RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 DAZ2Q13117 558 aaKnown RBP6.12□□□□□ -1.43
VAPB-206ENST00000520497 JOSD1Q15040 202 aaPredicted RBP6.12□□□□□ -1.43
VAPB-206ENST00000520497 LGALS9BQ3B8N2 356 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 ORMDL2Q53FV1 153 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 SMIM2Q9BVW6 85 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 KRTAP9-2Q9BYQ4 174 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 TP53TG1Q9Y2A0 90 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 TRAV26-2A0A0B4J265 109 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 NUPR1O60356 82 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 BTF3P20290 206 aaKnown RBP6.11□□□□□ -1.43
VAPB-206ENST00000520497 RPL32P62910 135 aaKnown RBP6.11□□□□□ -1.43
VAPB-206ENST00000520497 LAGE3Q14657 143 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 SUMO4Q6EEV6 95 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 ZFP2Q6ZN57 461 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 FAM19A2Q8N3H0 131 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 NRACQ8N912 160 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 RASL10AQ92737 203 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 OVOL2Q9BRP0 275 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 MAP1LC3CQ9BXW4 147 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 JPT2Q9H910 190 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 KIF25-AS1Q9Y6Z4 181 aa6.11□□□□□ -1.43
VAPB-206ENST00000520497 TRGV1A0A0A0MS02 117 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 KRTAP9-6A0A140TA67 174 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 VCYO14598 125 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 MIFP14174 115 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 LINC00315P59091 139 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 UFSP1Q6NVU6 142 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 Q8NAQ8 132 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 OR4C5Q8NGB2 326 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 OR11H2Q8NH07 326 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 KIR2DL4Q99706 377 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 TMEM70Q9BUB7 260 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 EDA2RQ9HAV5 297 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 NIT2Q9NQR4 276 aa6.1□□□□□ -1.43
VAPB-206ENST00000520497 MRPL16Q9NX20 251 aaKnown RBP6.1□□□□□ -1.43
VAPB-206ENST00000520497 STAB2Q8WWQ8 2551 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 TRAV4A0A0B4J268 109 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 IGHV4-28A0A0C4DH34 117 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 TRBV6-5A0A0K0K1A5 114 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 LINC01546A6NGU7 62 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 RS1O15537 224 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 ATP5LO75964 103 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 CRYGDP07320 174 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 FCER1GP30273 86 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 PMCHL1Q16048 86 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 PYY3Q5JQD4 70 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 Q6ZTI0 123 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 SBSPONQ8IVN8 264 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 LINC00612Q8N6U2 182 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 URB1-AS1Q96HZ7 61 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 DNAJC30Q96LL9 226 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 NOP10Q9NPE3 64 aaKnown RBP6.09□□□□□ -1.43
VAPB-206ENST00000520497 TNFRSF18Q9Y5U5 241 aa6.09□□□□□ -1.43
VAPB-206ENST00000520497 TRGV2A0A075B6R0 118 aa6.08□□□□□ -1.44
VAPB-206ENST00000520497 NUDT3O95989 172 aa6.08□□□□□ -1.44
VAPB-206ENST00000520497 GATA1P15976 413 aaPredicted RBP6.08□□□□□ -1.44
VAPB-206ENST00000520497 CFAP126Q5VTH2 177 aa6.08□□□□□ -1.44
VAPB-206ENST00000520497 PET117Q6UWS5 81 aa6.08□□□□□ -1.44
VAPB-206ENST00000520497 RPL39LQ96EH5 51 aaKnown RBP6.08□□□□□ -1.44
VAPB-206ENST00000520497 TM2D3Q9BRN9 247 aa6.08□□□□□ -1.44
VAPB-206ENST00000520497 RETNQ9HD89 108 aa6.08□□□□□ -1.44
VAPB-206ENST00000520497 COL7A1Q02388 2944 aa6.07□□□□□ -1.44
VAPB-206ENST00000520497 TEX48A0A1B0GUV7 120 aa6.07□□□□□ -1.44
VAPB-206ENST00000520497 SDHAF1A6NFY7 115 aa6.07□□□□□ -1.44
VAPB-206ENST00000520497 LYRM9A8MSI8 78 aa6.07□□□□□ -1.44
VAPB-206ENST00000520497 TSTD3H0UI37 97 aa6.07□□□□□ -1.44
VAPB-206ENST00000520497 SYS1-DBNDD2H3BUS1 97 aa6.07□□□□□ -1.44
VAPB-206ENST00000520497 M0QY20 66 aa6.07□□□□□ -1.44
VAPB-206ENST00000520497 C3orf79P0CE67 100 aa6.07□□□□□ -1.44
VAPB-206ENST00000520497 C18orf15Q96N68 181 aa6.07□□□□□ -1.44
VAPB-206ENST00000520497 IGLV2-18A0A075B6J9 118 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 IGHV3-73A0A0B4J1V6 119 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 TRBV10-1A0A0K0K1A3 114 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 HSBP1L1C9JCN9 74 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 I3L3M4 83 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 GAS8-AS1O95177 125 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 IGHV3-53P01767 116 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 EMP1P54849 157 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 RHOHQ15669 191 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 DEFB121Q5J5C9 76 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 FAM222AQ5U5X8 452 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 MRAPQ8TCY5 172 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 IFI27L1Q96BM0 104 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 SPATA25Q9BR10 227 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 VAMP8Q9BV40 100 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 C11orf68Q9H3H3 251 aaKnown RBP6.06□□□□□ -1.44
VAPB-206ENST00000520497 DKK2Q9UBU2 259 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 CYSLTR1Q9Y271 337 aa6.06□□□□□ -1.44
VAPB-206ENST00000520497 TRGV4A0A0C4DH28 118 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 TRBV27A0A0K0K1C4 114 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 GAGE12BA1L429 117 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 K7EQD1 137 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 DEFB4AO15263 64 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 GAGE7O76087 117 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 GAGE12FP0CL80 117 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 GAGE12GP0CL81 117 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 GAGE12IP0CL82 117 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 POLR2KP53803 58 aaKnown RBP6.05□□□□□ -1.44
VAPB-206ENST00000520497 RPL36AP83881 106 aaKnown RBP6.05□□□□□ -1.44
VAPB-206ENST00000520497 SMAGPQ0VAQ4 97 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms