RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 TMEM141Q96I45 108 aa8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 TRAV8-4A0A0B4J246 113 aa8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 LEPROTO15243 131 aa8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 WFDC2Q14508 124 aa8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 LGALS1P09382 135 aaKnown RBP8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 AKAP13Q12802 2813 aa8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 NXPH4O95158 308 aa8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 NOP10Q9NPE3 64 aaKnown RBP8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
PCDHGA1-202ENST00000517417 NDUFA12Q9UI09 145 aa8.32□□□□□ -1.08
PCDHGA1-202ENST00000517417 PRSS29PA6NIE9 313 aa8.32□□□□□ -1.08
PCDHGA1-202ENST00000517417 C16orf54Q6UWD8 224 aa8.32□□□□□ -1.08
PCDHGA1-202ENST00000517417 U3KQE9 123 aa8.32□□□□□ -1.08
PCDHGA1-202ENST00000517417 POLQO75417 2590 aa8.32□□□□□ -1.08
PCDHGA1-202ENST00000517417 FOXI2Q6ZQN5 318 aa8.32□□□□□ -1.08
PCDHGA1-202ENST00000517417 FANCD2OSQ96PS1 177 aa8.32□□□□□ -1.08
PCDHGA1-202ENST00000517417 TMEM243Q9BU79 118 aa8.32□□□□□ -1.08
PCDHGA1-202ENST00000517417 U3KQK5 164 aa8.32□□□□□ -1.08
PCDHGA1-202ENST00000517417 IGKV2D-26A0A0A0MRZ7 120 aa8.31□□□□□ -1.08
PCDHGA1-202ENST00000517417 CLPSL2Q6UWE3 100 aa8.31□□□□□ -1.08
PCDHGA1-202ENST00000517417 LAMTOR3Q9UHA4 124 aa8.31□□□□□ -1.08
PCDHGA1-202ENST00000517417 LINC01548A6NM66 108 aa8.31□□□□□ -1.08
PCDHGA1-202ENST00000517417 FBXL19-AS1Q494R0 122 aa8.31□□□□□ -1.08
PCDHGA1-202ENST00000517417 C20orf78Q9BR46 151 aa8.31□□□□□ -1.08
PCDHGA1-202ENST00000517417 NBEAQ8NFP9 2946 aa8.31□□□□□ -1.08
PCDHGA1-202ENST00000517417 SPINK8P0C7L1 97 aa8.31□□□□□ -1.08
PCDHGA1-202ENST00000517417 DMXL2Q8TDJ6 3036 aa8.31□□□□□ -1.08
PCDHGA1-202ENST00000517417 LENEPQ9Y5L5 61 aa8.31□□□□□ -1.08
PCDHGA1-202ENST00000517417 DCHS1Q96JQ0 3298 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 TRBV12-3P01733 135 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 IGLC6P0CF74 106 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 FGF6P10767 208 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 UNQ9165/PRO28630Q6UXU0 137 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 J3QQQ9 107 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 PSCAO43653 123 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 A0A0J9YY99 117 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 IGKV2-29A2NJV5 120 aaPredicted RBP8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 RBAKDNA6NC62 111 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 GHRHP01286 108 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 GAGE2BQ13066 116 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 GAGE2EQ4V326 116 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 SIRPDQ9H106 197 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 GAGE2DQ9UEU5 116 aa8.3□□□□□ -1.08
PCDHGA1-202ENST00000517417 C19orf84I3L1E1 186 aa8.29□□□□□ -1.08
PCDHGA1-202ENST00000517417 IGHV4OR15-8A0A075B7B6 117 aa8.29□□□□□ -1.08
PCDHGA1-202ENST00000517417 A0A087WW49 117 aa8.29□□□□□ -1.08
PCDHGA1-202ENST00000517417 EPG5Q9HCE0 2579 aa8.28□□□□□ -1.08
PCDHGA1-202ENST00000517417 LMO4P61968 165 aa8.28□□□□□ -1.08
PCDHGA1-202ENST00000517417 UFSP1Q6NVU6 142 aa8.28□□□□□ -1.08
PCDHGA1-202ENST00000517417 ATMQ13315 3056 aa8.28□□□□□ -1.08
PCDHGA1-202ENST00000517417 ANGP03950 147 aaKnown RBP8.28□□□□□ -1.08
PCDHGA1-202ENST00000517417 A0A096LNJ9 63 aa8.28□□□□□ -1.08
PCDHGA1-202ENST00000517417 RNF185Q96GF1 192 aa8.28□□□□□ -1.08
PCDHGA1-202ENST00000517417 ZNF561-AS1K7EIQ3 104 aa8.27□□□□□ -1.09
PCDHGA1-202ENST00000517417 HIST1H4AP62805 103 aaKnown RBP8.27□□□□□ -1.09
PCDHGA1-202ENST00000517417 GAS8-AS1O95177 125 aa8.27□□□□□ -1.09
PCDHGA1-202ENST00000517417 IGHG2P01859 326 aa8.27□□□□□ -1.09
PCDHGA1-202ENST00000517417 RAI1Q7Z5J4 1906 aaPredicted RBP8.27□□□□□ -1.09
PCDHGA1-202ENST00000517417 Q8N1Y9 231 aa8.26□□□□□ -1.09
PCDHGA1-202ENST00000517417 ESM1Q9NQ30 184 aa8.26□□□□□ -1.09
PCDHGA1-202ENST00000517417 SRSF2Q01130 221 aaKnown RBP8.26□□□□□ -1.09
PCDHGA1-202ENST00000517417 SUMO4Q6EEV6 95 aa8.26□□□□□ -1.09
PCDHGA1-202ENST00000517417 PRO1854Q9UHT4 67 aa8.26□□□□□ -1.09
PCDHGA1-202ENST00000517417 APOC4P55056 127 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 MAPKAPK5-AS1Q8N8E1 139 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 PPDPFLQ8WWR9 84 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 XCL1P47992 114 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 MRGPRG-AS1Q2M3A8 158 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 TM2D2Q9BX73 214 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 E9PLD3 99 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 ZFAND6Q6FIF0 208 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 GAGE2AQ6NT46 116 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 SVIPQ8NHG7 77 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 A0A0J9YXV3 536 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 RPL39P62891 51 aaKnown RBP8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 MRAPQ8TCY5 172 aa8.25□□□□□ -1.09
PCDHGA1-202ENST00000517417 SMAD5-AS1Q9Y6J3 95 aa8.24□□□□□ -1.09
PCDHGA1-202ENST00000517417 LY6LH3BQJ8 138 aa8.24□□□□□ -1.09
PCDHGA1-202ENST00000517417 SPANXB1Q9NS25 103 aaPredicted RBP8.24□□□□□ -1.09
PCDHGA1-202ENST00000517417 TRAV12-1A0A0B4J245 112 aa8.24□□□□□ -1.09
PCDHGA1-202ENST00000517417 MRPS12O15235 138 aaKnown RBP8.24□□□□□ -1.09
PCDHGA1-202ENST00000517417 C5orf38Q86SI9 138 aa8.24□□□□□ -1.09
PCDHGA1-202ENST00000517417 TMEM61Q8N0U2 210 aa8.24□□□□□ -1.09
PCDHGA1-202ENST00000517417 TNFRSF13BO14836 293 aaPredicted RBP8.23□□□□□ -1.09
PCDHGA1-202ENST00000517417 Q6ZQT7 251 aa8.23□□□□□ -1.09
PCDHGA1-202ENST00000517417 ZNF843Q8N446 348 aa8.23□□□□□ -1.09
PCDHGA1-202ENST00000517417 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
PCDHGA1-202ENST00000517417 SS18L2Q9UHA2 77 aa8.23□□□□□ -1.09
PCDHGA1-202ENST00000517417 RHOHQ15669 191 aa8.23□□□□□ -1.09
PCDHGA1-202ENST00000517417 CCDC140Q96MF4 163 aa8.23□□□□□ -1.09
PCDHGA1-202ENST00000517417 HERVK_113P63121 156 aa8.23□□□□□ -1.09
PCDHGA1-202ENST00000517417 C9orf47Q6ZRZ4 202 aa8.23□□□□□ -1.09
PCDHGA1-202ENST00000517417 ZFP2Q6ZN57 461 aa8.22□□□□□ -1.09
PCDHGA1-202ENST00000517417 GPHB5Q86YW7 130 aa8.22□□□□□ -1.09
PCDHGA1-202ENST00000517417 PIFOQ8TCI5 191 aa8.22□□□□□ -1.09
PCDHGA1-202ENST00000517417 ACANP16112 2415 aa8.22□□□□□ -1.09
PCDHGA1-202ENST00000517417 BAALCQ8WXS3 180 aa8.22□□□□□ -1.09
PCDHGA1-202ENST00000517417 TOMM6Q96B49 74 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms