RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 MYO9BQ13459 2157 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 IGHV3-21A0A0B4J1V1 117 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 IGHV7-4-1A0A0J9YVY3 117 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 TRBV27A0A0K0K1C4 114 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 TMEM223A0PJW6 202 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 IGIPA6NJ69 53 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 M0R1W7 72 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 LST1O00453 97 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 BCE1O60756 84 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 NDUFC2O95298 119 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 MGPP08493 103 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 CCL3L1P16619 93 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 LOXP28300 417 aaPredicted RBP2.57□□□□□ -2
CSMD3-209ENST00000519485 ID1P41134 155 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 ZNF80P51504 273 aaPredicted RBP2.57□□□□□ -2
CSMD3-209ENST00000519485 HERVK_113P63121 156 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 KLK9Q2XQG4 91 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 NSUN5P1Q3KNT7 163 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 LCE1CQ5T751 118 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 FAM222AQ5U5X8 452 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 ATP5EP2Q5VTU8 51 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 IGFL2Q6UWQ7 119 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 MUSTN1Q8IVN3 82 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 LY6G5BQ8NDX9 201 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 CCL17Q92583 94 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 TIMM21Q9BVV7 248 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 HES7Q9BYE0 225 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 KLK9Q9UKQ9 250 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 TP53TG1Q9Y2A0 90 aa2.57□□□□□ -2
CSMD3-209ENST00000519485 ASCC3Q8N3C0 2202 aaKnown RBP2.57□□□□□ -2
CSMD3-209ENST00000519485 DNAH12Q6ZR08 3092 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 MYO7AQ13402 2215 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 TEX49A0A1B0GTD5 131 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 EPOPA6NHQ4 379 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 FAM223BA6NKX1 122 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 H3BQ85 93 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 LY6LH3BQJ8 138 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 H7C2G1 150 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 I3L3M4 83 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 NXPH4O95158 308 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 CTSGP08311 255 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 LINC00694P0DN24 101 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 ZNF22P17026 224 aaPredicted RBP2.56□□□□□ -2
CSMD3-209ENST00000519485 MIAQ16674 131 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 C5orf38Q86SI9 138 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 FAM223AQ8IWN6 122 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 DYNAPQ8N1N2 210 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 SERP2Q8N6R1 65 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 KLHL30-AS1Q8NEE0 82 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 Q8TAT8 98 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 LINC01587Q99440 93 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 CHCHD5Q9BSY4 110 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 AGPAT4-IT1Q9H0P7 198 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 EDA2RQ9HAV5 297 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 DSCAML1Q8TD84 2053 aa2.56□□□□□ -2
CSMD3-209ENST00000519485 IGLV4-69A0A075B6H9 119 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 IGHV3-72A0A0B4J1Y9 119 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 TRAV13-2A0A0B4J235 113 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 IGHV1-58A0A0C4DH39 117 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 TINCRA0A1B0GVN0 87 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 PCNX2A6NKB5 2137 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 H0YGX0 51 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 COX7A2LO14548 114 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 CDK2AP2O75956 126 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 DNAL4O96015 105 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 TRGV3P03979 118 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 GATA1P15976 413 aaPredicted RBP2.55□□□□□ -2
CSMD3-209ENST00000519485 RNASE4P34096 147 aaKnown RBP2.55□□□□□ -2
CSMD3-209ENST00000519485 POLR2KP53803 58 aaKnown RBP2.55□□□□□ -2
CSMD3-209ENST00000519485 UCNP55089 124 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 RPL18AQ02543 176 aaKnown RBP2.55□□□□□ -2
CSMD3-209ENST00000519485 SFTA2Q6UW10 78 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 SRCAPQ6ZRS2 3230 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 FAM19A5Q7Z5A7 132 aaPredicted RBP2.55□□□□□ -2
CSMD3-209ENST00000519485 C14orf178Q8N769 122 aaPredicted RBP2.55□□□□□ -2
CSMD3-209ENST00000519485 RNASE6Q93091 150 aaKnown RBP2.55□□□□□ -2
CSMD3-209ENST00000519485 VSIG2Q96IQ7 327 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 PRORYQ9H606 182 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 LAMTOR3Q9UHA4 124 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 LINC00527Q9UJ94 153 aa2.55□□□□□ -2
CSMD3-209ENST00000519485 PI4KAP42356 2102 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 TRAV8-3A0A0A6YYJ7 113 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 TRAV13-1A0A0B4J241 112 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 TRAV26-2A0A0B4J265 109 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 hADV29S1A0JD25 119 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 H3BUA1 57 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 NDUFC1O43677 76 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 BRI3O95415 125 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 BAALC-AS2P0C853 105 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 APELAP0DMC3 54 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 CNTFRP26992 372 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 UBE2E1P51965 193 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 ATP5EP56381 51 aaPredicted RBP2.54□□□□□ -2
CSMD3-209ENST00000519485 C15orf32Q32M92 178 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 Q6JHZ5 121 aa2.54□□□□□ -2
CSMD3-209ENST00000519485 IGFL3Q6UXB1 125 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms