RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 IGLV5-52A0A0A0MRZ9 124 aa7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 C9JQL5 133 aa7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 SNAI2O43623 268 aa7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 OR5AL1P0C617 328 aa7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 RAB4BP61018 213 aa7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 RPL36AP83881 106 aaKnown RBP7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 PRR27Q6MZM9 219 aa7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 DAZ4Q86SG3 579 aaKnown RBP7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 Q8N3U1 123 aa7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 OR10AG1Q8NH19 301 aa7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 RPL36ALQ969Q0 106 aaKnown RBP7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 C11orf52Q96A22 123 aa7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 DAZ3Q9NR90 486 aaKnown RBP7.04□□□□□ -1.28
PDGFRB-203ENST00000517660 DNAH8Q96JB1 4490 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 TRBV7-3A0A075B6L6 115 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 UBE2D3P61077 147 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 UBE2D2P62837 147 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 SERTAD4-AS1Q5TG53 156 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 SPANXN1Q5VSR9 72 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 NIT1Q86X76 327 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 Q8N814 137 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 CLRN3Q8NCR9 226 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 OR10G8Q8NGN5 311 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 FRZBQ92765 325 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 COX11Q9Y6N1 276 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 URGCP-MRPS24S4R325 110 aa7.03□□□□□ -1.28
PDGFRB-203ENST00000517660 BCL2P10415 239 aa7.02□□□□□ -1.29
PDGFRB-203ENST00000517660 CEBPGP53567 150 aa7.02□□□□□ -1.29
PDGFRB-203ENST00000517660 ELOBQ15370 118 aa7.02□□□□□ -1.29
PDGFRB-203ENST00000517660 ZNF56Q15929 161 aa7.02□□□□□ -1.29
PDGFRB-203ENST00000517660 FAM74A3Q4VXF1 159 aa7.02□□□□□ -1.29
PDGFRB-203ENST00000517660 RMI2Q96E14 147 aa7.02□□□□□ -1.29
PDGFRB-203ENST00000517660 DAZAP1Q96EP5 407 aaKnown RBP7.02□□□□□ -1.29
PDGFRB-203ENST00000517660 CHCHD7Q9BUK0 85 aa7.02□□□□□ -1.29
PDGFRB-203ENST00000517660 DERL1Q9BUN8 251 aa7.02□□□□□ -1.29
PDGFRB-203ENST00000517660 A0A087WX48 190 aa7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 MUC21A0A0G2JKD1 596 aa7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 MUC21A0A140T8X8 626 aa7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 KRTAP29-1A8MX34 341 aaPredicted RBP7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 F5H697 171 aa7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 PDE6DO43924 150 aa7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 IGLV2-8P01709 118 aa7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 SMR3BP02814 79 aaPredicted RBP7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 SRP19P09132 144 aaKnown RBP7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 TAGLN2P37802 199 aaKnown RBP7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 RPS20P60866 119 aaKnown RBP7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 CENPWQ5EE01 88 aa7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 KCNIP4Q6PIL6 250 aa7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 LRP2P98164 4655 aa7.01□□□□□ -1.29
PDGFRB-203ENST00000517660 SMIM17P0DL12 118 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 GNG4P50150 75 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 SSTP61278 116 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 MEF2BQ02080 365 aaPredicted RBP7□□□□□ -1.29
PDGFRB-203ENST00000517660 CBLN2Q8IUK8 224 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 NEXN-AS1Q8NBZ9 246 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 SMIM12Q96EX1 92 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 RPS10P5Q9NQ39 176 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 VAX2Q9UIW0 290 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 KLK12Q9UKR0 248 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 PLA2G2DQ9UNK4 145 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 KIF25-AS1Q9Y6Z4 181 aa7□□□□□ -1.29
PDGFRB-203ENST00000517660 TRBV6-8A0A0A6YYG3 113 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 C19orf71A6NCJ1 209 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 TMEM262E9PQX1 116 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 WFDC2Q14508 124 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 RHEBQ15382 184 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 FER1L6-AS1Q8NA97 138 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 OR2D3Q8NGH3 330 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 AP1S3Q96PC3 154 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 TMEM70Q9BUB7 260 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 BIN3Q9NQY0 253 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 SMCO4Q9NRQ5 59 aa6.99□□□□□ -1.29
PDGFRB-203ENST00000517660 PKHD1L1Q86WI1 4243 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 IGKV2D-24A0A075B6R9 120 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 XKRY2A2RUG3 117 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 IGLC6P0CF74 106 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 GZMBP10144 247 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 CACNG7P62955 275 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 Q0VG73 95 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 TMEM97Q5BJF2 176 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 BAALCQ8WXS3 180 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 UBE2WQ96B02 151 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 TPPP3Q9BW30 176 aa6.98□□□□□ -1.29
PDGFRB-203ENST00000517660 C7orf77A4D0Y5 90 aa6.97□□□□□ -1.29
PDGFRB-203ENST00000517660 F2Z2F3 143 aa6.97□□□□□ -1.29
PDGFRB-203ENST00000517660 LECT2O14960 151 aa6.97□□□□□ -1.29
PDGFRB-203ENST00000517660 P01737 135 aa6.97□□□□□ -1.29
PDGFRB-203ENST00000517660 PKIAP61925 76 aa6.97□□□□□ -1.29
PDGFRB-203ENST00000517660 Q8N976 141 aa6.97□□□□□ -1.29
PDGFRB-203ENST00000517660 DNAJC30Q96LL9 226 aa6.97□□□□□ -1.29
PDGFRB-203ENST00000517660 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.3
PDGFRB-203ENST00000517660 H7C1H1 209 aa6.96□□□□□ -1.3
PDGFRB-203ENST00000517660 NDUFS6O75380 124 aaKnown RBP6.96□□□□□ -1.3
PDGFRB-203ENST00000517660 HAMPP81172 84 aa6.96□□□□□ -1.3
PDGFRB-203ENST00000517660 WDR73Q6P4I2 378 aa6.96□□□□□ -1.3
PDGFRB-203ENST00000517660 CHCHD5Q9BSY4 110 aa6.96□□□□□ -1.3
PDGFRB-203ENST00000517660 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 ZNF727A8MUV8 499 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 TMEM250H0YL14 139 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 FAM229AH3BQW9 127 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms