RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 IFNA7P01567 189 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 GZMBP10144 247 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 SERF2P84101 59 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 ZNF56Q15929 161 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 IQCJQ1A5X6 159 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 ZNF674Q2M3X9 581 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 REG3GQ6UW15 175 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 ENKURQ8TC29 256 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 HIST1H2BAQ96A08 127 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 DERL1Q9BUN8 251 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 LPAP08519 4548 aa7.73□□□□□ -1.17
TRAPPC9-204ENST00000518723 TMSB15BA0A087X1C1 80 aa7.72□□□□□ -1.17
TRAPPC9-204ENST00000518723 ATP6V0CP27449 155 aa7.72□□□□□ -1.17
TRAPPC9-204ENST00000518723 SPINK6Q6UWN8 80 aa7.72□□□□□ -1.17
TRAPPC9-204ENST00000518723 GTSF1Q8WW33 167 aa7.72□□□□□ -1.17
TRAPPC9-204ENST00000518723 ACTR3CQ9C0K3 210 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC9-204ENST00000518723 C20orf203Q8NBC4 194 aa7.71□□□□□ -1.18
TRAPPC9-204ENST00000518723 FMC1Q96HJ9 113 aa7.71□□□□□ -1.18
TRAPPC9-204ENST00000518723 NKX6-2Q9C056 277 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC9-204ENST00000518723 TNFSF18Q9UNG2 199 aa7.71□□□□□ -1.18
TRAPPC9-204ENST00000518723 IGHV1-24A0A0C4DH33 117 aa7.7□□□□□ -1.18
TRAPPC9-204ENST00000518723 A0A1B0GUV1 79 aa7.7□□□□□ -1.18
TRAPPC9-204ENST00000518723 INMT-MINDY4F8WBC2 141 aa7.7□□□□□ -1.18
TRAPPC9-204ENST00000518723 NDUFS6O75380 124 aaKnown RBP7.7□□□□□ -1.18
TRAPPC9-204ENST00000518723 CXCL1P09341 107 aa7.7□□□□□ -1.18
TRAPPC9-204ENST00000518723 COX6A2Q02221 97 aa7.7□□□□□ -1.18
TRAPPC9-204ENST00000518723 OR10AG1Q8NH19 301 aa7.7□□□□□ -1.18
TRAPPC9-204ENST00000518723 MUC2Q02817 5179 aa7.69□□□□□ -1.18
TRAPPC9-204ENST00000518723 FAM74A7A6NL05 159 aa7.69□□□□□ -1.18
TRAPPC9-204ENST00000518723 SSNA1O43805 119 aa7.69□□□□□ -1.18
TRAPPC9-204ENST00000518723 LTAP01374 205 aa7.69□□□□□ -1.18
TRAPPC9-204ENST00000518723 UBE2G2P60604 165 aa7.69□□□□□ -1.18
TRAPPC9-204ENST00000518723 SRSF9Q13242 221 aaKnown RBP eCLIP7.69□□□□□ -1.18
TRAPPC9-204ENST00000518723 MAJINQ3KP22 176 aa7.69□□□□□ -1.18
TRAPPC9-204ENST00000518723 C15orf56Q8N910 161 aa7.69□□□□□ -1.18
TRAPPC9-204ENST00000518723 MARVELD1Q9BSK0 173 aa7.69□□□□□ -1.18
TRAPPC9-204ENST00000518723 ZNF471Q9BX82 626 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC9-204ENST00000518723 F5H697 171 aa7.68□□□□□ -1.18
TRAPPC9-204ENST00000518723 SNAI2O43623 268 aa7.68□□□□□ -1.18
TRAPPC9-204ENST00000518723 RPS10P46783 165 aaKnown RBP7.68□□□□□ -1.18
TRAPPC9-204ENST00000518723 UBE2G1P62253 170 aa7.68□□□□□ -1.18
TRAPPC9-204ENST00000518723 ZNF726P1Q15940 193 aa7.68□□□□□ -1.18
TRAPPC9-204ENST00000518723 STPG4Q8N801 248 aa7.68□□□□□ -1.18
TRAPPC9-204ENST00000518723 PRSS3P2Q8NHM4 247 aa7.68□□□□□ -1.18
TRAPPC9-204ENST00000518723 SSBP4Q9BWG4 385 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC9-204ENST00000518723 IGLV4-60A0A075B6I1 120 aa7.67□□□□□ -1.18
TRAPPC9-204ENST00000518723 IGKV2-24A0A0C4DH68 120 aa7.67□□□□□ -1.18
TRAPPC9-204ENST00000518723 MUC21A0A0G2JKD1 596 aa7.67□□□□□ -1.18
TRAPPC9-204ENST00000518723 CTXND1A0A1B0GTU2 59 aa7.67□□□□□ -1.18
TRAPPC9-204ENST00000518723 A6NHS1 94 aa7.67□□□□□ -1.18
TRAPPC9-204ENST00000518723 CFAP161Q6P656 301 aa7.67□□□□□ -1.18
TRAPPC9-204ENST00000518723 LINC00299Q6ZSB3 139 aa7.67□□□□□ -1.18
TRAPPC9-204ENST00000518723 TCEAL7Q9BRU2 100 aa7.67□□□□□ -1.18
TRAPPC9-204ENST00000518723 GFRA4Q9GZZ7 299 aa7.67□□□□□ -1.18
TRAPPC9-204ENST00000518723 OR5AL1P0C617 328 aa7.66□□□□□ -1.18
TRAPPC9-204ENST00000518723 RAB5CP51148 216 aa7.66□□□□□ -1.18
TRAPPC9-204ENST00000518723 SPANXN1Q5VSR9 72 aa7.66□□□□□ -1.18
TRAPPC9-204ENST00000518723 LYPD6BQ8NI32 183 aa7.66□□□□□ -1.18
TRAPPC9-204ENST00000518723 AQP10Q96PS8 301 aa7.66□□□□□ -1.18
TRAPPC9-204ENST00000518723 TMEM243Q9BU79 118 aa7.66□□□□□ -1.18
TRAPPC9-204ENST00000518723 UPK1BO75841 260 aa7.65□□□□□ -1.18
TRAPPC9-204ENST00000518723 S100ZQ8WXG8 99 aa7.65□□□□□ -1.18
TRAPPC9-204ENST00000518723 KRTAP9-2Q9BYQ4 174 aa7.65□□□□□ -1.18
TRAPPC9-204ENST00000518723 LINC00474Q9P2X8 69 aa7.65□□□□□ -1.18
TRAPPC9-204ENST00000518723 A0A096LNI7 61 aa7.64□□□□□ -1.19
TRAPPC9-204ENST00000518723 M0QY20 66 aa7.64□□□□□ -1.19
TRAPPC9-204ENST00000518723 SMIM17P0DL12 118 aa7.64□□□□□ -1.19
TRAPPC9-204ENST00000518723 FHITP49789 147 aa7.64□□□□□ -1.19
TRAPPC9-204ENST00000518723 Q6ZRP5 223 aa7.64□□□□□ -1.19
TRAPPC9-204ENST00000518723 AP1S3Q96PC3 154 aa7.64□□□□□ -1.19
TRAPPC9-204ENST00000518723 GVQW2A0A096LPI5 108 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC9-204ENST00000518723 MUC21A0A140T8X8 626 aa7.63□□□□□ -1.19
TRAPPC9-204ENST00000518723 GAGE12HA6NDE8 117 aa7.63□□□□□ -1.19
TRAPPC9-204ENST00000518723 SULT1A2P50226 295 aa7.63□□□□□ -1.19
TRAPPC9-204ENST00000518723 IFITM3Q01628 133 aa7.63□□□□□ -1.19
TRAPPC9-204ENST00000518723 HIGD2BQ4VC39 106 aa7.63□□□□□ -1.19
TRAPPC9-204ENST00000518723 INO80EQ8NBZ0 244 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC9-204ENST00000518723 PGLYRP4Q96LB8 373 aa7.63□□□□□ -1.19
TRAPPC9-204ENST00000518723 NDUFA13Q9P0J0 144 aa7.63□□□□□ -1.19
TRAPPC9-204ENST00000518723 H7C1H1 209 aa7.62□□□□□ -1.19
TRAPPC9-204ENST00000518723 AKR1C3P42330 323 aa7.62□□□□□ -1.19
TRAPPC9-204ENST00000518723 MLST8Q9BVC4 326 aa7.62□□□□□ -1.19
TRAPPC9-204ENST00000518723 PKIGQ9Y2B9 76 aa7.62□□□□□ -1.19
TRAPPC9-204ENST00000518723 FAM231BA6NCW3 169 aa7.6□□□□□ -1.19
TRAPPC9-204ENST00000518723 UBE2L6O14933 153 aa7.6□□□□□ -1.19
TRAPPC9-204ENST00000518723 S100A9P06702 114 aaKnown RBP7.6□□□□□ -1.19
TRAPPC9-204ENST00000518723 NKX2-5P52952 324 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC9-204ENST00000518723 SSTP61278 116 aa7.6□□□□□ -1.19
TRAPPC9-204ENST00000518723 RPL7L1Q6DKI1 246 aaKnown RBP7.6□□□□□ -1.19
TRAPPC9-204ENST00000518723 SUMO4Q6EEV6 95 aa7.6□□□□□ -1.19
TRAPPC9-204ENST00000518723 STOML3Q8TAV4 291 aa7.6□□□□□ -1.19
TRAPPC9-204ENST00000518723 MED28Q9H204 178 aa7.6□□□□□ -1.19
TRAPPC9-204ENST00000518723 FAT4Q6V0I7 4981 aa7.59□□□□□ -1.19
TRAPPC9-204ENST00000518723 BORCS7-ASMTA0A0B4J1R7 106 aa7.59□□□□□ -1.19
TRAPPC9-204ENST00000518723 MAP1LC3B2A6NCE7 125 aa7.59□□□□□ -1.19
TRAPPC9-204ENST00000518723 MGPP08493 103 aa7.59□□□□□ -1.19
TRAPPC9-204ENST00000518723 DEFA3P59666 94 aa7.59□□□□□ -1.19
TRAPPC9-204ENST00000518723 AKR1C8PQ5T2L2 129 aa7.59□□□□□ -1.19
TRAPPC9-204ENST00000518723 CST9LP1Q5W188 147 aa7.59□□□□□ -1.19
TRAPPC9-204ENST00000518723 RASL11AQ6T310 242 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms