENST00000520561 TMEM97Q5BJF2 176 aa6.26□□□□□ -1.41
CSMD1-208ENST00000520561 ATP6V0E2Q8NHE4 81 aa6.26□□□□□ -1.41
CSMD1-208ENST00000520561 URB1-AS1Q96HZ7 61 aa6.26□□□□□ -1.41
CSMD1-208ENST00000520561 DNAH9Q9NYC9 4486 aa6.26□□□□□ -1.41
CSMD1-208ENST00000520561 NUDT3O95989 172 aa6.25□□□□□ -1.41
CSMD1-208ENST00000520561 TSHBP01222 138 aa6.25□□□□□ -1.41
CSMD1-208ENST00000520561 ESDP10768 282 aa6.25□□□□□ -1.41
CSMD1-208ENST00000520561 G0S2P27469 103 aa6.25□□□□□ -1.41
CSMD1-208ENST00000520561 S100A2P29034 98 aa6.25□□□□□ -1.41
CSMD1-208ENST00000520561 AMTP48728 403 aa6.25□□□□□ -1.41
CSMD1-208ENST00000520561 C15orf53Q8NAA6 179 aa6.25□□□□□ -1.41
CSMD1-208ENST00000520561 TENM3Q9P273 2699 aa6.25□□□□□ -1.41
CSMD1-208ENST00000520561 NBEAL2Q6ZNJ1 2754 aa6.24□□□□□ -1.41
CSMD1-208ENST00000520561 A0A096LPF7 62 aa6.24□□□□□ -1.41
CSMD1-208ENST00000520561 NUPR2A6NF83 97 aa6.24□□□□□ -1.41
CSMD1-208ENST00000520561 LINC01546A6NGU7 62 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms